Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 3
- mitochondrion 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG91803 | Soybean | mitochondrion | 97.15 | 97.55 |
| VIT_18s0072g01030.t01 | Wine grape | cytosol, mitochondrion | 79.88 | 80.37 |
| Bra034407.1-P | Field mustard | cytosol | 81.1 | 80.28 |
| CDY37101 | Canola | cytosol | 81.1 | 80.28 |
| AT1G35670.1 | Thale cress | cytosol | 80.69 | 80.2 |
| CDX73342 | Canola | nucleus, plasma membrane | 80.89 | 80.08 |
| CDX90725 | Canola | cytosol | 80.89 | 79.6 |
| CDY05064 | Canola | cytosol | 80.89 | 79.6 |
| AT4G09570.1 | Thale cress | cytosol | 80.28 | 78.84 |
| GSMUA_Achr9P08680_001 | Banana | cytosol | 74.39 | 77.54 |
| KRH63919 | Soybean | cytosol | 77.64 | 77.02 |
| KRH54032 | Soybean | cytosol | 77.44 | 76.66 |
| PGSC0003DMT400067082 | Potato | cytosol, plastid | 78.05 | 76.65 |
| KRH34983 | Soybean | cytosol | 75.0 | 76.56 |
| GSMUA_Achr2P08110_001 | Banana | cytosol, plastid | 76.83 | 76.36 |
| Solyc06g065380.2.1 | Tomato | cytosol, plastid | 77.85 | 75.54 |
| GSMUA_Achr10P... | Banana | cytosol, plastid | 76.83 | 75.0 |
| GSMUA_Achr6P25560_001 | Banana | cytosol | 72.97 | 74.64 |
| Solyc11g018610.1.1 | Tomato | cytosol | 76.22 | 74.26 |
| KRH59698 | Soybean | plastid | 76.22 | 73.96 |
| KRH41022 | Soybean | plastid | 76.22 | 73.82 |
| PGSC0003DMT400002331 | Potato | cytosol | 75.61 | 73.66 |
| Zm00001d053016_P002 | Maize | cytosol, plastid | 74.39 | 72.05 |
| EES09373 | Sorghum | cytosol, plastid | 75.41 | 72.04 |
| Zm00001d004812_P002 | Maize | plastid | 74.59 | 71.96 |
| TraesCS4B01G109800.2 | Wheat | plastid | 74.59 | 71.54 |
| HORVU5Hr1G032550.3 | Barley | cytosol | 75.41 | 71.35 |
| TraesCS4A01G206200.2 | Wheat | golgi | 74.39 | 71.34 |
| TraesCS4D01G107200.1 | Wheat | plastid | 74.39 | 71.21 |
| EES16732 | Sorghum | cytosol | 74.39 | 71.07 |
| Os11t0171500-01 | Rice | plasma membrane | 73.98 | 70.96 |
| HORVU4Hr1G019530.1 | Barley | plastid | 74.39 | 70.93 |
| TraesCS5B01G115400.1 | Wheat | cytosol | 75.61 | 70.32 |
| TraesCS5D01G122800.1 | Wheat | cytosol | 75.41 | 70.13 |
| Os12t0169800-00 | Rice | plasma membrane | 74.59 | 69.77 |
| Zm00001d023560_P002 | Maize | cytosol | 52.64 | 66.41 |
| TraesCS5A01G107900.1 | Wheat | cytosol | 75.41 | 65.78 |
| KRH74107 | Soybean | cytosol | 66.26 | 59.38 |
| KRH33395 | Soybean | endoplasmic reticulum, nucleus | 69.51 | 58.86 |
| KRG90147 | Soybean | cytosol, plastid | 69.11 | 58.72 |
| KRH14008 | Soybean | cytosol | 66.06 | 58.24 |
| KRH27875 | Soybean | nucleus | 58.94 | 57.43 |
| KRH59992 | Soybean | endoplasmic reticulum | 60.37 | 57.34 |
| KRH72128 | Soybean | plastid | 67.48 | 56.56 |
| KRH32931 | Soybean | plastid | 67.28 | 55.63 |
| KRH73535 | Soybean | cytosol | 58.74 | 54.84 |
| KRH77599 | Soybean | nucleus | 58.74 | 54.73 |
| KRH14593 | Soybean | cytosol | 58.74 | 54.63 |
| KRH51083 | Soybean | endoplasmic reticulum | 57.32 | 53.31 |
| KRH73749 | Soybean | nucleus | 56.91 | 53.03 |
| KRH02072 | Soybean | endoplasmic reticulum, nucleus | 57.72 | 52.79 |
| KRG89696 | Soybean | cytosol, mitochondrion | 58.33 | 52.56 |
| KRH68038 | Soybean | cytosol | 63.01 | 52.54 |
| KRH50623 | Soybean | cytosol | 57.52 | 52.31 |
| KRH17481 | Soybean | cytosol | 56.91 | 52.14 |
| KRG96293 | Soybean | cytosol | 62.8 | 52.11 |
| KRH14398 | Soybean | cytosol, nucleus | 56.71 | 51.76 |
| KRH46181 | Soybean | nucleus | 57.93 | 51.72 |
| KRG98764 | Soybean | cytosol | 57.72 | 51.54 |
| KRH05995 | Soybean | cytosol | 53.25 | 51.07 |
| KRH41261 | Soybean | cytosol | 45.12 | 50.8 |
| KRH05994 | Soybean | cytosol | 51.63 | 47.39 |
Protein Annotations
Description
hypothetical protein
Coordinates
chr10:-:44851172..44856590
Molecular Weight (calculated)
55345.4 Da
IEP (calculated)
5.488
GRAVY (calculated)
-0.322
Length
492 amino acids
Sequence
(BLAST)
(BLAST)
001: MQKHGFASKR NVLPYQTPRL RDHYVLGKKL GQGQFGTTYL CTHKVTGKLY ACKSIPKRKL LCQEDYDDVW REIQIMHHLS EHPNVVQIQG TYEDSVFVHL
101: VMELCAGGEL FDRIIQKGHY SEKEAAKLIK TIVGVVEACH SLGVMHRDLK PENFLFDTPG EDAQMKATDF GLSVFHKPGQ AFHDVVGSPY YVAPEVLCKQ
201: YGPEVDVWSA GVILYILLSG VPPFWAETEA GIFRQILNGD LDFVSEPWPS ISENAKELVK KMLDRDPKKR ISAHEVLCNP WIVDDIAPDK PLDSAVLTRL
301: KLFSAMNKLK KMALRVIAER LSEEEIGGLK ELFKMIDTDN SGTITFEELK AGLKSVGSNL MESEIKSLME AADIDNNGSI DYGEFLAATL HLNKMEREEN
401: LVAAFAYFDK DGSGYITIDE LQQACKDFSL GHVHLDEMIK EIDQDNDGRI DYSEFAAMMK KGDPNMGRSR TMKGNLNFNI ADAFGMKDKD SS
101: VMELCAGGEL FDRIIQKGHY SEKEAAKLIK TIVGVVEACH SLGVMHRDLK PENFLFDTPG EDAQMKATDF GLSVFHKPGQ AFHDVVGSPY YVAPEVLCKQ
201: YGPEVDVWSA GVILYILLSG VPPFWAETEA GIFRQILNGD LDFVSEPWPS ISENAKELVK KMLDRDPKKR ISAHEVLCNP WIVDDIAPDK PLDSAVLTRL
301: KLFSAMNKLK KMALRVIAER LSEEEIGGLK ELFKMIDTDN SGTITFEELK AGLKSVGSNL MESEIKSLME AADIDNNGSI DYGEFLAATL HLNKMEREEN
401: LVAAFAYFDK DGSGYITIDE LQQACKDFSL GHVHLDEMIK EIDQDNDGRI DYSEFAAMMK KGDPNMGRSR TMKGNLNFNI ADAFGMKDKD SS
001: MEKPNPRRPS NSVLPYETPR LRDHYLLGKK LGQGQFGTTY LCTEKSSSAN YACKSIPKRK LVCREDYEDV WREIQIMHHL SEHPNVVRIK GTYEDSVFVH
101: IVMEVCEGGE LFDRIVSKGC FSEREAAKLI KTILGVVEAC HSLGVMHRDL KPENFLFDSP SDDAKLKATD FGLSVFYKPG QYLYDVVGSP YYVAPEVLKK
201: CYGPEIDVWS AGVILYILLS GVPPFWAETE SGIFRQILQG KIDFKSDPWP TISEGAKDLI YKMLDRSPKK RISAHEALCH PWIVDEHAAP DKPLDPAVLS
301: RLKQFSQMNK IKKMALRVIA ERLSEEEIGG LKELFKMIDT DNSGTITFEE LKAGLKRVGS ELMESEIKSL MDAADIDNSG TIDYGEFLAA TLHINKMERE
401: ENLVVAFSYF DKDGSGYITI DELQQACTEF GLCDTPLDDM IKEIDLDNDG KIDFSEFTAM MKKGDGVGRS RTMRNNLNFN IAEAFGVEDT SSTAKSDDSP
501: K
101: IVMEVCEGGE LFDRIVSKGC FSEREAAKLI KTILGVVEAC HSLGVMHRDL KPENFLFDSP SDDAKLKATD FGLSVFYKPG QYLYDVVGSP YYVAPEVLKK
201: CYGPEIDVWS AGVILYILLS GVPPFWAETE SGIFRQILQG KIDFKSDPWP TISEGAKDLI YKMLDRSPKK RISAHEALCH PWIVDEHAAP DKPLDPAVLS
301: RLKQFSQMNK IKKMALRVIA ERLSEEEIGG LKELFKMIDT DNSGTITFEE LKAGLKRVGS ELMESEIKSL MDAADIDNSG TIDYGEFLAA TLHINKMERE
401: ENLVVAFSYF DKDGSGYITI DELQQACTEF GLCDTPLDDM IKEIDLDNDG KIDFSEFTAM MKKGDGVGRS RTMRNNLNFN IAEAFGVEDT SSTAKSDDSP
501: K
Arabidopsis Description
CPK4Calcium-dependent protein kinase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q38869]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.