Factsheet for GSMUA_Achr3P00890_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr2P08110_001
GSMUA_Achr6P25560_001
GSMUA_Achr9P08680_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G32070.1	GSMUA_Achr10P...	AT4G09570.1	19130088
AT4G32070.1	GSMUA_Achr2P08110_001	AT4G09570.1	19130088
AT4G32070.1	GSMUA_Achr6P25560_001	AT4G09570.1	19130088
AT4G32070.1	GSMUA_Achr9P08680_001	AT4G09570.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P20360_001	Banana	cytosol	74.11	74.33
GSMUA_Achr7P05370_001	Banana	cytosol	68.75	70.86
KRG84467	Soybean	cytosol	13.1	67.69
GSMUA_Achr9P22500_001	Banana	cytosol	62.35	60.81
Os09t0556200-00	Rice	cytosol, plasma membrane	62.05	60.79
Zm00001d021400_P001	Maize	cytosol	61.31	59.97
GSMUA_Achr4P04120_001	Banana	cytosol	45.68	59.96
EER97166	Sorghum	cytosol	61.01	59.25
VIT_11s0118g00490.t01	Wine grape	cytosol	59.67	59.14
KRH05201	Soybean	cytosol	26.49	59.14
TraesCS5A01G357000.1	Wheat	cytosol	59.23	57.27
TraesCS5D01G366100.1	Wheat	cytosol	59.23	57.27
TraesCS5B01G359500.1	Wheat	cytosol	59.08	56.96
HORVU5Hr1G088290.2	Barley	cytosol	58.78	56.67
Solyc08g029190.2.1	Tomato	nucleus	55.65	55.9
PGSC0003DMT400038437	Potato	cytosol	55.36	55.69
PGSC0003DMT400049152	Potato	cytosol	55.36	55.69
Solyc06g065910.2.1	Tomato	cytosol	55.8	54.74
PGSC0003DMT400067142	Potato	cytosol	55.21	54.16
VIT_04s0008g06310.t01	Wine grape	mitochondrion	58.93	52.73
KRH37816	Soybean	cytosol	54.91	50.55
Solyc07g007390.2.1	Tomato	nucleus	58.48	50.51
KRH20222	Soybean	nucleus	54.17	50.28
CDX68815	Canola	cytosol, nucleus, plastid	51.04	50.22
KRH61724	Soybean	cytosol	54.17	50.14
CDY38510	Canola	nucleus	51.34	49.57
KRH03587	Soybean	nucleus	53.42	49.52
CDY58928	Canola	cytosol	50.89	48.93
KRH52396	Soybean	cytosol	7.44	48.54
CDY11535	Canola	nucleus	50.89	48.44
CDX83226	Canola	cytosol	51.79	48.33
PGSC0003DMT400078952	Potato	cytosol	58.18	48.21
CDX75218	Canola	cytosol	51.79	48.0
Bra011320.1-P	Field mustard	cytosol, nucleus, plastid	51.04	47.51
Zm00001d024424_P001	Maize	cytosol	52.08	47.23
CDX72344	Canola	nucleus	49.26	47.15
AT2G25290.4	Thale cress	cytosol	51.93	46.85
Bra023964.1-P	Field mustard	nucleus	50.15	46.35
CDY13473	Canola	nucleus	49.55	46.06
Bra007805.1-P	Field mustard	nucleus	51.64	45.96
Os08t0296900-01	Rice	cytosol	52.68	45.74
Bra000549.1-P	Field mustard	nucleus	51.79	45.49
AT4G32070.1	Thale cress	nucleus	52.53	45.14
EES13437	Sorghum	cytosol	49.7	44.95
Zm00001d037923_P001	Maize	cytosol	10.71	44.44
CDX70924	Canola	cytosol	38.69	40.82
CDY51850	Canola	cytosol	38.54	40.72
Bra006557.1-P	Field mustard	cytosol	38.69	39.1
KRH05202	Soybean	cytosol	19.79	38.22
EER96429	Sorghum	plastid	52.23	37.78
Zm00001d019666_P001	Maize	plastid	51.79	37.54
TraesCS5B01G160600.1	Wheat	cytosol	51.64	37.11
TraesCS5A01G163200.1	Wheat	cytosol	51.49	37.01
TraesCS5D01G168200.1	Wheat	cytosol	51.49	37.01
GSMUA_Achr1P18260_001	Banana	nucleus	38.1	36.26
HORVU5Hr1G050890.1	Barley	cytosol	50.6	36.25
AT5G20360.1	Thale cress	cytosol	42.26	35.11
TraesCS5D01G165100.1	Wheat	cytosol	15.33	26.75
HORVU5Hr1G050130.1	Barley	cytosol	15.48	26.2
TraesCS5B01G157700.1	Wheat	cytosol	15.77	25.0
TraesCS5A01G160000.1	Wheat	cytosol	14.58	24.75

Protein Annotations

Gene3D:1.25.40.10	MapMan:20.2.4.5	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
EnsemblPlantsGene:GSMUA_Achr3G00890_001	EnsemblPlants:GSMUA_Achr3P00890_001	EnsemblPlants:GSMUA_Achr3T00890_001	InterPro:IPR000270	InterPro:IPR011990	InterPro:IPR013026
InterPro:IPR019734	UniProt:M0SAQ7	InterPro:PB1_dom	PFAM:PF00564	PFscan:PS50005	PFscan:PS50293
PFscan:PS51745	PANTHER:PTHR22904	PANTHER:PTHR22904:SF419	SMART:SM00028	SMART:SM00666	SUPFAM:SSF48452
SUPFAM:SSF54277	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI000296D113	SEG:seg

Description

octicosapeptide/Phox/Bem1p, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G00890_001]

Coordinates

chr3:+:677386..680062

Molecular Weight (calculated)

77155.8 Da

IEP (calculated)

5.892

GRAVY (calculated)

-0.488

Length

672 amino acids

Sequence
(BLAST)

001: MGKPPAKKKS SGGKLNDATL KHCKSCDYSS KVFDEDTTIF MDMARDMKEE GNKLFQKREY DRALLKYEKA IKLLPKNHID VAYLHSNMAA CYMQMSPEEY
101: HQAISECNLA LEVSPKYSKA LLKRAKCFEA LNRLELACKD IDLVLSLEPN NLTATEISKR VKEEMERKGI TLDDKTLFPL PEPLTVKEKP KKKKCHKSEE
201: KVVVVEEKHA KVKEEPMKSI KLVFGEDIRC AQIPANCTML QLREIVVNKF PSLKAVLIKY KDKEGDLVTI TTSDELRWAE ESSEPQGSVR LHIIEVDPEH
301: DPLLVEAKKE SSRKLDRSIS RNRSIKCDDI KVSSVCVDDW IVQFAQLFKN HVGFNSDAYL NLHELGMKLY SGAMEETVTS EEAQEIFELA EEKFQEMAAL
401: ALFNWGNVHM SRARKRLFLS ENASKESMLA QVKASYDWAQ GEYIKAGQRY DEALKIKPDF CEALLALGLQ HFEQAKLSWC YAIGSKADLE KWPSSEVLEL
501: FNHAEDNIEK GTEMWEEIEE QRLKELNKAN EERILLQKMG LEDYFIELSN NEAAEQAYNM RAQINLLWGT MLYERSVVEF KLGIPMWEEC LMAAVEKFNL
601: AGASPTDVAV MIKSHCANET AQEGFGFKID EIVQAWDEMH DARRWINGVS SFRLEPLLRR RAPKLHHMLE HA

Best Arabidopsis Sequence Match ( AT2G25290.2 )
(BLAST)

001: MGKPTGKKKN NNYTEMPPTE SSTTGGGKTG KSFDRSATKS FDDDMTIFIN RALELKEEGN KLFQKRDYEG AMFRYDKAVK LLPRDHGDVA YLRTSMASCY
101: MQMGLGEYPN AINECNLALE ASPRFSKALL KRARCYEALN KLDFAFRDSR VVLNMEPENV SANEIFERVK KVLVGKGIDV DEMEKNLVNV QPVGAARLRK
201: IVKERLRKKK KKSMTMTNGG NDGERKSVEA VVEDAKVDNG EEVDSGRKGK AIEEKKLEDK VAVMDKEVIA SEIKEDATVT RTVKLVHGDD IRWAQLPLDS
301: SVVLVRDVIK DRFPALKGFL IKYRDSEGDL VTITTTDELR LAASTREKLG SFRLYIAEVS PNQEPTYDVI DNDESTDKFA KGSSSVADNG SVGDFVESEK
401: ASTSLEHWIF QFAQLFKNHV GFDSDSYLEL HNLGMKLYTE AMEDIVTGED AQELFDIAAD KFQEMAALAM FNWGNVHMSK ARRQIYFPED GSRETILEKV
501: EAGFEWAKNE YNKAAEKYEG AVKIKSDFYE ALLALGQQQF EQAKLCWYHA LSGEVDIESD ASQDVLKLYN KAEESMEKGM QIWEEMEERR LNGISNFDKH
601: KELLQKLGLD GIFSEASDEE SAEQTANMSS QINLLWGSLL YERSIVEYKL GLPTWDECLE VAVEKFELAG ASATDIAVMV KNHCSSDNAL EGMGFKIDEI
701: VQAWNEMYDA KRWQIGVPSF RLEPLFRRRS PKLHDILENV FSGPQ

Arabidopsis Description

Phox1Phox1 [Source:UniProtKB/TrEMBL;Acc:A0A178VW51]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.