Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
25464976
nucleus: 28394025 |
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400078952 | Potato | cytosol | 96.14 | 92.23 |
| VIT_11s0118g00490.t01 | Wine grape | cytosol | 59.51 | 68.29 |
| KRH20222 | Soybean | nucleus | 56.56 | 60.77 |
| Solyc08g029190.2.1 | Tomato | nucleus | 51.54 | 59.94 |
| KRH03587 | Soybean | nucleus | 55.66 | 59.72 |
| KRH37816 | Soybean | cytosol | 55.01 | 58.63 |
| GSMUA_Achr3P00890_001 | Banana | cytosol | 50.51 | 58.48 |
| Solyc06g065910.2.1 | Tomato | cytosol | 51.41 | 58.39 |
| GSMUA_Achr4P20360_001 | Banana | cytosol | 50.26 | 58.36 |
| GSMUA_Achr7P05370_001 | Banana | cytosol | 48.2 | 57.52 |
| Os09t0556200-00 | Rice | cytosol, plasma membrane | 48.2 | 54.66 |
| EER97166 | Sorghum | cytosol | 48.33 | 54.34 |
| Zm00001d021400_P001 | Maize | cytosol | 47.81 | 54.15 |
| TraesCS5D01G366100.1 | Wheat | cytosol | 47.43 | 53.09 |
| TraesCS5A01G357000.1 | Wheat | cytosol | 47.17 | 52.81 |
| HORVU5Hr1G088290.2 | Barley | cytosol | 47.17 | 52.65 |
| TraesCS5B01G359500.1 | Wheat | cytosol | 47.17 | 52.65 |
| GSMUA_Achr9P22500_001 | Banana | cytosol | 46.53 | 52.54 |
| GSMUA_Achr4P04120_001 | Banana | cytosol | 34.32 | 52.15 |
| EES13437 | Sorghum | cytosol | 43.19 | 45.22 |
| Zm00001d024424_P001 | Maize | cytosol | 42.8 | 44.94 |
| CDY51850 | Canola | cytosol | 36.25 | 44.34 |
| Os08t0296900-01 | Rice | cytosol | 43.83 | 44.06 |
| CDX70924 | Canola | cytosol | 35.86 | 43.8 |
| Bra006557.1-P | Field mustard | cytosol | 36.76 | 43.01 |
| Zm00001d037923_P001 | Maize | cytosol | 8.48 | 40.74 |
| AT5G20360.1 | Thale cress | cytosol | 38.95 | 37.45 |
| EER96429 | Sorghum | plastid | 43.7 | 36.6 |
| Zm00001d019666_P001 | Maize | plastid | 43.32 | 36.35 |
| TraesCS5D01G168200.1 | Wheat | cytosol | 42.8 | 35.62 |
| TraesCS5B01G160600.1 | Wheat | cytosol | 42.55 | 35.4 |
| TraesCS5A01G163200.1 | Wheat | cytosol | 42.29 | 35.19 |
| Solyc02g036360.1.1 | Tomato | nucleus | 34.32 | 35.09 |
| Solyc02g081200.1.1 | Tomato | nucleus | 34.96 | 34.96 |
| HORVU5Hr1G050890.1 | Barley | cytosol | 41.26 | 34.22 |
| TraesCS5D01G165100.1 | Wheat | cytosol | 13.24 | 26.75 |
| HORVU5Hr1G050130.1 | Barley | cytosol | 13.11 | 25.69 |
| TraesCS5B01G157700.1 | Wheat | cytosol | 13.37 | 24.53 |
| TraesCS5A01G160000.1 | Wheat | cytosol | 12.21 | 23.99 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:20.2.4.5 | Gene3D:3.10.20.90 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR000270 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 | UniProt:K4CBK9 |
| InterPro:PB1_dom | PFAM:PF00564 | PFscan:PS50005 | PFscan:PS50293 | PANTHER:PTHR22904 | PANTHER:PTHR22904:SF392 |
| SMART:SM00028 | SMART:SM00666 | SUPFAM:SSF48452 | SUPFAM:SSF54277 | EnsemblPlantsGene:Solyc07g007390.2 | EnsemblPlants:Solyc07g007390.2.1 |
| InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | UniParc:UPI000276ABDD | SEG:seg | : |
Description
No Description!
Coordinates
chr7:+:2125803..2128660
Molecular Weight (calculated)
89513.6 Da
IEP (calculated)
4.933
GRAVY (calculated)
-0.740
Length
778 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKESWTKSK KIGGKSGESS SPRAFDKDTA VFIAMSKELK DEGNKLFQKR DYEGAMLKYD KAIKLLPRNH IDVSYLRSNI AACYMQMGLS EYPRAIHECN
101: LALEVTPKYS KALLKRARCY EALNRLDLAQ RDVNRVLEME PNNLMATEIA ERVKTTIEER GIGVNDIPVD LIPVPEYVEP TFVSSHSKSS KEKALKKKIK
201: KVEEKMVNGK AEEKEFDAGV DLKQTDNRNE ERNTEDQNEN TDKDQTKEEK VDDKTEGNKA ENKTNRKKAK DKSKEKKNKD KIEVNKVKDR FEENKDEDNE
301: ERKTEDKLVV EEIISHTTEE EPKRTVKLVF GDDIRWAQVP VDCSILTLRE IIGDRFPSLK AVLIKYRDQE GDLVTVTTNE ELRWAEASVG HGSIRFYIVE
401: VSPEQDPFYE KIKGVEDDHK YNARHDKIVE NGNVETSKEL HNGPVCINDW IFQFSNLFKN YVGFESDDYL DLHEVGMKLY SEALEEAITS EEAQYLFSTA
501: GETFQEMAAL ALFNWGNVHM SRARKRVYLK EDSSGESLLA QIKIAYDWAL KEYSKAGERY EEALNIKPNF YEGILALGQQ QFEQAKLSWY YTISTGVNLD
601: SWPSTEVLQL YNSAEENMER GMQMWEEAEE QRLNELSSTN KLQKMKSENL FKGISADEAS EQAANMMSQI NLLWGTMLYE RSLMEFKLGL PLWQESLEVA
701: VEKFELAGAS PTDIAVMIKN HCSNSTATEG LGFNIDEIVQ AWNEMYEAKR WERGVPSFRL EPLLRRRVSK LYHALELA
101: LALEVTPKYS KALLKRARCY EALNRLDLAQ RDVNRVLEME PNNLMATEIA ERVKTTIEER GIGVNDIPVD LIPVPEYVEP TFVSSHSKSS KEKALKKKIK
201: KVEEKMVNGK AEEKEFDAGV DLKQTDNRNE ERNTEDQNEN TDKDQTKEEK VDDKTEGNKA ENKTNRKKAK DKSKEKKNKD KIEVNKVKDR FEENKDEDNE
301: ERKTEDKLVV EEIISHTTEE EPKRTVKLVF GDDIRWAQVP VDCSILTLRE IIGDRFPSLK AVLIKYRDQE GDLVTVTTNE ELRWAEASVG HGSIRFYIVE
401: VSPEQDPFYE KIKGVEDDHK YNARHDKIVE NGNVETSKEL HNGPVCINDW IFQFSNLFKN YVGFESDDYL DLHEVGMKLY SEALEEAITS EEAQYLFSTA
501: GETFQEMAAL ALFNWGNVHM SRARKRVYLK EDSSGESLLA QIKIAYDWAL KEYSKAGERY EEALNIKPNF YEGILALGQQ QFEQAKLSWY YTISTGVNLD
601: SWPSTEVLQL YNSAEENMER GMQMWEEAEE QRLNELSSTN KLQKMKSENL FKGISADEAS EQAANMMSQI NLLWGTMLYE RSLMEFKLGL PLWQESLEVA
701: VEKFELAGAS PTDIAVMIKN HCSNSTATEG LGFNIDEIVQ AWNEMYEAKR WERGVPSFRL EPLLRRRVSK LYHALELA
001: MGKPTAKKKN PETPKDASGG GGGGGGKSGK TYHRSTSRVF DEDMEIFISR ALELKEEGNK LFQKRDHEGA MLSFDKALKL LPKDHIDVAY LRTSMASCYM
101: QMGLGEYPNA ISECNLALEA SPRYSKALVR RSRCYEALNK LDYAFRDARI VLNMEPGNVS ANEIFDRVKK VLVDKGIDVD EMEKDFVDVQ PVCAARLKKI
201: VKERLRKSKK KKKSGGKDEE LKSPKVVVVD KGDEAEGRNK PKEEKSDKSD IDGKIGGKRE EKKTSFKSDK GQKKKSGGNK AGEERKVEDK VVVMDKEVIA
301: SEIVDGGGSK KEGATVTRTI KLVHGDDIRW AQLPLDSTVR LVRDVIRDRF PALRGFLIKY RDTEGDLVTI TTTDELRLAA STHDKLGSLR LYIAEVNPDQ
401: EPTYDGMSNT ESTDKVSKRL SSLADNGSVG EYVGSDKASG CFENWIFQFA QLFKNHVGFD SDSYVDLHDL GMKLYTEAME DAVTGEDAQE LFQIAADKFQ
501: EMGALALLNW GNVHMSKARK QVCIPEDASR EAIIEAVEAA FVWTQNEYNK AAEKYEEAIK VKPDFYEALL ALGQEQFEHA KLCWYHALKS KVDLESEASQ
601: EVLKLYNKAE DSMERGMQIW EEMEECRLNG ISKLDKHKNM LRKLELDELF SEASEEETVE QTANMSSQIN LLWGSLLYER SIVEYKLGLP TWDECLEVAV
701: EKFELAGASA TDIAVMVKNH CSSESALEGM GFKIDEIVQA WNEMYDAKRW QMGVPSFRLE PMFRRRAPKL HDILENVFSG PV
101: QMGLGEYPNA ISECNLALEA SPRYSKALVR RSRCYEALNK LDYAFRDARI VLNMEPGNVS ANEIFDRVKK VLVDKGIDVD EMEKDFVDVQ PVCAARLKKI
201: VKERLRKSKK KKKSGGKDEE LKSPKVVVVD KGDEAEGRNK PKEEKSDKSD IDGKIGGKRE EKKTSFKSDK GQKKKSGGNK AGEERKVEDK VVVMDKEVIA
301: SEIVDGGGSK KEGATVTRTI KLVHGDDIRW AQLPLDSTVR LVRDVIRDRF PALRGFLIKY RDTEGDLVTI TTTDELRLAA STHDKLGSLR LYIAEVNPDQ
401: EPTYDGMSNT ESTDKVSKRL SSLADNGSVG EYVGSDKASG CFENWIFQFA QLFKNHVGFD SDSYVDLHDL GMKLYTEAME DAVTGEDAQE LFQIAADKFQ
501: EMGALALLNW GNVHMSKARK QVCIPEDASR EAIIEAVEAA FVWTQNEYNK AAEKYEEAIK VKPDFYEALL ALGQEQFEHA KLCWYHALKS KVDLESEASQ
601: EVLKLYNKAE DSMERGMQIW EEMEECRLNG ISKLDKHKNM LRKLELDELF SEASEEETVE QTANMSSQIN LLWGSLLYER SIVEYKLGLP TWDECLEVAV
701: EKFELAGASA TDIAVMVKNH CSSESALEGM GFKIDEIVQA WNEMYDAKRW QMGVPSFRLE PMFRRRAPKL HDILENVFSG PV
Arabidopsis Description
Phox4Protein PHOX4 [Source:UniProtKB/Swiss-Prot;Acc:F4JTI1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.