CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38510	Canola	nucleus	87.92	90.95
Bra000549.1-P	Field mustard	nucleus	90.69	85.36
CDY58928	Canola	cytosol	76.11	78.4
CDY11535	Canola	nucleus	75.97	77.48
AT2G25290.4	Thale cress	cytosol	77.08	74.5
KRG84467	Soybean	cytosol	13.19	73.08
CDX68815	Canola	cytosol, nucleus, plastid	65.0	68.52
CDX75218	Canola	cytosol	66.81	66.34
CDX72344	Canola	nucleus	63.89	65.53
CDY13473	Canola	nucleus	65.0	64.73
KRH05201	Soybean	cytosol	26.39	63.12
Solyc08g029190.2.1	Tomato	nucleus	52.92	56.95
PGSC0003DMT400038437	Potato	cytosol	52.78	56.89
PGSC0003DMT400049152	Potato	cytosol	52.78	56.89
Solyc06g065910.2.1	Tomato	cytosol	53.75	56.5
PGSC0003DMT400067142	Potato	cytosol	53.33	56.06
KRH61724	Soybean	cytosol	55.42	54.96
VIT_04s0008g06310.t01	Wine grape	mitochondrion	56.94	54.59
GSMUA_Achr7P05370_001	Banana	cytosol	47.5	52.45
GSMUA_Achr4P20360_001	Banana	cytosol	48.33	51.94
GSMUA_Achr3P00890_001	Banana	cytosol	48.33	51.79
Zm00001d021400_P001	Maize	cytosol	48.33	50.66
Os09t0556200-00	Rice	cytosol, plasma membrane	48.06	50.44
EER97166	Sorghum	cytosol	48.47	50.43
GSMUA_Achr4P04120_001	Banana	cytosol	35.0	49.22
TraesCS5D01G366100.1	Wheat	cytosol	46.94	48.63
TraesCS5A01G357000.1	Wheat	cytosol	46.53	48.2
TraesCS5B01G359500.1	Wheat	cytosol	46.53	48.06
HORVU5Hr1G088290.2	Barley	cytosol	46.39	47.92
GSMUA_Achr9P22500_001	Banana	cytosol	45.69	47.75
KRH52396	Soybean	cytosol	6.67	46.6
Os08t0296900-01	Rice	cytosol	46.11	42.89
Zm00001d024424_P001	Maize	cytosol	43.47	42.24
EES13437	Sorghum	cytosol	43.19	41.86
KRH05202	Soybean	cytosol	20.14	41.67
CDX70924	Canola	cytosol	34.58	39.09
Zm00001d037923_P001	Maize	cytosol	8.75	38.89
CDY51850	Canola	cytosol	33.89	38.36
EER96429	Sorghum	plastid	45.0	34.88
Zm00001d019666_P001	Maize	plastid	44.17	34.3
TraesCS5A01G163200.1	Wheat	cytosol	42.92	33.05
TraesCS5B01G160600.1	Wheat	cytosol	42.92	33.05
TraesCS5D01G168200.1	Wheat	cytosol	42.92	33.05
HORVU5Hr1G050890.1	Barley	cytosol	42.64	32.73
CDY69227	Canola	cytosol	21.67	32.43
CDY30038	Canola	cytosol, plastid	34.58	30.15
TraesCS5D01G165100.1	Wheat	cytosol	12.92	24.16
HORVU5Hr1G050130.1	Barley	cytosol	12.78	23.17
TraesCS5B01G157700.1	Wheat	cytosol	12.5	21.23
TraesCS5A01G160000.1	Wheat	cytosol	11.11	20.2

Protein Annotations

Gene3D:1.25.40.10	MapMan:20.2.4.5	Gene3D:3.10.20.90	EnsemblPlants:CDX83226	ProteinID:CDX83226	ProteinID:CDX83226.1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00138773001	InterPro:IPR000270	InterPro:IPR011990
InterPro:IPR013026	InterPro:IPR019734	InterPro:PB1_dom	PFAM:PF00564	PFscan:PS50293	PFscan:PS51745
PANTHER:PTHR22904	PANTHER:PTHR22904:SF419	SMART:SM00028	SMART:SM00666	SUPFAM:SSF48452	SUPFAM:SSF54277
InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI0004EDCC93	SEG:seg	:

Description

BnaA03g22800D

Coordinates

chrLK031832:+:530306..532677

Molecular Weight (calculated)

81595.5 Da

IEP (calculated)

4.994

GRAVY (calculated)

-0.609

Length

720 amino acids

Sequence
(BLAST)

001: MGKPTGKKKN PDTPPRDSSS RGGGGGGNKS GKSLDRSASK ADEDMTIFIN RALELKEEGN KLFQRRDTEG AMLRYDKAVK LLPRDHGDDV AYLRTCMASC
101: YMQMGLGEYP NAINECNLAL EASPKHSKAL LKRARCYEAL HKMDFAFRDS RLVLSMEPEN VSANEIFERV KKVLVAKGVD LVELEKSFLH VEPVGAARLR
201: KIKLEDKVVV EEKTVNAEKD SSKVEDGDSR RKKLEEEKKA TSPVMDKEVI ASEIDPKVTR TVKLVHGDDI RWAQLPLDSS VRLVRDVIKD RYPSLKGFLI
301: KYRDQEGDLV TITTTDELRL AASTREKLGS FRLYVTEVSP NQEPTYEGSM NNEESTDKFA KGSSSVGECV ESEKASAGLD HWIFQFAQLF KNHVGFDSGS
401: YLDLHNLGMK LYTEGMEDTV TGEDAQELFD IAADKFQEMA ALALFNWGNI HMSKARRQIY FPEDGSRETI LEKVEAGFEW ATKEYNKAAE KYEEAVKVKY
501: DFYEAYLALG QQQFEQAKLC WYHALGNKTI DVDSDASQDV LKLYNKAEES MEKGMQIWEE MEERRLNGIS NFDQHKEMLQ KLGLDGVFSE TSDEENTEKT
601: ANMSSQINLL WGSLLYERSI VEYKLGLPTW DECMEAAVEK FELAGASATD IAVMVKNHCS NENALEGMGF KIDEIVQAWN EMYDAKRWQI GVPSFRLEPL
701: FRRRSPKLHD ILENVFSGPQ

Best Arabidopsis Sequence Match ( AT2G25290.2 )
(BLAST)

001: MGKPTGKKKN NNYTEMPPTE SSTTGGGKTG KSFDRSATKS FDDDMTIFIN RALELKEEGN KLFQKRDYEG AMFRYDKAVK LLPRDHGDVA YLRTSMASCY
101: MQMGLGEYPN AINECNLALE ASPRFSKALL KRARCYEALN KLDFAFRDSR VVLNMEPENV SANEIFERVK KVLVGKGIDV DEMEKNLVNV QPVGAARLRK
201: IVKERLRKKK KKSMTMTNGG NDGERKSVEA VVEDAKVDNG EEVDSGRKGK AIEEKKLEDK VAVMDKEVIA SEIKEDATVT RTVKLVHGDD IRWAQLPLDS
301: SVVLVRDVIK DRFPALKGFL IKYRDSEGDL VTITTTDELR LAASTREKLG SFRLYIAEVS PNQEPTYDVI DNDESTDKFA KGSSSVADNG SVGDFVESEK
401: ASTSLEHWIF QFAQLFKNHV GFDSDSYLEL HNLGMKLYTE AMEDIVTGED AQELFDIAAD KFQEMAALAM FNWGNVHMSK ARRQIYFPED GSRETILEKV
501: EAGFEWAKNE YNKAAEKYEG AVKIKSDFYE ALLALGQQQF EQAKLCWYHA LSGEVDIESD ASQDVLKLYN KAEESMEKGM QIWEEMEERR LNGISNFDKH
601: KELLQKLGLD GIFSEASDEE SAEQTANMSS QINLLWGSLL YERSIVEYKL GLPTWDECLE VAVEKFELAG ASATDIAVMV KNHCSSDNAL EGMGFKIDEI
701: VQAWNEMYDA KRWQIGVPSF RLEPLFRRRS PKLHDILENV FSGPQ

Arabidopsis Description

Phox1Phox1 [Source:UniProtKB/TrEMBL;Acc:A0A178VW51]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.