Factsheet for Os09t0135400-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
mitochondrion 2
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0787g00010.t01	Wine grape	cytosol	13.87	76.76
TraesCS5A01G164700.1	Wheat	nucleus, plastid	74.43	74.71
TraesCS5B01G163300.1	Wheat	nucleus, plastid	74.55	74.65
TraesCS5D01G170500.1	Wheat	nucleus	73.28	73.85
VIT_00s1384g00010.t01	Wine grape	cytosol	5.6	73.33
Zm00001d039966_P001	Maize	plastid	72.65	73.11
HORVU5Hr1G051200.1	Barley	mitochondrion	73.28	71.11
EES00364	Sorghum	plastid	69.34	69.87
GSMUA_Achr1P18260_001	Banana	nucleus	54.2	60.34
VIT_02s0012g02600.t01	Wine grape	cytosol	11.45	57.69
KRH51148	Soybean	cytosol	52.29	53.45
KRH02008	Soybean	nucleus	52.67	53.35
VIT_00s1008g00010.t01	Wine grape	cytosol	15.52	52.14
AT1G62390.1	Thale cress	plastid	49.62	51.93
CDY69227	Canola	cytosol	31.68	51.77
Solyc02g036360.1.1	Tomato	nucleus	49.87	51.51
PGSC0003DMT400043113	Potato	cytosol	50.76	51.29
Solyc02g081200.1.1	Tomato	nucleus	50.76	51.29
PGSC0003DMT400055266	Potato	cytosol	49.87	50.78
CDY30038	Canola	cytosol, plastid	51.15	48.67
VIT_17s0000g03920.t01	Wine grape	cytosol	12.21	48.0
Bra019727.1-P	Field mustard	cytosol	50.51	46.65
Os09t0556200-00	Rice	cytosol, plasma membrane	32.82	37.61
Os08t0296900-01	Rice	cytosol	32.44	32.95

Protein Annotations

Gene3D:1.25.40.10	MapMan:20.2.4.5	Gene3D:3.10.20.90	UniProt:A0A0P0XJ24	ProteinID:BAT06971.1	ncoils:Coil
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	InterPro:IPR000270	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734
EnsemblPlantsGene:Os09g0135400	EnsemblPlants:Os09t0135400-01	InterPro:PB1_dom	PFAM:PF00564	PFscan:PS50293	PFscan:PS51745
PANTHER:PTHR22904	PANTHER:PTHR22904:SF437	SMART:SM00028	SMART:SM00666	SUPFAM:SSF48452	SUPFAM:SSF54277
InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI000393B330	SEG:seg	:

Description

Similar to octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein. (Os09t0135400-01)

Coordinates

chr9:+:2685796..2688286

Molecular Weight (calculated)

85820.7 Da

IEP (calculated)

5.989

GRAVY (calculated)

-0.428

Length

786 amino acids

Sequence
(BLAST)

001: GKSGAKKKKP AAAASASAAA TKSSPAATEP KAPTQSQPPA ANGAAPHLVD PAVLLRRAHE LKEEGNRLFQ SRDYGGALRQ YELALRLAPR GHPDRAVFHS
101: NRAACLLQLR PVDHKAVAEE CSLALQAEPL FPRALLRRAR ALEALGRHEL ALTDALALLA LDPDHQDAVD LVHRLRSRIL SPSSSASGSA TSTPEPTSRP
201: SPAALGASAV VAGLGPSLPA RPFPKKPSPP PPPAQQQQSV PPMSKFNPSP PSPKLVPFSN SPPSSANASA AESSQKVTPT PLVPSSLSLK DKALMDKKVV
301: TRSRPLKLVY DHDIRLAQMP EKCSFRTLRE VVASRFPSSK AVLIKYKDAD GDLVTITCSA ELRLAESCVD IAGSEVIEDG ARHGQKLPML RLHIVEVSPD
401: QEPPMPTEEE KLEQDNELLV KGEDNSPHAS AAVVTDAEVT KQDVENVVAE AEQNTLTGKK DCGHAECKEA EIDDWLLQFA DLFRNQVGVD ADAHLDLHEL
501: GMELCSEALE ETVTSEEAQA LFEMAAAKFQ EVAALALFNW GNVHMCAARK RIPLDESAPK KVMSAQLCTA YDWVRDRYAL AGSKYEEALK IKPDFYEGLL
601: ALGQQHFETA KLHWSFALAD KVDLSAWDSS QTFKLFDSAE HKMRAATEMW EKVEEQRMAE LKEPSSEALK KRKKQHNADG QGELTPEEAA EQAAVMRQQI
701: HLFWGNMLFE RSQVEFKLDI ADWKKNLDAS IERFKLAGAS ESDISAVLKN HFSNTVSECE DKKIMTLDTG ISQISNNIED KCILES

Best Arabidopsis Sequence Match ( AT1G62390.1 )
(BLAST)

001: MGKSGGRKKK SGGSNSNSSQ VNSSETSGLS KPSTIVNGGV DFDASIFLKR AHELKEEGNK KFQARDYVGA LEQYENGIKL IPKSHPDRAV FHSNRAACLM
101: QMKPIDYESV ISECSMALKS QPGFTRALLR RARAFEAVGK FDLAVQDVNV LLGSDPNHKD AGEISKRLKT ALGPHQDLQS RPSPAALGAS AALGGPIAGL
201: GPCLPSRNVH KKGVTSPVGS VSLPNASNGK VERPQVVNPV TENGGSVSKG QASRVVLKPV SHSPKGSKVE ELGSSSVAVV GKVQEKRIRW RPLKFVYDHD
301: IRLGQMPVNC RFKELREIVS SRFPSSKAVL IKYKDNDGDL VTITSTAELK LAESAADCIL TKEPDTDKSD SVGMLRLHVV DVSPEQEPML LEEEEEEVEE
401: KPVIEEVISS PTESLSETEI NTEKTDKEVE KEKASSSEDP ETKELEMDDW LFDFAHLFRT HVGIDPDAHI DLHELGMELC SEALEETVTS EKAQPLFDKA
501: SAKFQEVAAL AFFNWGNVHM CAARKRIPLD ESAGKEVVAA QLQTAYEWVK ERYTLAKEKY EQALSIKPDF YEGLLALGQQ QFEMAKLHWS YLLAQKIDIS
601: GWDPSETLNL FDSAEAKMKD ATEMWEKLEE QRMDDLKNPN SNKKEEVSKR RKKQGGDGNE EVSETITAEE AAEQATAMRS QIHLFWGNML FERSQVECKI
701: GKDGWNKNLD SAVERFKLAG ASEADIATVV KNHCSNEAAA TEGDEKKVPA P

Arabidopsis Description

Phox2Protein CLMP1 [Source:UniProtKB/Swiss-Prot;Acc:O48802]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.