CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG91803
KRH34983
KRH34984

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G32070.1	KRG91803	AT4G09570.1	19130088
AT4G32070.1	KRH34983	AT4G09570.1	19130088
AT4G32070.1	KRH34984	AT4G09570.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037923_P001	Maize	cytosol	50.77	40.74
KRH05201	Soybean	cytosol	62.31	26.91
Solyc08g029190.2.1	Tomato	nucleus	75.38	14.65
PGSC0003DMT400049152	Potato	cytosol	74.62	14.52
PGSC0003DMT400038437	Potato	cytosol	74.62	14.52
KRH61724	Soybean	cytosol	80.77	14.46
Solyc06g065910.2.1	Tomato	cytosol	73.85	14.01
PGSC0003DMT400067142	Potato	cytosol	73.85	14.01
GSMUA_Achr4P20360_001	Banana	cytosol	71.54	13.88
CDY58928	Canola	cytosol	74.62	13.88
CDY38510	Canola	nucleus	73.85	13.79
CDX68815	Canola	cytosol, nucleus, plastid	72.31	13.76
CDY11535	Canola	nucleus	74.62	13.74
GSMUA_Achr4P04120_001	Banana	cytosol	53.08	13.48
CDX83226	Canola	cytosol	73.08	13.19
CDX72344	Canola	nucleus	70.77	13.11
GSMUA_Achr3P00890_001	Banana	cytosol	67.69	13.1
CDY13473	Canola	nucleus	72.31	13.0
Os09t0556200-00	Rice	cytosol, plasma membrane	68.46	12.97
CDX75218	Canola	cytosol	72.31	12.97
Bra023964.1-P	Field mustard	nucleus	72.31	12.93
AT2G25290.4	Thale cress	cytosol	73.85	12.89
GSMUA_Achr7P05370_001	Banana	cytosol	64.62	12.88
Bra007805.1-P	Field mustard	nucleus	74.62	12.85
Zm00001d021400_P001	Maize	cytosol	67.69	12.81
VIT_04s0008g06310.t01	Wine grape	mitochondrion	73.85	12.78
Bra011320.1-P	Field mustard	cytosol, nucleus, plastid	70.77	12.74
EER97166	Sorghum	cytosol	67.69	12.72
Bra000549.1-P	Field mustard	nucleus	73.85	12.55
KRH20222	Soybean	nucleus	69.23	12.43
AT4G32070.1	Thale cress	nucleus	73.85	12.28
KRH03587	Soybean	nucleus	68.46	12.28
TraesCS5D01G366100.1	Wheat	cytosol	64.62	12.09
TraesCS5A01G357000.1	Wheat	cytosol	63.85	11.94
HORVU5Hr1G088290.2	Barley	cytosol	63.85	11.91
TraesCS5B01G359500.1	Wheat	cytosol	63.08	11.76
KRH37816	Soybean	cytosol	65.38	11.64
Os08t0296900-01	Rice	cytosol	64.62	10.85
GSMUA_Achr9P22500_001	Banana	cytosol	56.92	10.74
EES13437	Sorghum	cytosol	60.0	10.5
Zm00001d024424_P001	Maize	cytosol	59.23	10.39
Zm00001d019666_P001	Maize	plastid	60.0	8.41
EER96429	Sorghum	plastid	60.0	8.4
TraesCS5A01G163200.1	Wheat	cytosol	59.23	8.24
TraesCS5B01G160600.1	Wheat	cytosol	59.23	8.24
TraesCS5D01G168200.1	Wheat	cytosol	59.23	8.24
HORVU5Hr1G050890.1	Barley	cytosol	58.46	8.1
KRH51148	Soybean	cytosol	30.0	5.07
KRH02008	Soybean	nucleus	30.0	5.03
KRH52396	Soybean	cytosol	2.31	2.91
TraesCS5A01G160000.1	Wheat	cytosol	3.08	1.01
TraesCS5D01G165100.1	Wheat	cytosol	2.31	0.78
HORVU5Hr1G050130.1	Barley	cytosol	2.31	0.76
TraesCS5B01G157700.1	Wheat	cytosol	2.31	0.71
KRH05202	Soybean	cytosol	1.54	0.57

Protein Annotations

EnsemblPlants:KRG84467	EnsemblPlantsGene:GLYMA_U004300	EntrezGene:102665813	PANTHER:PTHR22904	PANTHER:PTHR22904:SF419	ProteinID:KRG84467
ProteinID:KRG84467.1	UniParc:UPI00023DCF0F	UniProt:K7LWQ7	MapMan:20.2.4.5	:	:

Description

hypothetical protein

Coordinates

chrscaffold_1317:-:3337..4138

Molecular Weight (calculated)

15181.2 Da

IEP (calculated)

4.467

GRAVY (calculated)

-0.216

Length

130 amino acids

Sequence
(BLAST)

001: MGLHGLFRDV SSDEADDQAA RMRLQVYLLW GTLLYERSVV EYKLGLPTWE ECLEVAVEKF ELAGASTTDI GVMIKNHCSN ETAMEGFKID EIVQAWNEMY
101: DGWQFDVPSF RLEPLFRRRV PKLHYILEQF

Best Arabidopsis Sequence Match ( AT2G25290.1 )
(BLAST)

001: MGKPTGKKKN NNYTEMPPTE SSTTGGGKTG KSFDRSATKS FDDDMTIFIN RALELKEEGN KLFQKRDYEG AMFRYDKAVK LLPRDHGDVA YLRTSMASCY
101: MQMGLGEYPN AINECNLALE ASPRFSKALL KRARCYEALN KLDFAFRDSR VVLNMEPENV SANEIFERVK KVLVGKGIDV DEMEKNLVNV QPVGAARLRK
201: IVKERLRKKK KKSMTMTNGG NDGERKSVEA VVEDAKVDNG EEVDSGRKGK AIEEKKLEDK VAVMDKEVIA SEIKEDATVT RTVKLVHGDD IRWAQLPLDS
301: SVVLVRDVIK DRFPALKGFL IKYRDSEGDL VTITTTDELR LAASTREKLG SFRLYIAEVS PNQEPTYDVI DNDESTDKFA KGSSSVADNG SVGDFVESEK
401: ASTSLEHWIF QFAQLFKNHV GFDSDSYLEL HNLGMKLYTE AMEDIVTGED AQELFDIAAD KFQEMAALAM FNWGNVHMSK ARRQIYFPED GSRETILEKV
501: EAGFEWAKNE YNKAAEKYEG AVKIKSDFYE ALLALGQQQF EQAKLCWYHA LSGEVDIESD ASQDVLKLYN KAEESMEKGM QIWEEMEERR LNGISNFDKH
601: KELLQKLGLD GIFSEASDEE SAEQTANMSS QINLLWGSLL YERSIVEYKL GLPTWDECLE VAVEKFELAG ASATDIAVMV KNHCSSDNAL EGMGFKIDEI
701: VQAWNEMYDA KRWQIGVPSF RLEPLFRRRS PKLHDILENV FSGPQ

Arabidopsis Description

Phox1Phox1 [Source:UniProtKB/TrEMBL;Acc:A0A178VW51]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.