Factsheet for PGSC0003DMT400038437

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400002331
PGSC0003DMT400067082

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G32070.1	PGSC0003DMT400002331	AT4G09570.1	19130088
AT4G32070.1	PGSC0003DMT400067082	AT4G09570.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400049152	Potato	cytosol	100.0	100.0
Solyc08g029190.2.1	Tomato	nucleus	91.02	90.88
KRG84467	Soybean	cytosol	14.52	74.62
PGSC0003DMT400067142	Potato	cytosol	70.81	69.05
KRH05201	Soybean	cytosol	29.04	64.45
KRH52396	Soybean	cytosol	9.73	63.11
VIT_04s0008g06310.t01	Wine grape	mitochondrion	67.96	60.45
KRH61724	Soybean	cytosol	62.87	57.85
CDX68815	Canola	cytosol, nucleus, plastid	57.48	56.22
GSMUA_Achr4P20360_001	Banana	cytosol	55.99	55.82
GSMUA_Achr3P00890_001	Banana	cytosol	55.69	55.36
CDY58928	Canola	cytosol	57.48	54.94
GSMUA_Achr7P05370_001	Banana	cytosol	53.44	54.75
CDY11535	Canola	nucleus	57.78	54.67
CDY38510	Canola	nucleus	56.29	54.02
Os09t0556200-00	Rice	cytosol, plasma membrane	55.09	53.64
CDX75218	Canola	cytosol	58.08	53.52
Bra011320.1-P	Field mustard	cytosol, nucleus, plastid	57.63	53.32
Zm00001d021400_P001	Maize	cytosol	54.49	52.98
CDX72344	Canola	nucleus	55.54	52.85
CDX83226	Canola	cytosol	56.89	52.78
EER97166	Sorghum	cytosol	54.19	52.31
CDY13473	Canola	nucleus	56.44	52.14
Bra023964.1-P	Field mustard	nucleus	55.84	51.31
AT2G25290.4	Thale cress	cytosol	56.89	51.01
Bra007805.1-P	Field mustard	nucleus	57.48	50.86
GSMUA_Achr4P04120_001	Banana	cytosol	38.92	50.78
TraesCS5D01G366100.1	Wheat	cytosol	52.69	50.65
TraesCS5A01G357000.1	Wheat	cytosol	52.69	50.65
TraesCS5B01G359500.1	Wheat	cytosol	52.54	50.36
HORVU5Hr1G088290.2	Barley	cytosol	52.54	50.36
Bra000549.1-P	Field mustard	nucleus	57.19	49.93
AT4G32070.1	Thale cress	nucleus	57.93	49.49
GSMUA_Achr9P22500_001	Banana	cytosol	50.75	49.2
PGSC0003DMT400078952	Potato	cytosol	57.93	47.72
KRH05202	Soybean	cytosol	23.2	44.54
Os08t0296900-01	Rice	cytosol	50.6	43.67
EES13437	Sorghum	cytosol	47.31	42.53
Zm00001d024424_P001	Maize	cytosol	46.56	41.97
Zm00001d037923_P001	Maize	cytosol	9.73	40.12
EER96429	Sorghum	plastid	48.2	34.66
PGSC0003DMT400043113	Potato	cytosol	40.12	34.45
Zm00001d019666_P001	Maize	plastid	47.6	34.3
TraesCS5B01G160600.1	Wheat	cytosol	47.9	34.22
PGSC0003DMT400055266	Potato	cytosol	39.52	34.2
TraesCS5D01G168200.1	Wheat	cytosol	47.75	34.12
TraesCS5A01G163200.1	Wheat	cytosol	47.6	34.01
HORVU5Hr1G050890.1	Barley	cytosol	46.26	32.94
TraesCS5A01G160000.1	Wheat	cytosol	14.22	23.99
TraesCS5D01G165100.1	Wheat	cytosol	13.77	23.9
TraesCS5B01G157700.1	Wheat	cytosol	14.82	23.35
HORVU5Hr1G050130.1	Barley	cytosol	13.77	23.17

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:102599124	EntrezGene:102606312	MapMan:20.2.4.5	Gene3D:3.10.20.90	ncoils:Coil
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000270	InterPro:IPR011990	InterPro:IPR013026
InterPro:IPR019734	UniProt:M1B6V5	InterPro:PB1_dom	PFAM:PF00564	EnsemblPlantsGene:PGSC0003DMG400014835	PGSC:PGSC0003DMG400014835
EnsemblPlants:PGSC0003DMT400038437	PFscan:PS50005	PFscan:PS50293	PFscan:PS51745	PANTHER:PTHR22904	PANTHER:PTHR22904:SF419
SMART:SM00028	SMART:SM00666	SUPFAM:SSF48452	SUPFAM:SSF54277	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf
InterPro:TPR_repeat	UniParc:UPI0002959DD1	RefSeq:XP_006343517.1	RefSeq:XP_006368045.1	SEG:seg	:

Description

Heat shock protein 70 (HSP70)-interacting protein [Source:PGSC_GENE;Acc:PGSC0003DMG400014835]

Coordinates

chr8:-:18017000..18024628

Molecular Weight (calculated)

76357.4 Da

IEP (calculated)

4.986

GRAVY (calculated)

-0.450

Length

668 amino acids

Sequence
(BLAST)

001: MGKPTGKKKT QIISANVKHG TSKAFDEDTA VFITMSQELK EEGNKLFQKH DHEGSMLKYE KALNLLPPNH IDVAYLHTNM AACYMQIGLG DYPRAITECN
101: LALQVAPKYT KALMKRAKCY QSLNRLELAL RDVNLVLSIE PNNLTALDIA GALEQKGVKI EELEVVVEPP VSTKVVKSTK KSNKFDRKKV EENKVVVEEK
201: RSVKEEKIVT RTVKLVFEED IRWAQLPVDC SIRLVRDIVL DRFPNLKGAL IKYRDQEGDL VTITTTDELR LVESSAASQT SLRLYVVQVT PDKEPVYEGM
301: SGEEDMNSSS YKSTIVTDDG HLEKERQLNK GTTCVEDWII QFARLFKNHV GFDCDPYLDL HEIGMKLYCE TMEDTVTGEE AQELFGIAAA KFQEMAALSL
401: FNWGNVHMSR ARKRVYFTED GSRESLLKQV KSAYDWAEKE YEMAGSRYGE ALRLKPDFYE GLLALGQQQF EHAKLSWYYL IGSKVELETG TCAEILELYN
501: KAEDSMERGT EMWEEMEEQR LNGLSKNDEY KALLQKMGLD GLLKDKPAEE SEEQAANMRS QIYLLWGTML YERSVVEFKL GLPTWEECLE VAMEKFELAG
601: ASQIDIAVMI KNHCSNETAL EGFKVDEIVQ AWKEMYDTNR WQTGVPAFRL EPLFRRRVSN LHTVLENL

Best Arabidopsis Sequence Match ( AT2G25290.2 )
(BLAST)

001: MGKPTGKKKN NNYTEMPPTE SSTTGGGKTG KSFDRSATKS FDDDMTIFIN RALELKEEGN KLFQKRDYEG AMFRYDKAVK LLPRDHGDVA YLRTSMASCY
101: MQMGLGEYPN AINECNLALE ASPRFSKALL KRARCYEALN KLDFAFRDSR VVLNMEPENV SANEIFERVK KVLVGKGIDV DEMEKNLVNV QPVGAARLRK
201: IVKERLRKKK KKSMTMTNGG NDGERKSVEA VVEDAKVDNG EEVDSGRKGK AIEEKKLEDK VAVMDKEVIA SEIKEDATVT RTVKLVHGDD IRWAQLPLDS
301: SVVLVRDVIK DRFPALKGFL IKYRDSEGDL VTITTTDELR LAASTREKLG SFRLYIAEVS PNQEPTYDVI DNDESTDKFA KGSSSVADNG SVGDFVESEK
401: ASTSLEHWIF QFAQLFKNHV GFDSDSYLEL HNLGMKLYTE AMEDIVTGED AQELFDIAAD KFQEMAALAM FNWGNVHMSK ARRQIYFPED GSRETILEKV
501: EAGFEWAKNE YNKAAEKYEG AVKIKSDFYE ALLALGQQQF EQAKLCWYHA LSGEVDIESD ASQDVLKLYN KAEESMEKGM QIWEEMEERR LNGISNFDKH
601: KELLQKLGLD GIFSEASDEE SAEQTANMSS QINLLWGSLL YERSIVEYKL GLPTWDECLE VAVEKFELAG ASATDIAVMV KNHCSSDNAL EGMGFKIDEI
701: VQAWNEMYDA KRWQIGVPSF RLEPLFRRRS PKLHDILENV FSGPQ

Arabidopsis Description

Phox1Phox1 [Source:UniProtKB/TrEMBL;Acc:A0A178VW51]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.