Factsheet for HORVU5Hr1G088290.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G019530.1
HORVU5Hr1G032550.3

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G32070.1	HORVU4Hr1G019530.1	AT4G09570.1	19130088
AT4G32070.1	HORVU5Hr1G032550.3	AT4G09570.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G357000.1	Wheat	cytosol	96.99	97.27
TraesCS5B01G359500.1	Wheat	cytosol	95.55	95.55
TraesCS5D01G366100.1	Wheat	cytosol	95.27	95.54
Os09t0556200-00	Rice	cytosol, plasma membrane	83.21	84.55
EER97166	Sorghum	cytosol	80.92	81.5
Zm00001d021400_P001	Maize	cytosol	79.63	80.79
KRG84467	Soybean	cytosol	11.91	63.85
GSMUA_Achr4P20360_001	Banana	cytosol	59.97	62.39
GSMUA_Achr7P05370_001	Banana	cytosol	55.95	59.82
GSMUA_Achr4P04120_001	Banana	cytosol	43.9	59.77
GSMUA_Achr3P00890_001	Banana	cytosol	56.67	58.78
Zm00001d037923_P001	Maize	cytosol	13.63	58.64
KRH05201	Soybean	cytosol	24.53	56.81
VIT_11s0118g00490.t01	Wine grape	cytosol	52.94	54.42
GSMUA_Achr9P22500_001	Banana	cytosol	53.66	54.28
Solyc08g029190.2.1	Tomato	nucleus	50.65	52.77
PGSC0003DMT400038437	Potato	cytosol	50.36	52.54
PGSC0003DMT400049152	Potato	cytosol	50.36	52.54
Solyc06g065910.2.1	Tomato	cytosol	49.78	50.66
PGSC0003DMT400067142	Potato	cytosol	48.92	49.78
CDX68815	Canola	cytosol, nucleus, plastid	47.49	48.46
VIT_04s0008g06310.t01	Wine grape	mitochondrion	51.79	48.07
CDY58928	Canola	cytosol	47.92	47.78
KRH61724	Soybean	cytosol	49.64	47.66
CDY11535	Canola	nucleus	48.21	47.59
CDY38510	Canola	nucleus	47.49	47.56
KRH20222	Soybean	nucleus	49.21	47.38
Solyc07g007390.2.1	Tomato	nucleus	52.65	47.17
KRH37816	Soybean	cytosol	49.35	47.12
CDX75218	Canola	cytosol	48.92	47.03
Bra011320.1-P	Field mustard	cytosol, nucleus, plastid	48.21	46.54
CDX83226	Canola	cytosol	47.92	46.39
KRH03587	Soybean	nucleus	48.21	46.34
AT2G25290.4	Thale cress	cytosol	49.35	46.17
CDY13473	Canola	nucleus	47.2	45.5
Bra023964.1-P	Field mustard	nucleus	47.2	45.25
Bra007805.1-P	Field mustard	nucleus	48.92	45.17
CDX72344	Canola	nucleus	45.34	45.01
PGSC0003DMT400078952	Potato	cytosol	52.08	44.76
Bra000549.1-P	Field mustard	nucleus	48.92	44.58
KRH52396	Soybean	cytosol	6.31	42.72
AT4G32070.1	Thale cress	nucleus	47.63	42.46
KRH05202	Soybean	cytosol	19.94	39.94
CDY51850	Canola	cytosol	35.01	38.36
Bra006557.1-P	Field mustard	cytosol	35.15	36.84
CDX70924	Canola	cytosol	33.57	36.73
HORVU5Hr1G050890.1	Barley	cytosol	49.07	36.46
HORVU5Hr1G051200.1	Barley	mitochondrion	37.02	31.85
AT5G20360.1	Thale cress	cytosol	35.29	30.41
HORVU5Hr1G050130.1	Barley	cytosol	15.49	27.2

Protein Annotations

Gene3D:1.25.40.10	MapMan:20.2.4.5	Gene3D:3.10.20.90	EMBL:AK362783	ncoils:Coil	UniProt:F2DFW6
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:HORVU5Hr1G088290	EnsemblPlants:HORVU5Hr1G088290.2	InterPro:IPR000270
InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	InterPro:PB1_dom	PFAM:PF00564	PFscan:PS50005
PFscan:PS50293	PFscan:PS51745	PANTHER:PTHR22904	PANTHER:PTHR22904:SF429	SMART:SM00028	SMART:SM00666
SUPFAM:SSF48452	SUPFAM:SSF54277	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI00020067EF
SEG:seg	:	:	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DFW6]

Coordinates

chrchr5H:-:581313442..581318289

Molecular Weight (calculated)

78428.7 Da

IEP (calculated)

5.095

GRAVY (calculated)

-0.592

Length

697 amino acids

Sequence
(BLAST)

001: MGKPSLKKKR ASSGAGKGGG GDHHGGSKPG ALERSGSKVL DGDETIFAEM AQELREEGNK LFQRRDYERA LLNYEKAVRL LPASAALDAA YLHSNLAACY
101: MQMSPPDHYR AINECNLALD AAPKYSKALL KRARCFEALG RLDLAARDVD RVLAAEPGNL TALDVADRVR RTMEEKGFVV DGEAVMPTPE EVVAAAPKQQ
201: QKPRKKKGRK ASAKAAAAAV EEQGEEKAAE PVKEAEEPPR QVKLVFGEDI RWAQVPASCG MAQLREAVRG KFPGLKAVLV KYKDREGDLV TITNQDELKW
301: AEDLTEPGSS LRLYVTEANP EHEPYLEDAS SGPLDRNMHN ASDNGSIRSN RQDEDRSTVT YIDDWIVQFA RLFKNHVGVS SDEYLDLHEV SMKLYTDAIE
401: DTITTDEAQE VFQLAEGNFQ EMAALAFFHW GNVHMSRARK RLLLPEDSPK ELVLEKVKEA YEWAKEEYKK AGKTYEEAVR AKPDFFEGFL ALAHQQFEQA
501: KLSWYYAIGT NADLDTWPSS EVLELFNRAE DNMEKGTEMW EEVEEQRLKN RSRPSQENAV LEKMGMEEYI KDVSTDDAAE RASNMRSQIN ILWGMLLYER
601: SVVEFKLGLP AWEDCLMAAI EKFKLGGASA TNIAVLVKNH CANETAQDGL GFNVDEIVQA WNEMYDIKRW LRGAPSFRLE PLFRRRTPQL HMALEHI

Best Arabidopsis Sequence Match ( AT2G25290.2 )
(BLAST)

001: MGKPTGKKKN NNYTEMPPTE SSTTGGGKTG KSFDRSATKS FDDDMTIFIN RALELKEEGN KLFQKRDYEG AMFRYDKAVK LLPRDHGDVA YLRTSMASCY
101: MQMGLGEYPN AINECNLALE ASPRFSKALL KRARCYEALN KLDFAFRDSR VVLNMEPENV SANEIFERVK KVLVGKGIDV DEMEKNLVNV QPVGAARLRK
201: IVKERLRKKK KKSMTMTNGG NDGERKSVEA VVEDAKVDNG EEVDSGRKGK AIEEKKLEDK VAVMDKEVIA SEIKEDATVT RTVKLVHGDD IRWAQLPLDS
301: SVVLVRDVIK DRFPALKGFL IKYRDSEGDL VTITTTDELR LAASTREKLG SFRLYIAEVS PNQEPTYDVI DNDESTDKFA KGSSSVADNG SVGDFVESEK
401: ASTSLEHWIF QFAQLFKNHV GFDSDSYLEL HNLGMKLYTE AMEDIVTGED AQELFDIAAD KFQEMAALAM FNWGNVHMSK ARRQIYFPED GSRETILEKV
501: EAGFEWAKNE YNKAAEKYEG AVKIKSDFYE ALLALGQQQF EQAKLCWYHA LSGEVDIESD ASQDVLKLYN KAEESMEKGM QIWEEMEERR LNGISNFDKH
601: KELLQKLGLD GIFSEASDEE SAEQTANMSS QINLLWGSLL YERSIVEYKL GLPTWDECLE VAVEKFELAG ASATDIAVMV KNHCSSDNAL EGMGFKIDEI
701: VQAWNEMYDA KRWQIGVPSF RLEPLFRRRS PKLHDILENV FSGPQ

Arabidopsis Description

Phox1Phox1 [Source:UniProtKB/TrEMBL;Acc:A0A178VW51]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.