Factsheet for AT4G32070.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX68815	Canola	cytosol, nucleus, plastid	67.77	77.6
Bra011320.1-P	Field mustard	cytosol, nucleus, plastid	70.72	76.59
CDX75218	Canola	cytosol	70.97	76.55
AT2G25290.4	Thale cress	cytosol	71.23	74.77
CDX72344	Canola	nucleus	67.01	74.64
CDY13473	Canola	nucleus	68.41	74.0
KRG84467	Soybean	cytosol	12.28	73.85
Bra023964.1-P	Field mustard	nucleus	67.39	72.49
KRH05201	Soybean	cytosol	24.17	62.79
Solyc08g029190.2.1	Tomato	nucleus	50.77	59.34
Solyc06g065910.2.1	Tomato	cytosol	51.02	58.25
PGSC0003DMT400067142	Potato	cytosol	50.9	58.1
PGSC0003DMT400038437	Potato	cytosol	49.49	57.93
PGSC0003DMT400049152	Potato	cytosol	49.49	57.93
VIT_04s0008g06310.t01	Wine grape	mitochondrion	54.48	56.72
KRH61724	Soybean	cytosol	50.51	54.41
GSMUA_Achr4P20360_001	Banana	cytosol	45.27	52.84
GSMUA_Achr3P00890_001	Banana	cytosol	45.14	52.53
GSMUA_Achr7P05370_001	Banana	cytosol	42.84	51.38
Os09t0556200-00	Rice	cytosol, plasma membrane	45.01	51.31
Zm00001d021400_P001	Maize	cytosol	43.73	49.78
EER97166	Sorghum	cytosol	43.99	49.71
GSMUA_Achr4P04120_001	Banana	cytosol	32.1	49.02
KRH52396	Soybean	cytosol	6.39	48.54
TraesCS5D01G366100.1	Wheat	cytosol	42.71	48.06
TraesCS5A01G357000.1	Wheat	cytosol	42.58	47.91
HORVU5Hr1G088290.2	Barley	cytosol	42.46	47.63
TraesCS5B01G359500.1	Wheat	cytosol	42.33	47.49
GSMUA_Achr9P22500_001	Banana	cytosol	41.18	46.73
Os08t0296900-01	Rice	cytosol	44.5	44.96
KRH05202	Soybean	cytosol	19.69	44.25
Zm00001d024424_P001	Maize	cytosol	40.79	43.05
EES13437	Sorghum	cytosol	40.54	42.66
Zm00001d037923_P001	Maize	cytosol	8.18	39.51
Zm00001d019666_P001	Maize	plastid	42.33	35.71
EER96429	Sorghum	plastid	41.82	35.2
TraesCS5D01G168200.1	Wheat	cytosol	40.41	33.8
TraesCS5A01G163200.1	Wheat	cytosol	40.15	33.58
TraesCS5B01G160600.1	Wheat	cytosol	40.15	33.58
AT5G20360.1	Thale cress	cytosol	34.65	33.5
AT1G62390.1	Thale cress	plastid	32.1	33.42
HORVU5Hr1G050890.1	Barley	cytosol	39.64	33.05
TraesCS5D01G165100.1	Wheat	cytosol	12.28	24.94
HORVU5Hr1G050130.1	Barley	cytosol	12.53	24.69
TraesCS5A01G160000.1	Wheat	cytosol	11.38	22.47
TraesCS5B01G157700.1	Wheat	cytosol	12.15	22.41

Protein Annotations

Gene3D:1.25.40.10	MapMan:20.2.4.5	Gene3D:3.10.20.90	EntrezGene:829338	UniProt:A0A178UWG6	ProteinID:AEE86001.2
EMBL:AK221517	ProteinID:ANM67744.1	ArrayExpress:AT4G32070	EnsemblPlantsGene:AT4G32070	RefSeq:AT4G32070	TAIR:AT4G32070
RefSeq:AT4G32070-TAIR-G	EnsemblPlants:AT4G32070.1	TAIR:AT4G32070.1	Unigene:At.49412	ProteinID:CAA16582.1	ProteinID:CAB79925.1
UniProt:F4JTI1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	InterPro:IPR000270	InterPro:IPR011990	InterPro:IPR013026
InterPro:IPR019734	RefSeq:NP_001320111.1	RefSeq:NP_001329553.1	ProteinID:OAO98228.1	InterPro:PB1_dom	PFAM:PF00564
PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078
PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098
PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019
PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029
PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052
PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281
PFscan:PS50005	PFscan:PS50293	PFscan:PS51745	PANTHER:PTHR22904	PANTHER:PTHR22904:SF419	Symbol:Phox4
SMART:SM00028	SMART:SM00666	SUPFAM:SSF48452	SUPFAM:SSF54277	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf
InterPro:TPR_repeat	UniParc:UPI0007E15D3E	SEG:seg	:	:	:

Description

Phox4Protein PHOX4 [Source:UniProtKB/Swiss-Prot;Acc:F4JTI1]

Coordinates

chr4:-:15503802..15507312

Molecular Weight (calculated)

87979.6 Da

IEP (calculated)

5.447

GRAVY (calculated)

-0.596

Length

782 amino acids

Sequence
(BLAST)

001: MGKPTAKKKN PETPKDASGG GGGGGGKSGK TYHRSTSRVF DEDMEIFISR ALELKEEGNK LFQKRDHEGA MLSFDKALKL LPKDHIDVAY LRTSMASCYM
101: QMGLGEYPNA ISECNLALEA SPRYSKALVR RSRCYEALNK LDYAFRDARI VLNMEPGNVS ANEIFDRVKK VLVDKGIDVD EMEKDFVDVQ PVCAARLKKI
201: VKERLRKSKK KKKSGGKDEE LKSPKVVVVD KGDEAEGRNK PKEEKSDKSD IDGKIGGKRE EKKTSFKSDK GQKKKSGGNK AGEERKVEDK VVVMDKEVIA
301: SEIVDGGGSK KEGATVTRTI KLVHGDDIRW AQLPLDSTVR LVRDVIRDRF PALRGFLIKY RDTEGDLVTI TTTDELRLAA STHDKLGSLR LYIAEVNPDQ
401: EPTYDGMSNT ESTDKVSKRL SSLADNGSVG EYVGSDKASG CFENWIFQFA QLFKNHVGFD SDSYVDLHDL GMKLYTEAME DAVTGEDAQE LFQIAADKFQ
501: EMGALALLNW GNVHMSKARK QVCIPEDASR EAIIEAVEAA FVWTQNEYNK AAEKYEEAIK VKPDFYEALL ALGQEQFEHA KLCWYHALKS KVDLESEASQ
601: EVLKLYNKAE DSMERGMQIW EEMEECRLNG ISKLDKHKNM LRKLELDELF SEASEEETVE QTANMSSQIN LLWGSLLYER SIVEYKLGLP TWDECLEVAV
701: EKFELAGASA TDIAVMVKNH CSSESALEGM GFKIDEIVQA WNEMYDAKRW QMGVPSFRLE PMFRRRAPKL HDILENVFSG PV

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.