Factsheet for Os09t0556200-00

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

nucleus 2
cytosol 3
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os11t0171500-01
Os12t0169800-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G32070.1	Os11t0171500-01	AT4G09570.1	19130088
AT4G32070.1	Os12t0169800-00	AT4G09570.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021400_P001	Maize	cytosol	86.3	86.17
EER97166	Sorghum	cytosol	86.44	85.69
TraesCS5D01G366100.1	Wheat	cytosol	84.4	83.31
HORVU5Hr1G088290.2	Barley	cytosol	84.55	83.21
TraesCS5A01G357000.1	Wheat	cytosol	84.26	83.17
TraesCS5B01G359500.1	Wheat	cytosol	83.67	82.35
KRG84467	Soybean	cytosol	12.97	68.46
GSMUA_Achr4P20360_001	Banana	cytosol	63.12	64.63
GSMUA_Achr7P05370_001	Banana	cytosol	59.04	62.12
GSMUA_Achr3P00890_001	Banana	cytosol	60.79	62.05
GSMUA_Achr4P04120_001	Banana	cytosol	44.75	59.96
Zm00001d037923_P001	Maize	cytosol	14.14	59.88
KRH05201	Soybean	cytosol	26.09	59.47
VIT_11s0118g00490.t01	Wine grape	cytosol	56.12	56.78
Solyc08g029190.2.1	Tomato	nucleus	54.37	55.75
PGSC0003DMT400049152	Potato	cytosol	53.64	55.09
PGSC0003DMT400038437	Potato	cytosol	53.64	55.09
GSMUA_Achr9P22500_001	Banana	cytosol	54.81	54.57
Solyc06g065910.2.1	Tomato	cytosol	52.48	52.55
CDX68815	Canola	cytosol, nucleus, plastid	52.04	52.27
PGSC0003DMT400067142	Potato	cytosol	51.46	51.53
VIT_04s0008g06310.t01	Wine grape	mitochondrion	56.27	51.4
KRH61724	Soybean	cytosol	53.35	50.41
CDX75218	Canola	cytosol	53.06	50.21
CDY58928	Canola	cytosol	51.02	50.07
CDY38510	Canola	nucleus	50.73	50.0
Bra011320.1-P	Field mustard	cytosol, nucleus, plastid	52.33	49.72
CDY11535	Canola	nucleus	51.17	49.72
KRH20222	Soybean	nucleus	51.31	48.62
KRH37816	Soybean	cytosol	51.31	48.22
Solyc07g007390.2.1	Tomato	nucleus	54.66	48.2
AT2G25290.4	Thale cress	cytosol	52.33	48.19
KRH03587	Soybean	nucleus	50.87	48.14
Os08t0296900-01	Rice	cytosol	54.23	48.06
CDX83226	Canola	cytosol	50.44	48.06
CDY13473	Canola	nucleus	50.44	47.86
CDX72344	Canola	nucleus	48.4	47.29
Bra023964.1-P	Field mustard	nucleus	49.85	47.04
Bra007805.1-P	Field mustard	nucleus	51.75	47.02
Bra000549.1-P	Field mustard	nucleus	51.17	45.88
PGSC0003DMT400078952	Potato	cytosol	53.94	45.62
AT4G32070.1	Thale cress	nucleus	51.31	45.01
KRH52396	Soybean	cytosol	6.56	43.69
KRH05202	Soybean	cytosol	19.97	39.37
CDY51850	Canola	cytosol	35.28	38.05
CDX70924	Canola	cytosol	34.69	37.36
Bra006557.1-P	Field mustard	cytosol	35.71	36.84
Os09t0135400-01	Rice	nucleus	37.61	32.82
AT5G20360.1	Thale cress	cytosol	36.88	31.27

Protein Annotations

Gene3D:1.25.40.10	MapMan:20.2.4.5	Gene3D:3.10.20.90	EntrezGene:4347818	UniProt:A3C1D8	ProteinID:BAT09358.1
ncoils:Coil	ProteinID:EAZ45627.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000270
InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	EnsemblPlantsGene:Os09g0556200	EnsemblPlants:Os09t0556200-00	InterPro:PB1_dom
PFAM:PF00564	PFscan:PS50005	PFscan:PS50293	PFscan:PS51745	PANTHER:PTHR22904	PANTHER:PTHR22904:SF429
SMART:SM00028	SMART:SM00666	SUPFAM:SSF48452	SUPFAM:SSF54277	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf
InterPro:TPR_repeat	UniParc:UPI0000F1A831	RefSeq:XP_015612450.1	SEG:seg	:	:

Description

Similar to predicted protein. (Os09t0556200-00)

Coordinates

chr9:+:22098832..22102375

Molecular Weight (calculated)

77605.9 Da

IEP (calculated)

5.093

GRAVY (calculated)

-0.596

Length

686 amino acids

Sequence
(BLAST)

001: MGKPSLKKKS GGGKSGEHGG GGKPALDRSG SKVLDGDETI FTDMAQELKE EGNKLFQRRE HERALLNYEK AIKLLPRGHP DVAYLHSNLA ACYMQMSPPD
101: HYRAINECNL ALDASPRYSK ALLKRARCFE ALGRLDLAYR DVAKVLAVEP NNLTAIDVGD RVKKAMDEKG IVMDDKEAMP SPEEVVAAAP KQKPRKKKGR
201: KAAAKAAAAA VEEEEEAKVV EPVKEVEEPP RQVKLVFGED IRWAQVPASC SMAQLREAVR SKFPGLKAVL VKYKDKEGDL VTITNQDELK WAEDLAEPGS
301: SLRLYVTEAN PEHEPYLDDT NSGPLERNVN SDNGSTRSNR QDEDRSTVTC IDDWIVQFAR LFKNHVGVSS DEYLDLHEVS MKLYTEAIED TITTEEAQEV
401: FQLAESNFQE MAALAFFHWG NVHMSRARKR LLLPGDSPQE SVLEQVKEAY EWAKEEYNKA GRRYEEAVKA KPNFFEGFLA LAHQHFEQAK LSWYYAIGSS
501: VDLDTWPSSE VLELFNKAED NMERGTEMWE EMEEQRLKNR SKPSQENVVL EKMGLDEYIK DVSTDDAAEQ ASNMRSQINI LWGMLLYERS VVEFKLGLPM
601: WEDCLMAAIE KFKLGGASAT DIAVLVKNHC ANETAQDGLG FKIDEIVQAW NEMYDIKRWL RGVPSFRLEP LFRRRVPQLH TALEHI

Best Arabidopsis Sequence Match ( AT4G32070.1 )
(BLAST)

001: MGKPTAKKKN PETPKDASGG GGGGGGKSGK TYHRSTSRVF DEDMEIFISR ALELKEEGNK LFQKRDHEGA MLSFDKALKL LPKDHIDVAY LRTSMASCYM
101: QMGLGEYPNA ISECNLALEA SPRYSKALVR RSRCYEALNK LDYAFRDARI VLNMEPGNVS ANEIFDRVKK VLVDKGIDVD EMEKDFVDVQ PVCAARLKKI
201: VKERLRKSKK KKKSGGKDEE LKSPKVVVVD KGDEAEGRNK PKEEKSDKSD IDGKIGGKRE EKKTSFKSDK GQKKKSGGNK AGEERKVEDK VVVMDKEVIA
301: SEIVDGGGSK KEGATVTRTI KLVHGDDIRW AQLPLDSTVR LVRDVIRDRF PALRGFLIKY RDTEGDLVTI TTTDELRLAA STHDKLGSLR LYIAEVNPDQ
401: EPTYDGMSNT ESTDKVSKRL SSLADNGSVG EYVGSDKASG CFENWIFQFA QLFKNHVGFD SDSYVDLHDL GMKLYTEAME DAVTGEDAQE LFQIAADKFQ
501: EMGALALLNW GNVHMSKARK QVCIPEDASR EAIIEAVEAA FVWTQNEYNK AAEKYEEAIK VKPDFYEALL ALGQEQFEHA KLCWYHALKS KVDLESEASQ
601: EVLKLYNKAE DSMERGMQIW EEMEECRLNG ISKLDKHKNM LRKLELDELF SEASEEETVE QTANMSSQIN LLWGSLLYER SIVEYKLGLP TWDECLEVAV
701: EKFELAGASA TDIAVMVKNH CSSESALEGM GFKIDEIVQA WNEMYDAKRW QMGVPSFRLE PMFRRRAPKL HDILENVFSG PV

Arabidopsis Description

Phox4Protein PHOX4 [Source:UniProtKB/Swiss-Prot;Acc:F4JTI1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.