Factsheet for HORVU5Hr1G050890.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G019530.1
HORVU5Hr1G032550.3

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G32070.1	HORVU4Hr1G019530.1	AT4G09570.1	19130088
AT4G32070.1	HORVU5Hr1G032550.3	AT4G09570.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G168200.1	Wheat	cytosol	79.32	79.57
TraesCS5A01G163200.1	Wheat	cytosol	77.72	77.97
TraesCS5B01G160600.1	Wheat	cytosol	77.61	77.86
KRG84467	Soybean	cytosol	8.1	58.46
KRH05201	Soybean	cytosol	17.91	55.81
GSMUA_Achr7P05370_001	Banana	cytosol	37.1	53.37
GSMUA_Achr4P20360_001	Banana	cytosol	37.85	52.99
EER96429	Sorghum	plastid	50.32	50.81
GSMUA_Achr3P00890_001	Banana	cytosol	36.25	50.6
Zm00001d019666_P001	Maize	plastid	49.36	49.95
HORVU5Hr1G088290.2	Barley	cytosol	36.46	49.07
GSMUA_Achr4P04120_001	Banana	cytosol	26.65	48.83
VIT_11s0118g00490.t01	Wine grape	cytosol	34.75	48.08
GSMUA_Achr9P22500_001	Banana	cytosol	35.07	47.75
PGSC0003DMT400038437	Potato	cytosol	32.94	46.26
PGSC0003DMT400049152	Potato	cytosol	32.94	46.26
Solyc08g029190.2.1	Tomato	nucleus	32.94	46.19
Solyc06g065910.2.1	Tomato	cytosol	33.05	45.26
PGSC0003DMT400067142	Potato	cytosol	32.62	44.67
CDX68815	Canola	cytosol, nucleus, plastid	32.52	44.66
CDY38510	Canola	nucleus	32.84	44.25
CDY58928	Canola	cytosol	32.94	44.21
CDY11535	Canola	nucleus	32.94	43.77
VIT_04s0008g06310.t01	Wine grape	mitochondrion	34.65	43.28
KRH37816	Soybean	cytosol	33.48	43.01
CDX75218	Canola	cytosol	33.05	42.76
CDX83226	Canola	cytosol	32.73	42.64
Bra011320.1-P	Field mustard	cytosol, nucleus, plastid	32.73	42.52
CDY13473	Canola	nucleus	32.73	42.46
CDX72344	Canola	nucleus	31.77	42.45
KRH20222	Soybean	nucleus	32.73	42.4
KRH61724	Soybean	cytosol	32.73	42.29
KRH03587	Soybean	nucleus	32.41	41.93
Bra000549.1-P	Field mustard	nucleus	34.12	41.83
Bra023964.1-P	Field mustard	nucleus	32.41	41.82
AT2G25290.4	Thale cress	cytosol	33.05	41.61
Solyc07g007390.2.1	Tomato	nucleus	34.22	41.26
Bra007805.1-P	Field mustard	nucleus	33.16	41.19
PGSC0003DMT400078952	Potato	cytosol	34.33	39.7
AT4G32070.1	Thale cress	nucleus	33.05	39.64
CDX70924	Canola	cytosol	24.73	36.42
CDY51850	Canola	cytosol	24.2	35.69
Bra006557.1-P	Field mustard	cytosol	24.63	34.74
HORVU5Hr1G050130.1	Barley	cytosol	14.18	33.5
KRH52396	Soybean	cytosol	3.62	33.01
KRH05202	Soybean	cytosol	12.15	32.76
AT5G20360.1	Thale cress	cytosol	25.27	29.3
HORVU5Hr1G051200.1	Barley	mitochondrion	25.27	29.26

Protein Annotations

Gene3D:1.25.40.10	MapMan:20.2.4.5	UniProt:A0A287R6L1	ncoils:Coil	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	EnsemblPlantsGene:HORVU5Hr1G050890	EnsemblPlants:HORVU5Hr1G050890.1	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734
PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR22904	PANTHER:PTHR22904:SF419	SMART:SM00028	SUPFAM:SSF48452
SUPFAM:SSF54277	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI000B477160	SEG:seg

Description

No Description!

Coordinates

chrchr5H:+:397051000..397058369

Molecular Weight (calculated)

106372.0 Da

IEP (calculated)

4.801

GRAVY (calculated)

-0.791

Length

938 amino acids

Sequence
(BLAST)

001: MEEVPSEKKQ TESESINCAT SSSSNQDIPN SLVNKDEDPA VGVVTELKKE GTSVGQKEES ASTAIDLKEE GTATQLKEEG AATQLKEEGA SKEDGAAIDS
101: KEEGAKTELE EKLMLSQRKD YEKAIELKGE GTRLFQRRDY EGAALEFDKA IKLLPKEHND IAFLHCNIAA CYMHMNPESY ERAVDECNAA LEASPKYTNA
201: LLKRARCFEA LDRLDLACED VQKVLSLEPN NVSALELYES IREEMETEKL LENQVVSPVE PKAGFSKEKI QRKISRKFRN NSIVEEVWLI HDDDAQEDDE
301: DDTDEECSEE NHVENDLSNE GNDTRDMPSR HNHDEDKRNT EQNHVKHGQY KLGASDEGQQ LQHASRDMEQ IHCKETESQN KHENPLKEIK VRSGQHQQNQ
401: VGDMDMRQKQ IEDVPTTSRS KQEINTEMYE RFINGGQARR SLQRHTSRGG EKQEKQTPIK LASHGGDEHQ KQKRTYATNG DTKTVKFVMG DDIRIALVPE
501: ECSLLQAISV ARCKYSPHLK AMLLKFQDIE GDLVTITSTE ELRWVEDLKQ GPARLYIKEV SPEREITKDI VMPNISTVML ERKHSVSECE SSRHAAEDKS
601: SSYADDWMVQ FARLFKNHVG FDSDALVDLG DLGTRLCIEA MEDTITSEEA QEIFHAAEAK FQEVAALAFF NWGNIHMSRA KKRLSLSEDA SKESVLSQVK
701: TAFELACAEY AKAGKKFEDT VDVKPDFYEG LIALGNQQFE QAKLSWRYAD ACKVDMGTEV LELFNRAEDN MEKGMEMWEG IEYLRLKGLS KSKKEKILLD
801: KLGMDGHQKD LTADDAFEQA SNMRSQLNIS WATILYERSV VEFKLGLASW EESLTEAIEK FKTGGASLAD ISVMIKNHCA NEKTQEGLSF KIDEIVQAWN
901: EMYDAKKLKN GSSSFRLEPL FRRQPSKLHN VLEHIKHT

Best Arabidopsis Sequence Match ( AT2G25290.2 )
(BLAST)

001: MGKPTGKKKN NNYTEMPPTE SSTTGGGKTG KSFDRSATKS FDDDMTIFIN RALELKEEGN KLFQKRDYEG AMFRYDKAVK LLPRDHGDVA YLRTSMASCY
101: MQMGLGEYPN AINECNLALE ASPRFSKALL KRARCYEALN KLDFAFRDSR VVLNMEPENV SANEIFERVK KVLVGKGIDV DEMEKNLVNV QPVGAARLRK
201: IVKERLRKKK KKSMTMTNGG NDGERKSVEA VVEDAKVDNG EEVDSGRKGK AIEEKKLEDK VAVMDKEVIA SEIKEDATVT RTVKLVHGDD IRWAQLPLDS
301: SVVLVRDVIK DRFPALKGFL IKYRDSEGDL VTITTTDELR LAASTREKLG SFRLYIAEVS PNQEPTYDVI DNDESTDKFA KGSSSVADNG SVGDFVESEK
401: ASTSLEHWIF QFAQLFKNHV GFDSDSYLEL HNLGMKLYTE AMEDIVTGED AQELFDIAAD KFQEMAALAM FNWGNVHMSK ARRQIYFPED GSRETILEKV
501: EAGFEWAKNE YNKAAEKYEG AVKIKSDFYE ALLALGQQQF EQAKLCWYHA LSGEVDIESD ASQDVLKLYN KAEESMEKGM QIWEEMEERR LNGISNFDKH
601: KELLQKLGLD GIFSEASDEE SAEQTANMSS QINLLWGSLL YERSIVEYKL GLPTWDECLE VAVEKFELAG ASATDIAVMV KNHCSSDNAL EGMGFKIDEI
701: VQAWNEMYDA KRWQIGVPSF RLEPLFRRRS PKLHDILENV FSGPQ

Arabidopsis Description

Phox1Phox1 [Source:UniProtKB/TrEMBL;Acc:A0A178VW51]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.