Factsheet for Bra023964.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13473	Canola	nucleus	89.55	90.04
Bra011320.1-P	Field mustard	cytosol, nucleus, plastid	74.55	75.07
KRG84467	Soybean	cytosol	12.93	72.31
AT4G32070.1	Thale cress	nucleus	72.49	67.39
Bra007805.1-P	Field mustard	nucleus	66.3	63.84
Bra000549.1-P	Field mustard	nucleus	65.06	61.83
KRH05201	Soybean	cytosol	25.45	61.46
Solyc08g029190.2.1	Tomato	nucleus	52.27	56.8
PGSC0003DMT400049152	Potato	cytosol	51.31	55.84
PGSC0003DMT400038437	Potato	cytosol	51.31	55.84
Solyc06g065910.2.1	Tomato	cytosol	51.17	54.31
PGSC0003DMT400067142	Potato	cytosol	51.03	54.16
VIT_04s0008g06310.t01	Wine grape	mitochondrion	55.85	54.06
KRH61724	Soybean	cytosol	53.23	53.31
GSMUA_Achr4P20360_001	Banana	cytosol	46.49	50.45
GSMUA_Achr3P00890_001	Banana	cytosol	46.35	50.15
GSMUA_Achr7P05370_001	Banana	cytosol	44.84	50.0
Os09t0556200-00	Rice	cytosol, plasma membrane	47.04	49.85
GSMUA_Achr4P04120_001	Banana	cytosol	34.53	49.02
Zm00001d021400_P001	Maize	cytosol	45.94	48.62
KRH52396	Soybean	cytosol	6.88	48.54
EER97166	Sorghum	cytosol	45.94	48.27
TraesCS5D01G366100.1	Wheat	cytosol	45.67	47.77
TraesCS5A01G357000.1	Wheat	cytosol	45.53	47.63
HORVU5Hr1G088290.2	Barley	cytosol	45.25	47.2
TraesCS5B01G359500.1	Wheat	cytosol	45.25	47.2
GSMUA_Achr9P22500_001	Banana	cytosol	42.09	44.41
KRH05202	Soybean	cytosol	20.91	43.68
Os08t0296900-01	Rice	cytosol	46.08	43.28
EES13437	Sorghum	cytosol	43.33	42.4
Zm00001d024424_P001	Maize	cytosol	42.37	41.57
Zm00001d037923_P001	Maize	cytosol	8.67	38.89
Bra006557.1-P	Field mustard	cytosol	33.01	36.09
EER96429	Sorghum	plastid	43.33	33.91
Zm00001d019666_P001	Maize	plastid	42.5	33.33
HORVU5Hr1G050890.1	Barley	cytosol	41.82	32.41
TraesCS5D01G168200.1	Wheat	cytosol	41.68	32.41
TraesCS5B01G160600.1	Wheat	cytosol	41.54	32.3
TraesCS5A01G163200.1	Wheat	cytosol	41.4	32.19
Bra019727.1-P	Field mustard	cytosol	33.98	29.02
TraesCS5D01G165100.1	Wheat	cytosol	14.31	27.01
HORVU5Hr1G050130.1	Barley	cytosol	14.03	25.69
TraesCS5A01G160000.1	Wheat	cytosol	12.52	22.98
TraesCS5B01G157700.1	Wheat	cytosol	13.07	22.41

Protein Annotations

Gene3D:1.25.40.10	MapMan:20.2.4.5	Gene3D:3.10.20.90	EnsemblPlantsGene:Bra023964	EnsemblPlants:Bra023964.1	EnsemblPlants:Bra023964.1-P
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000270	InterPro:IPR011990	InterPro:IPR013026
InterPro:IPR019734	UniProt:M4E5B0	InterPro:PB1_dom	PFAM:PF00564	PFscan:PS50293	PFscan:PS51745
PANTHER:PTHR22904	PANTHER:PTHR22904:SF419	SMART:SM00028	SMART:SM00666	SUPFAM:SSF48452	SUPFAM:SSF54277
InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI0002540FE6	SEG:seg	:

Description

AT2G25290 (E=4e-265) | binding

Coordinates

chrA03:-:28558740..28560923

Molecular Weight (calculated)

82620.5 Da

IEP (calculated)

6.108

GRAVY (calculated)

-0.629

Length

727 amino acids

Sequence
(BLAST)

001: MGKPAAKKKT PEMPKDASGG GGKSGKANHR STSRAFDEDM EIFINRALEL KEEGNKLFQK RDNEGAMLTY HKAVKLLPKE HIDIAYLRTS MASCYMRMGL
101: GEYPHAINEC NLALEASPRY SKALVRRSRC YEALNKLDYA FRDVMIVLNM EPENASSNEV FERVKKALVE KGIDVDEMEK SFVKKVVKKS KKKKSGVESP
201: KIVKRDEAES KDKPKEEKSD KKSEIDAKMS GNKEENKPKF KKQKKRSCRK AGGEERKMED DKVVVMDKEV IASTKEEATV TRTVKLVHGD DIRWAQLPLD
301: SSVRLVRDVI KDRFPSLKGF LIKYKDPEGD LVTITATNEL NLAASNNDKL GSLRLYIAEV HPDQEPSYDG MKVVKRSSVG EYVESDKAST SFENWIFQFA
401: QMFKNHVGFD SDSYLDLHDL GMKLYTEAME DAVTGEDAQE LFGIAADKFQ EMGALAMFNW GNVHMSKARK QVSFPEDASR EAVIEAVEAA FVWTQNEYNK
501: AAEKYEEALK IKPDFHEALI ALGQQQFEQA KLLWYHAQKT KVDAESEVSQ DVLKLYNKAE DSMEKGMQIR EEMEEGRLNG ISKYDIEKSL LLHKMELFSE
601: VSDEEKTANM SSQINLLWGS LLYERSIVEY KLGLLTWEEC LEVAVEKFEL AGASSTDVAV MVKNHCSSES ALEGMGFKID EIVQAWNEMY DAKRWQTGVP
701: SFRLEPMFRR RAPKLHDILE NVFSGSA

Best Arabidopsis Sequence Match ( AT4G32070.1 )
(BLAST)

001: MGKPTAKKKN PETPKDASGG GGGGGGKSGK TYHRSTSRVF DEDMEIFISR ALELKEEGNK LFQKRDHEGA MLSFDKALKL LPKDHIDVAY LRTSMASCYM
101: QMGLGEYPNA ISECNLALEA SPRYSKALVR RSRCYEALNK LDYAFRDARI VLNMEPGNVS ANEIFDRVKK VLVDKGIDVD EMEKDFVDVQ PVCAARLKKI
201: VKERLRKSKK KKKSGGKDEE LKSPKVVVVD KGDEAEGRNK PKEEKSDKSD IDGKIGGKRE EKKTSFKSDK GQKKKSGGNK AGEERKVEDK VVVMDKEVIA
301: SEIVDGGGSK KEGATVTRTI KLVHGDDIRW AQLPLDSTVR LVRDVIRDRF PALRGFLIKY RDTEGDLVTI TTTDELRLAA STHDKLGSLR LYIAEVNPDQ
401: EPTYDGMSNT ESTDKVSKRL SSLADNGSVG EYVGSDKASG CFENWIFQFA QLFKNHVGFD SDSYVDLHDL GMKLYTEAME DAVTGEDAQE LFQIAADKFQ
501: EMGALALLNW GNVHMSKARK QVCIPEDASR EAIIEAVEAA FVWTQNEYNK AAEKYEEAIK VKPDFYEALL ALGQEQFEHA KLCWYHALKS KVDLESEASQ
601: EVLKLYNKAE DSMERGMQIW EEMEECRLNG ISKLDKHKNM LRKLELDELF SEASEEETVE QTANMSSQIN LLWGSLLYER SIVEYKLGLP TWDECLEVAV
701: EKFELAGASA TDIAVMVKNH CSSESALEGM GFKIDEIVQA WNEMYDAKRW QMGVPSFRLE PMFRRRAPKL HDILENVFSG PV

Arabidopsis Description

Phox4Protein PHOX4 [Source:UniProtKB/Swiss-Prot;Acc:F4JTI1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.