Factsheet for HORVU5Hr1G050130.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G019530.1
HORVU5Hr1G032550.3

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G32070.1	HORVU4Hr1G019530.1	AT4G09570.1	19130088
AT4G32070.1	HORVU5Hr1G032550.3	AT4G09570.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G165100.1	Wheat	cytosol	74.31	76.62
TraesCS5A01G160000.1	Wheat	cytosol	39.55	39.65
TraesCS5B01G157700.1	Wheat	cytosol	41.81	39.15
KRH05202	Soybean	cytosol	25.44	29.02
KRH52396	Soybean	cytosol	5.79	22.33
GSMUA_Achr7P05370_001	Banana	cytosol	25.94	15.8
HORVU5Hr1G088290.2	Barley	cytosol	27.2	15.49
GSMUA_Achr3P00890_001	Banana	cytosol	26.2	15.48
GSMUA_Achr4P20360_001	Banana	cytosol	25.94	15.37
CDX70924	Canola	cytosol	24.18	15.07
Solyc06g065910.2.1	Tomato	cytosol	25.69	14.89
GSMUA_Achr9P22500_001	Banana	cytosol	25.69	14.8
CDY51850	Canola	cytosol	23.68	14.78
PGSC0003DMT400067142	Potato	cytosol	25.44	14.74
VIT_11s0118g00490.t01	Wine grape	cytosol	24.94	14.6
KRH61724	Soybean	cytosol	26.7	14.6
Os08t0296900-01	Rice	cytosol	28.21	14.47
Bra006557.1-P	Field mustard	cytosol	23.93	14.29
CDY13473	Canola	nucleus	25.94	14.25
HORVU5Hr1G050890.1	Barley	cytosol	33.5	14.18
CDX72344	Canola	nucleus	24.94	14.1
Solyc08g029190.2.1	Tomato	nucleus	23.68	14.05
Bra023964.1-P	Field mustard	nucleus	25.69	14.03
VIT_04s0008g06310.t01	Wine grape	mitochondrion	26.45	13.98
CDY11535	Canola	nucleus	24.69	13.88
CDY58928	Canola	cytosol	24.43	13.88
PGSC0003DMT400049152	Potato	cytosol	23.17	13.77
PGSC0003DMT400038437	Potato	cytosol	23.17	13.77
EES13437	Sorghum	cytosol	25.69	13.73
CDX68815	Canola	cytosol, nucleus, plastid	23.43	13.62
Bra007805.1-P	Field mustard	nucleus	25.69	13.51
CDY38510	Canola	nucleus	23.68	13.51
Zm00001d024424_P001	Maize	cytosol	24.94	13.36
AT2G25290.4	Thale cress	cytosol	24.94	13.29
Solyc07g007390.2.1	Tomato	nucleus	25.69	13.11
CDX75218	Canola	cytosol	23.43	12.83
CDX83226	Canola	cytosol	23.17	12.78
Bra011320.1-P	Field mustard	cytosol, nucleus, plastid	23.17	12.74
KRH37816	Soybean	cytosol	23.43	12.74
PGSC0003DMT400078952	Potato	cytosol	25.94	12.7
KRH20222	Soybean	nucleus	22.92	12.57
KRH03587	Soybean	nucleus	22.92	12.55
AT4G32070.1	Thale cress	nucleus	24.69	12.53
Bra000549.1-P	Field mustard	nucleus	23.68	12.29
AT5G20360.1	Thale cress	cytosol	21.91	10.75
HORVU5Hr1G051200.1	Barley	mitochondrion	20.15	9.88
GSMUA_Achr4P04120_001	Banana	cytosol	7.81	6.05
KRG84467	Soybean	cytosol	0.76	2.31
KRH05201	Soybean	cytosol	1.01	1.33

Protein Annotations

Gene3D:1.25.40.10	MapMan:20.2.4.5	UniProt:A0A287R5Z8	ncoils:Coil	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	EnsemblPlantsGene:HORVU5Hr1G050130	EnsemblPlants:HORVU5Hr1G050130.1	InterPro:IPR000270	InterPro:IPR011990	InterPro:IPR013026
InterPro:IPR019734	InterPro:PB1_dom	PFAM:PF00564	PFscan:PS50005	PFscan:PS50293	PFscan:PS51745
PANTHER:PTHR22904	PANTHER:PTHR22904:SF419	SMART:SM00028	SUPFAM:SSF48452	SUPFAM:SSF54277	InterPro:TPR-contain_dom
InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI000B468B8C	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr5H:-:388701964..388703597

Molecular Weight (calculated)

44167.5 Da

IEP (calculated)

4.217

GRAVY (calculated)

-0.742

Length

397 amino acids

Sequence
(BLAST)

001: MSSEQEHPEV SEVEEEEVEK DEDAAIVELV TELKQEGTTL FRLRDYDGAA FKFDEAIRLS PRAPRAYNEN DIASLHSNVA ACYMHMNAHR PEDDYHYHQA
101: IDRCNMALDA SPRYTKALLK RARCFEALDR LDLACVDVQE VLTLEPNNAV ALELLESLRE EMEEKKFLLE QEARSLDDLI KVISASEKVA KQFSSTIATA
201: ADPAKNALYT ESTDGHDTDT EGILIHGEQD DDHVSYDDNG GEEAPRGQSE EEAHVGDQSG QHKHEEEDGG NAEHHTGAEN SAGSGATRCV EFVLGEEGDV
301: RRIALLPQDG GLAQLMDIAR SKFPDLKELS VHFKDDRGDL VTVDSTTDQS IWFDEANSGS QGPLRLYVTQ GNRERVSCPE QPIREQDAAD PCLSHDQ

Best Arabidopsis Sequence Match ( AT2G25290.1 )
(BLAST)

001: MGKPTGKKKN NNYTEMPPTE SSTTGGGKTG KSFDRSATKS FDDDMTIFIN RALELKEEGN KLFQKRDYEG AMFRYDKAVK LLPRDHGDVA YLRTSMASCY
101: MQMGLGEYPN AINECNLALE ASPRFSKALL KRARCYEALN KLDFAFRDSR VVLNMEPENV SANEIFERVK KVLVGKGIDV DEMEKNLVNV QPVGAARLRK
201: IVKERLRKKK KKSMTMTNGG NDGERKSVEA VVEDAKVDNG EEVDSGRKGK AIEEKKLEDK VAVMDKEVIA SEIKEDATVT RTVKLVHGDD IRWAQLPLDS
301: SVVLVRDVIK DRFPALKGFL IKYRDSEGDL VTITTTDELR LAASTREKLG SFRLYIAEVS PNQEPTYDVI DNDESTDKFA KGSSSVADNG SVGDFVESEK
401: ASTSLEHWIF QFAQLFKNHV GFDSDSYLEL HNLGMKLYTE AMEDIVTGED AQELFDIAAD KFQEMAALAM FNWGNVHMSK ARRQIYFPED GSRETILEKV
501: EAGFEWAKNE YNKAAEKYEG AVKIKSDFYE ALLALGQQQF EQAKLCWYHA LSGEVDIESD ASQDVLKLYN KAEESMEKGM QIWEEMEERR LNGISNFDKH
601: KELLQKLGLD GIFSEASDEE SAEQTANMSS QINLLWGSLL YERSIVEYKL GLPTWDECLE VAVEKFELAG ASATDIAVMV KNHCSSDNAL EGMGFKIDEI
701: VQAWNEMYDA KRWQIGVPSF RLEPLFRRRS PKLHDILENV FSGPQ

Arabidopsis Description

Phox1Phox1 [Source:UniProtKB/TrEMBL;Acc:A0A178VW51]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.