Factsheet for PGSC0003DMT400055266

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g036360.1.1	Tomato	nucleus	94.3	95.66
VIT_00s0787g00010.t01	Wine grape	cytosol	15.41	83.8
VIT_00s1384g00010.t01	Wine grape	cytosol	6.35	81.67
PGSC0003DMT400043113	Potato	cytosol	79.92	79.31
KRH02008	Soybean	nucleus	69.95	69.59
KRH51148	Soybean	cytosol	66.84	67.1
AT1G62390.1	Thale cress	plastid	61.14	62.85
VIT_02s0012g02600.t01	Wine grape	cytosol	12.69	62.82
CDY69227	Canola	cytosol	37.31	59.88
GSMUA_Achr1P18260_001	Banana	nucleus	51.55	56.37
CDY30038	Canola	cytosol, plastid	60.23	56.3
VIT_00s1008g00010.t01	Wine grape	cytosol	16.97	55.98
VIT_17s0000g03920.t01	Wine grape	cytosol	14.38	55.5
Bra019727.1-P	Field mustard	cytosol	59.84	54.29
TraesCS5D01G170500.1	Wheat	nucleus	52.07	51.54
TraesCS5A01G164700.1	Wheat	nucleus, plastid	52.2	51.47
TraesCS5B01G163300.1	Wheat	nucleus, plastid	51.94	51.08
Zm00001d039966_P001	Maize	plastid	51.42	50.83
EES00364	Sorghum	plastid	50.52	50.0
Os09t0135400-01	Rice	nucleus	50.78	49.87
HORVU5Hr1G051200.1	Barley	mitochondrion	52.07	49.63
PGSC0003DMT400049152	Potato	cytosol	34.2	39.52
PGSC0003DMT400038437	Potato	cytosol	34.2	39.52
PGSC0003DMT400067142	Potato	cytosol	33.03	37.23
PGSC0003DMT400078952	Potato	cytosol	34.2	32.55

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:102602390	MapMan:20.2.4.5	Gene3D:3.10.20.90	ncoils:Coil	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR000270	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734
UniProt:M1BXP4	InterPro:PB1_dom	PFAM:PF00564	EnsemblPlantsGene:PGSC0003DMG400021460	PGSC:PGSC0003DMG400021460	EnsemblPlants:PGSC0003DMT400055266
PFscan:PS50005	PFscan:PS50293	PFscan:PS51745	PANTHER:PTHR22904	PANTHER:PTHR22904:SF437	SMART:SM00028
SMART:SM00666	SUPFAM:SSF48452	SUPFAM:SSF54277	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat
UniParc:UPI00029488BF	RefSeq:XP_006350463.1	SEG:seg	:	:	:

Description

Heat shock protein 70 (HSP70)-interacting protein [Source:PGSC_GENE;Acc:PGSC0003DMG400021460]

Coordinates

chr2:-:17745567..17748413

Molecular Weight (calculated)

85681.3 Da

IEP (calculated)

5.144

GRAVY (calculated)

-0.566

Length

772 amino acids

Sequence
(BLAST)

001: MGKSGGRKKK GQNQNQNQGE NHKPVVNGTV DLDSSIFLKR AHELKEEGNK RFQVKDYVGA LQQYDNALKL TPKTHPERAV FHSNRAACMM QMKPIDYDSV
101: ISECTMALQV QPRFVRALLR RARALEAVGK YEMAMQDVQM LLDADGNHQD ALEIAGRLSM ILGPRQDAQQ DLQSRPSPAA LGASAVGAAS IAGLGPCLPS
201: RSISKKTVPS TGATVVSVNS KPDKPSHVMP AENGTQAKVQ LPRVSLKPST GPSKPNVSPS RDDQKEHAST SASITVHGHS KEAVIRWRPL KLVYDHDIRL
301: AQMPVNCSFR VLRDIVMKRF PMSKSVLVKY KDSDSDLVTI TCTAELRLAE SWVDSLVPKD PDADEGDFIG MLRLHIVEVS PEQEPVLLEE EERPVESEEN
401: IADESVSHSS LSDSVVETLD SEINKSEKDI TKEKTTTEDP ECKEVEMDDW LFEFAQLLRT HLGIDPDAHI DLHELGMELS SEALEETVTS EAAQALFDKA
501: ALKFQEVAAL AFFNWGNVHM CAARKRMPID DSASKETMAT KLQAAYDWVK EKYSLAKEKY EEALSIKPDF YEGLLALGQQ QFEMAKLHWS FVLAKKEDLS
601: SWDRTETLAL FESAEEKMKA ATQMWEKLEE LRANELKDPS TSKKDELLRR KKKQGTGPEG EVSATGGPGE ISADEAAQQA AVMRSQIHLF WGNMLFERSQ
701: VECKLGLTGW KENLDTAVER FKLAGASDID ISTVLKNHCS NEEATQGSQE MVESLKTEGN DNPNDKNDAS KA

Best Arabidopsis Sequence Match ( AT1G62390.1 )
(BLAST)

001: MGKSGGRKKK SGGSNSNSSQ VNSSETSGLS KPSTIVNGGV DFDASIFLKR AHELKEEGNK KFQARDYVGA LEQYENGIKL IPKSHPDRAV FHSNRAACLM
101: QMKPIDYESV ISECSMALKS QPGFTRALLR RARAFEAVGK FDLAVQDVNV LLGSDPNHKD AGEISKRLKT ALGPHQDLQS RPSPAALGAS AALGGPIAGL
201: GPCLPSRNVH KKGVTSPVGS VSLPNASNGK VERPQVVNPV TENGGSVSKG QASRVVLKPV SHSPKGSKVE ELGSSSVAVV GKVQEKRIRW RPLKFVYDHD
301: IRLGQMPVNC RFKELREIVS SRFPSSKAVL IKYKDNDGDL VTITSTAELK LAESAADCIL TKEPDTDKSD SVGMLRLHVV DVSPEQEPML LEEEEEEVEE
401: KPVIEEVISS PTESLSETEI NTEKTDKEVE KEKASSSEDP ETKELEMDDW LFDFAHLFRT HVGIDPDAHI DLHELGMELC SEALEETVTS EKAQPLFDKA
501: SAKFQEVAAL AFFNWGNVHM CAARKRIPLD ESAGKEVVAA QLQTAYEWVK ERYTLAKEKY EQALSIKPDF YEGLLALGQQ QFEMAKLHWS YLLAQKIDIS
601: GWDPSETLNL FDSAEAKMKD ATEMWEKLEE QRMDDLKNPN SNKKEEVSKR RKKQGGDGNE EVSETITAEE AAEQATAMRS QIHLFWGNML FERSQVECKI
701: GKDGWNKNLD SAVERFKLAG ASEADIATVV KNHCSNEAAA TEGDEKKVPA P

Arabidopsis Description

Phox2Protein CLMP1 [Source:UniProtKB/Swiss-Prot;Acc:O48802]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.