CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EES09373
EES16732

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G32070.1	EES09373	AT4G09570.1	19130088
AT4G32070.1	EES16732	AT4G09570.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024424_P001	Maize	cytosol	75.24	75.44
Os08t0296900-01	Rice	cytosol	63.66	61.11
KRG84467	Soybean	cytosol	10.5	60.0
KRH05201	Soybean	cytosol	22.48	55.48
GSMUA_Achr7P05370_001	Banana	cytosol	46.16	52.61
GSMUA_Achr4P20360_001	Banana	cytosol	47.11	52.24
EER97166	Sorghum	cytosol	47.11	50.58
GSMUA_Achr4P04120_001	Banana	cytosol	34.72	50.39
VIT_11s0118g00490.t01	Wine grape	cytosol	45.63	50.0
GSMUA_Achr3P00890_001	Banana	cytosol	44.95	49.7
Solyc08g029190.2.1	Tomato	nucleus	42.93	47.68
PGSC0003DMT400038437	Potato	cytosol	42.53	47.31
PGSC0003DMT400049152	Potato	cytosol	42.53	47.31
CDX68815	Canola	cytosol, nucleus, plastid	43.34	47.14
CDY58928	Canola	cytosol	43.74	46.49
CDY11535	Canola	nucleus	44.15	46.46
GSMUA_Achr9P22500_001	Banana	cytosol	42.93	46.3
Solyc06g065910.2.1	Tomato	cytosol	41.99	45.55
PGSC0003DMT400067142	Potato	cytosol	41.72	45.26
VIT_04s0008g06310.t01	Wine grape	mitochondrion	45.63	45.14
CDY38510	Canola	nucleus	41.86	44.68
CDX75218	Canola	cytosol	43.47	44.55
CDX72344	Canola	nucleus	41.99	44.44
Bra011320.1-P	Field mustard	cytosol, nucleus, plastid	43.07	44.32
KRH03587	Soybean	nucleus	43.2	44.28
KRH20222	Soybean	nucleus	42.93	44.06
CDY13473	Canola	nucleus	42.66	43.85
KRH61724	Soybean	cytosol	42.4	43.39
Bra023964.1-P	Field mustard	nucleus	42.4	43.33
CDX83226	Canola	cytosol	41.86	43.19
Solyc07g007390.2.1	Tomato	nucleus	45.22	43.19
Bra007805.1-P	Field mustard	nucleus	43.88	43.18
AT2G25290.4	Thale cress	cytosol	43.07	42.95
KRH37816	Soybean	cytosol	41.99	42.74
PGSC0003DMT400078952	Potato	cytosol	44.82	41.06
Bra000549.1-P	Field mustard	nucleus	42.26	41.05
AT4G32070.1	Thale cress	nucleus	42.66	40.54
EER96429	Sorghum	plastid	48.45	38.75
CDY51850	Canola	cytosol	29.34	34.28
CDX70924	Canola	cytosol	29.21	34.07
KRH52396	Soybean	cytosol	4.71	33.98
Bra006557.1-P	Field mustard	cytosol	29.74	33.23
KRH05202	Soybean	cytosol	14.54	31.03
AT5G20360.1	Thale cress	cytosol	32.57	29.91
EES00364	Sorghum	plastid	31.09	29.62
TraesCS5D01G165100.1	Wheat	cytosol	14.0	27.01
HORVU5Hr1G050130.1	Barley	cytosol	13.73	25.69
TraesCS5B01G157700.1	Wheat	cytosol	12.52	21.93
TraesCS5A01G160000.1	Wheat	cytosol	11.57	21.72

Protein Annotations

Gene3D:1.25.40.10	MapMan:20.2.4.5	Gene3D:3.10.20.90	EntrezGene:8069674	UniProt:C5YHV6	EnsemblPlants:EES13437
ProteinID:EES13437	ProteinID:EES13437.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000270
InterPro:IPR011990	InterPro:IPR013026	InterPro:PB1_dom	PFAM:PF00564	PFscan:PS50293	PFscan:PS51745
PANTHER:PTHR22904	PANTHER:PTHR22904:SF332	SMART:SM00666	EnsemblPlantsGene:SORBI_3007G060000	SUPFAM:SSF48452	SUPFAM:SSF54277
InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	UniParc:UPI0001A874D0	RefSeq:XP_002443942.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr7:+:6259622..6264942

Molecular Weight (calculated)

84347.7 Da

IEP (calculated)

5.649

GRAVY (calculated)

-0.571

Length

743 amino acids

Sequence
(BLAST)

001: MGKPPGAKNP PSDGDEAVFL ELSRELKDEA TRLFNRGDFE GAAFKYDKAA RLLPAGPRVE AARLRASVAQ CYMRMRPAEF HRGIHECNLA LEAAPRYSRA
101: LLRRAACFEA LGRADLAWGD VRTVLRWEPG NRAARQISER VRKALEEKGV SVALDDEDVV QPEDEDEFGS AKGEEKSKKS HDKRLDSVAV EKKGVNGNHI
201: AAPLDSASTE KQADLRQTNG IGNHQHHTED SESNGLEKLE QSNMGNKRGG HTAGKKPRHG ESKQQKHSAV KPVNHCEDNI GVKEEAMKDV KLVFGEDIRC
301: ARMPVNCSLS QLREIVQNKF PSLKAFLIKY KDKEEDLVTI TSSEELSWAS NLADLEGPIR LYVAEVNPVQ ELGVDCVRRR PSFATLERNR DIMLDNGTVW
401: HDVEHKYHAD DWMVQFAQII KNHVGFSSDA YLDLHDLGQR LYYEAMEDAI ESEEAQEMFE VAESKFQEMA ALALFNCGNV HMSRARKRPC LPEDSLQEFI
501: LEQVKVSYDW ACTEYAKAGA MFDEAVKTKS EFFEGLIALG QQQFEQAKLS WYYALAFKIN METEVLELFN HAEDNMEKGM DIWERMETLR LRGLSKPSKD
601: KVVLEKMVSE GFVKDISADE TFEETSSIRS HIYILWGTIL YERSVVEFNL GLPSWEESLT VAMEKFKIGG ASQADINVIV KNHCANETTQ EGLSFKVEEI
701: VQAWNEMYDA KSWRSGPLSF RLQPIFRRRA PKLHHILEHL HYA

Best Arabidopsis Sequence Match ( AT4G32070.1 )
(BLAST)

001: MGKPTAKKKN PETPKDASGG GGGGGGKSGK TYHRSTSRVF DEDMEIFISR ALELKEEGNK LFQKRDHEGA MLSFDKALKL LPKDHIDVAY LRTSMASCYM
101: QMGLGEYPNA ISECNLALEA SPRYSKALVR RSRCYEALNK LDYAFRDARI VLNMEPGNVS ANEIFDRVKK VLVDKGIDVD EMEKDFVDVQ PVCAARLKKI
201: VKERLRKSKK KKKSGGKDEE LKSPKVVVVD KGDEAEGRNK PKEEKSDKSD IDGKIGGKRE EKKTSFKSDK GQKKKSGGNK AGEERKVEDK VVVMDKEVIA
301: SEIVDGGGSK KEGATVTRTI KLVHGDDIRW AQLPLDSTVR LVRDVIRDRF PALRGFLIKY RDTEGDLVTI TTTDELRLAA STHDKLGSLR LYIAEVNPDQ
401: EPTYDGMSNT ESTDKVSKRL SSLADNGSVG EYVGSDKASG CFENWIFQFA QLFKNHVGFD SDSYVDLHDL GMKLYTEAME DAVTGEDAQE LFQIAADKFQ
501: EMGALALLNW GNVHMSKARK QVCIPEDASR EAIIEAVEAA FVWTQNEYNK AAEKYEEAIK VKPDFYEALL ALGQEQFEHA KLCWYHALKS KVDLESEASQ
601: EVLKLYNKAE DSMERGMQIW EEMEECRLNG ISKLDKHKNM LRKLELDELF SEASEEETVE QTANMSSQIN LLWGSLLYER SIVEYKLGLP TWDECLEVAV
701: EKFELAGASA TDIAVMVKNH CSSESALEGM GFKIDEIVQA WNEMYDAKRW QMGVPSFRLE PMFRRRAPKL HDILENVFSG PV

Arabidopsis Description

Phox4Protein PHOX4 [Source:UniProtKB/Swiss-Prot;Acc:F4JTI1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.