Factsheet for HORVU5Hr1G051200.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G164700.1	Wheat	nucleus, plastid	91.73	94.89
TraesCS5D01G170500.1	Wheat	nucleus	90.62	94.1
TraesCS5B01G163300.1	Wheat	nucleus, plastid	90.86	93.76
VIT_00s0787g00010.t01	Wine grape	cytosol	12.96	73.94
Zm00001d039966_P001	Maize	plastid	71.23	73.88
VIT_00s1384g00010.t01	Wine grape	cytosol	5.43	73.33
Os09t0135400-01	Rice	nucleus	71.11	73.28
EES00364	Sorghum	plastid	67.53	70.13
GSMUA_Achr1P18260_001	Banana	nucleus	53.83	61.76
VIT_02s0012g02600.t01	Wine grape	cytosol	10.86	56.41
KRH02008	Soybean	nucleus	52.59	54.9
AT1G62390.1	Thale cress	plastid	49.38	53.26
PGSC0003DMT400043113	Potato	cytosol	50.99	53.08
Solyc02g081200.1.1	Tomato	nucleus	50.99	53.08
CDY69227	Canola	cytosol	31.48	53.01
KRH51148	Soybean	cytosol	50.25	52.93
Solyc02g036360.1.1	Tomato	nucleus	49.63	52.83
PGSC0003DMT400055266	Potato	cytosol	49.63	52.07
VIT_00s1008g00010.t01	Wine grape	cytosol	14.94	51.71
CDY30038	Canola	cytosol, plastid	50.62	49.64
VIT_17s0000g03920.t01	Wine grape	cytosol	12.22	49.5
Bra019727.1-P	Field mustard	cytosol	50.86	48.41
HORVU5Hr1G088290.2	Barley	cytosol	31.85	37.02
HORVU5Hr1G050890.1	Barley	cytosol	29.26	25.27
HORVU5Hr1G050130.1	Barley	cytosol	9.88	20.15

Protein Annotations

Gene3D:1.25.40.10	MapMan:20.2.4.5	Gene3D:3.10.20.90	UniProt:A0A287R6N8	ncoils:Coil	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	EnsemblPlantsGene:HORVU5Hr1G051200	EnsemblPlants:HORVU5Hr1G051200.1	InterPro:IPR000270	InterPro:IPR011990	InterPro:IPR013026
InterPro:IPR019734	InterPro:PB1_dom	PFAM:PF00564	PFscan:PS50005	PFscan:PS50293	PFscan:PS51745
PANTHER:PTHR22904	PANTHER:PTHR22904:SF437	SMART:SM00028	SMART:SM00666	SUPFAM:SSF48452	SUPFAM:SSF54277
InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI000B462D7F	SEG:seg	:

Description

No Description!

Coordinates

chrchr5H:+:399591737..399594612

Molecular Weight (calculated)

88842.2 Da

IEP (calculated)

6.459

GRAVY (calculated)

-0.456

Length

810 amino acids

Sequence
(BLAST)

001: SRPLRLVRVH FLHRCSSFHS RFPPPPPRLI PMGKSGAKKK KASPSAAAAA AAAAKSPPAA AEHKAPPPAP PVANGAAQHQ APADPGVLLR RAHELKEEGN
101: RLFQSRDYAG ALRQYELALR LAPRGHPDRA VFHSNRAACL LQLRPVDHKA VAEECSLALQ AEPRFPRALL RRARALEALG RHELALADTL ALLALDPNHR
201: DAIDLSHRLR SRISSSSSSA SAGSTHEPTS RPSPAALGAS AVVAGLGPSL PSRPFPKKQS PPSPPPPQQQ PAPAMTKFNS SPAPKLVPFS NSPSSSAKAS
301: TADISHKTVP ALSVPSTQPV TETSLINRKV VTRWRPLKLV YGHDIRLGQM PEKCSFHELR EVVAKRFPSS KAVLMKYKDA DGDLVTITCT SELRLAEACG
401: VGMDVKEGDN NLPVLRLHIV EVNPEQEPLP TEEQKLEEEE LLITGEDSSS HTSAEVANVE VAKPDLENGV AEQSILSRKK DCGHAECKEA EIDDWLLQFA
501: ELFRNQVGID ADAHLDLHEL GMELCSEAIE ETVTSEEAQS LFEMAAAKFQ EVAALALFNW GNVHMCAARK RIPLDESSPK EIMSAQLRTA YDWVLEMYAL
601: AGHRYEEALN IKQDFYEGLL ALGQQHFETA KLHWSFALAD KVDLSTWDSS ETLKLFDSAE EKMRAATEMW EKVEEQRMLE LKTPGATEKD EVLKKRKKQH
701: SADGQGELTP EEAAEQAAVM RQQIHLFWGN MLFERSQVEF KLVVGDWKKN LDASVERFKL AGASESDIST VLKNHFSNAV SESEEKKVMP SGTGSSQTSD
801: NIDDESVVES

Best Arabidopsis Sequence Match ( AT1G62390.1 )
(BLAST)

001: MGKSGGRKKK SGGSNSNSSQ VNSSETSGLS KPSTIVNGGV DFDASIFLKR AHELKEEGNK KFQARDYVGA LEQYENGIKL IPKSHPDRAV FHSNRAACLM
101: QMKPIDYESV ISECSMALKS QPGFTRALLR RARAFEAVGK FDLAVQDVNV LLGSDPNHKD AGEISKRLKT ALGPHQDLQS RPSPAALGAS AALGGPIAGL
201: GPCLPSRNVH KKGVTSPVGS VSLPNASNGK VERPQVVNPV TENGGSVSKG QASRVVLKPV SHSPKGSKVE ELGSSSVAVV GKVQEKRIRW RPLKFVYDHD
301: IRLGQMPVNC RFKELREIVS SRFPSSKAVL IKYKDNDGDL VTITSTAELK LAESAADCIL TKEPDTDKSD SVGMLRLHVV DVSPEQEPML LEEEEEEVEE
401: KPVIEEVISS PTESLSETEI NTEKTDKEVE KEKASSSEDP ETKELEMDDW LFDFAHLFRT HVGIDPDAHI DLHELGMELC SEALEETVTS EKAQPLFDKA
501: SAKFQEVAAL AFFNWGNVHM CAARKRIPLD ESAGKEVVAA QLQTAYEWVK ERYTLAKEKY EQALSIKPDF YEGLLALGQQ QFEMAKLHWS YLLAQKIDIS
601: GWDPSETLNL FDSAEAKMKD ATEMWEKLEE QRMDDLKNPN SNKKEEVSKR RKKQGGDGNE EVSETITAEE AAEQATAMRS QIHLFWGNML FERSQVECKI
701: GKDGWNKNLD SAVERFKLAG ASEADIATVV KNHCSNEAAA TEGDEKKVPA P

Arabidopsis Description

Phox2Protein CLMP1 [Source:UniProtKB/Swiss-Prot;Acc:O48802]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.