Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 4
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s0787g00010.t01 | Wine grape | cytosol | 15.85 | 83.8 |
| VIT_00s1384g00010.t01 | Wine grape | cytosol | 6.66 | 83.33 |
| CDY69227 | Canola | cytosol | 43.41 | 67.78 |
| CDY30038 | Canola | cytosol, plastid | 71.37 | 64.89 |
| KRH02008 | Soybean | nucleus | 66.84 | 64.69 |
| Solyc02g081200.1.1 | Tomato | nucleus | 65.11 | 62.85 |
| PGSC0003DMT400043113 | Potato | cytosol | 64.85 | 62.6 |
| Bra019727.1-P | Field mustard | cytosol | 70.71 | 62.4 |
| KRH51148 | Soybean | cytosol | 63.52 | 62.03 |
| Solyc02g036360.1.1 | Tomato | nucleus | 62.32 | 61.5 |
| PGSC0003DMT400055266 | Potato | cytosol | 62.85 | 61.14 |
| VIT_02s0012g02600.t01 | Wine grape | cytosol | 12.52 | 60.26 |
| GSMUA_Achr1P18260_001 | Banana | nucleus | 52.6 | 55.95 |
| VIT_17s0000g03920.t01 | Wine grape | cytosol | 14.78 | 55.5 |
| VIT_00s1008g00010.t01 | Wine grape | cytosol | 17.04 | 54.7 |
| TraesCS5A01G164700.1 | Wheat | nucleus, plastid | 53.53 | 51.34 |
| TraesCS5B01G163300.1 | Wheat | nucleus, plastid | 53.66 | 51.34 |
| TraesCS5D01G170500.1 | Wheat | nucleus | 53.0 | 51.03 |
| Zm00001d039966_P001 | Maize | plastid | 52.73 | 50.7 |
| EES00364 | Sorghum | plastid | 52.6 | 50.64 |
| Os09t0135400-01 | Rice | nucleus | 51.93 | 49.62 |
| HORVU5Hr1G051200.1 | Barley | mitochondrion | 53.26 | 49.38 |
| AT2G25290.4 | Thale cress | cytosol | 34.62 | 34.9 |
| AT4G32070.1 | Thale cress | nucleus | 33.42 | 32.1 |
| AT5G20360.1 | Thale cress | cytosol | 29.03 | 26.95 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:20.2.4.5 | Gene3D:3.10.20.90 | EntrezGene:842537 | UniProt:A0A178WN90 | ProteinID:AAF70848.1 |
| ProteinID:AEE33961.1 | ArrayExpress:AT1G62390 | EnsemblPlantsGene:AT1G62390 | RefSeq:AT1G62390 | TAIR:AT1G62390 | RefSeq:AT1G62390-TAIR-G |
| EnsemblPlants:AT1G62390.1 | TAIR:AT1G62390.1 | EMBL:AY080782 | EMBL:AY093038 | EMBL:AY113996 | Unigene:At.24489 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | InterPro:IPR000270 | InterPro:IPR011990 | InterPro:IPR013026 |
| InterPro:IPR019734 | RefSeq:NP_564794.1 | UniProt:O48802 | ProteinID:OAP19708.1 | InterPro:PB1_dom | PFAM:PF00564 |
| PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PFscan:PS50293 | PFscan:PS51745 | PANTHER:PTHR22904 |
| PANTHER:PTHR22904:SF437 | Symbol:Phox2 | SMART:SM00028 | SMART:SM00666 | SUPFAM:SSF48452 | SUPFAM:SSF54277 |
| InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | UniParc:UPI00000A3327 | SEG:seg | : |
Description
Phox2Protein CLMP1 [Source:UniProtKB/Swiss-Prot;Acc:O48802]
Coordinates
chr1:-:23084293..23087141
Molecular Weight (calculated)
82712.5 Da
IEP (calculated)
5.319
GRAVY (calculated)
-0.572
Length
751 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKSGGRKKK SGGSNSNSSQ VNSSETSGLS KPSTIVNGGV DFDASIFLKR AHELKEEGNK KFQARDYVGA LEQYENGIKL IPKSHPDRAV FHSNRAACLM
101: QMKPIDYESV ISECSMALKS QPGFTRALLR RARAFEAVGK FDLAVQDVNV LLGSDPNHKD AGEISKRLKT ALGPHQDLQS RPSPAALGAS AALGGPIAGL
201: GPCLPSRNVH KKGVTSPVGS VSLPNASNGK VERPQVVNPV TENGGSVSKG QASRVVLKPV SHSPKGSKVE ELGSSSVAVV GKVQEKRIRW RPLKFVYDHD
301: IRLGQMPVNC RFKELREIVS SRFPSSKAVL IKYKDNDGDL VTITSTAELK LAESAADCIL TKEPDTDKSD SVGMLRLHVV DVSPEQEPML LEEEEEEVEE
401: KPVIEEVISS PTESLSETEI NTEKTDKEVE KEKASSSEDP ETKELEMDDW LFDFAHLFRT HVGIDPDAHI DLHELGMELC SEALEETVTS EKAQPLFDKA
501: SAKFQEVAAL AFFNWGNVHM CAARKRIPLD ESAGKEVVAA QLQTAYEWVK ERYTLAKEKY EQALSIKPDF YEGLLALGQQ QFEMAKLHWS YLLAQKIDIS
601: GWDPSETLNL FDSAEAKMKD ATEMWEKLEE QRMDDLKNPN SNKKEEVSKR RKKQGGDGNE EVSETITAEE AAEQATAMRS QIHLFWGNML FERSQVECKI
701: GKDGWNKNLD SAVERFKLAG ASEADIATVV KNHCSNEAAA TEGDEKKVPA P
101: QMKPIDYESV ISECSMALKS QPGFTRALLR RARAFEAVGK FDLAVQDVNV LLGSDPNHKD AGEISKRLKT ALGPHQDLQS RPSPAALGAS AALGGPIAGL
201: GPCLPSRNVH KKGVTSPVGS VSLPNASNGK VERPQVVNPV TENGGSVSKG QASRVVLKPV SHSPKGSKVE ELGSSSVAVV GKVQEKRIRW RPLKFVYDHD
301: IRLGQMPVNC RFKELREIVS SRFPSSKAVL IKYKDNDGDL VTITSTAELK LAESAADCIL TKEPDTDKSD SVGMLRLHVV DVSPEQEPML LEEEEEEVEE
401: KPVIEEVISS PTESLSETEI NTEKTDKEVE KEKASSSEDP ETKELEMDDW LFDFAHLFRT HVGIDPDAHI DLHELGMELC SEALEETVTS EKAQPLFDKA
501: SAKFQEVAAL AFFNWGNVHM CAARKRIPLD ESAGKEVVAA QLQTAYEWVK ERYTLAKEKY EQALSIKPDF YEGLLALGQQ QFEMAKLHWS YLLAQKIDIS
601: GWDPSETLNL FDSAEAKMKD ATEMWEKLEE QRMDDLKNPN SNKKEEVSKR RKKQGGDGNE EVSETITAEE AAEQATAMRS QIHLFWGNML FERSQVECKI
701: GKDGWNKNLD SAVERFKLAG ASEADIATVV KNHCSNEAAA TEGDEKKVPA P
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.