Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH34989 | Soybean | endoplasmic reticulum | 95.41 | 95.58 |
| VIT_18s0072g00720.t01 | Wine grape | cytosol, plastid | 66.02 | 73.52 |
| Solyc12g056520.1.1 | Tomato | cytosol | 58.77 | 65.51 |
| Solyc04g071350.2.1 | Tomato | nucleus | 66.02 | 65.01 |
| CDY45948 | Canola | cytosol, nucleus, peroxisome | 28.47 | 64.32 |
| CDX68084 | Canola | nucleus | 62.99 | 63.52 |
| CDX85974 | Canola | nucleus | 62.72 | 63.12 |
| Bra003706.1-P | Field mustard | nucleus | 62.53 | 62.94 |
| AT1G76850.1 | Thale cress | nucleus | 62.81 | 62.75 |
| CDY13565 | Canola | nucleus | 60.51 | 62.46 |
| AT1G21170.2 | Thale cress | nucleus | 62.53 | 61.97 |
| GSMUA_Achr6P25360_001 | Banana | cytosol | 59.69 | 58.66 |
| TraesCS2D01G298000.2 | Wheat | nucleus | 56.01 | 56.9 |
| TraesCS2B01G316400.1 | Wheat | nucleus | 55.74 | 56.78 |
| TraesCS2A01G300100.3 | Wheat | nucleus | 56.01 | 56.69 |
| Os04t0421900-01 | Rice | plasma membrane | 57.21 | 56.58 |
| OQU81566 | Sorghum | nucleus | 56.66 | 56.19 |
| HORVU2Hr1G074320.5 | Barley | cytosol, plastid | 51.33 | 55.96 |
| Zm00001d036062_P001 | Maize | cytosol | 7.9 | 49.43 |
| Zm00001d039959_P001 | Maize | cytosol | 6.98 | 44.97 |
| PGSC0003DMT400027989 | Potato | nucleus | 8.26 | 43.48 |
| Bra008282.1-P | Field mustard | cytosol | 45.55 | 43.24 |
| CDY45950 | Canola | cytosol | 13.31 | 41.19 |
Protein Annotations
| EntrezGene:100794090 | MapMan:22.6.3.3 | EMBL:ACUP02012707 | InterPro:EXOC2/Sec5 | EnsemblPlantsGene:GLYMA_20G174900 | GO:GO:0000145 |
| GO:GO:0001927 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 |
| GO:GO:0006893 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | UniProt:I1NH98 | ProteinID:KRG91795.1 |
| ProteinID:KRG91796.1 | EnsemblPlants:KRG91797 | ProteinID:KRG91797 | ProteinID:KRG91797.1 | PFAM:PF15469 | PANTHER:PTHR13043 |
| UniParc:UPI000295A80A | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr20:-:41228644..41245563
Molecular Weight (calculated)
121941.0 Da
IEP (calculated)
5.421
GRAVY (calculated)
-0.470
Length
1089 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSSDSDEDEL LQMALKDQAQ RDVNYGKSSS NSRKPVANYV QQPKKPAPPP KQSLGKGRVA ADDDDSEIEM LSISSGDEDN VQYPVAASRN KGATAAAAGR
0101: PVREDDRTWD GEEPSRWKHV DEAELARRVR EMRETRSAPA PQKFVAPKFE KKGSAVGRKG LTYLQSFPRG MECVDPLGLG IIDNKTLRLI TESSHSSPKT
0201: DKDIQDGNLR EKFLYFSENF DAKMFLSRIH SNTSAADLEA GALALKTDFK SRTEQRKQLV KDNFDCFVSC KTTIDDIESK LRQIEDDPEG SGTSHLFNII
0301: QEVSLQANRA LKPLFERQAQ AEKIRTVQGM LQRFRTLFNL PSTIRGSISK GEYDLAVREY KKAKSIALPS HIQVGILKRV LEEVEKVMND FKTMLFKSME
0401: DPQIDLTNLE NTVRLLLDLE PESDPVWHYL NIQNQRIRGL LEKCTLDHAA RMENLHNELR ERALSDVRWR QIQEDMDESS DINNSPIGNT YPAVHSHPSN
0501: LPGKEVDGLR GRYIRRLTAV IIHYIPAFWK VALSVFSGKF AKSSQVPTDS NSNSSANKIE EKAGDGKYSS HSLDEVAAMI CSTISLYGVK VTNIFHDLEE
0601: SNVLRSYMSE AIEDISNACT ALELKEAAPP IAVAAIRTLQ SEIIRIYVLR LCSWMRASVE EVSKDVTWVI VSILERNKSP YGISCLPLTF RSVVASAMDQ
0701: INSMLWSLRN EATKSEDMFM QLQEIQESVR LAFLNCFLDF AGSLERIGFE LGQHRTDEEG SQLPNGYTHE LENAPSGLHG GVIDPHQQLL IVLSNIGYCK
0801: DELSYELYDK YRHIWQHSRG KDEGNSDVED LVNSFSALEG KVLEQYTFAK ANLIRSAAMN YLLHSGIQWG AAPAVKGVRD AAVELLHTLV AVHAEVFAGA
0901: KPLLDKTLGI LVEGLIDTFI SIFHENEATD LSAIDTNGFC QLMLELEYFE TILNPYFTSD ARDSLKSLQG LLLEKATESV TDAVDNPGHN RRPTRGSEDA
1001: LADDKQQGTT VSPDELISLA QQYSSEFLQS ELERTRINTA CFAESIPLDS LPEPAKSAYS PFRNSMDSPS RKHRGTYNTG ASSFSRHRH
0101: PVREDDRTWD GEEPSRWKHV DEAELARRVR EMRETRSAPA PQKFVAPKFE KKGSAVGRKG LTYLQSFPRG MECVDPLGLG IIDNKTLRLI TESSHSSPKT
0201: DKDIQDGNLR EKFLYFSENF DAKMFLSRIH SNTSAADLEA GALALKTDFK SRTEQRKQLV KDNFDCFVSC KTTIDDIESK LRQIEDDPEG SGTSHLFNII
0301: QEVSLQANRA LKPLFERQAQ AEKIRTVQGM LQRFRTLFNL PSTIRGSISK GEYDLAVREY KKAKSIALPS HIQVGILKRV LEEVEKVMND FKTMLFKSME
0401: DPQIDLTNLE NTVRLLLDLE PESDPVWHYL NIQNQRIRGL LEKCTLDHAA RMENLHNELR ERALSDVRWR QIQEDMDESS DINNSPIGNT YPAVHSHPSN
0501: LPGKEVDGLR GRYIRRLTAV IIHYIPAFWK VALSVFSGKF AKSSQVPTDS NSNSSANKIE EKAGDGKYSS HSLDEVAAMI CSTISLYGVK VTNIFHDLEE
0601: SNVLRSYMSE AIEDISNACT ALELKEAAPP IAVAAIRTLQ SEIIRIYVLR LCSWMRASVE EVSKDVTWVI VSILERNKSP YGISCLPLTF RSVVASAMDQ
0701: INSMLWSLRN EATKSEDMFM QLQEIQESVR LAFLNCFLDF AGSLERIGFE LGQHRTDEEG SQLPNGYTHE LENAPSGLHG GVIDPHQQLL IVLSNIGYCK
0801: DELSYELYDK YRHIWQHSRG KDEGNSDVED LVNSFSALEG KVLEQYTFAK ANLIRSAAMN YLLHSGIQWG AAPAVKGVRD AAVELLHTLV AVHAEVFAGA
0901: KPLLDKTLGI LVEGLIDTFI SIFHENEATD LSAIDTNGFC QLMLELEYFE TILNPYFTSD ARDSLKSLQG LLLEKATESV TDAVDNPGHN RRPTRGSEDA
1001: LADDKQQGTT VSPDELISLA QQYSSEFLQS ELERTRINTA CFAESIPLDS LPEPAKSAYS PFRNSMDSPS RKHRGTYNTG ASSFSRHRH
0001: MSSDSNDLDE DELLQMALKE QAKRDLTYQK PPSSSARKPV ANLVQQPRQQ KPVAAAAAPP KKSAAAVRKP SMDEDEESEV ELLSISSGDD DLEREREIGG
0101: SSGGAGRGRG SDVREKGRAR KEDDGAWDGG EPDCWKRVNE AELARRVRDM RESRTAPVVQ KVEGKAPAPG KKVALTSLQS LPRGMECIDP LKLGIIDNKT
0201: LRLITESSGS PSKAEKVDNT LREKLVYFSD HFDPKLFLSR IHQDTTAADL EAGALGLKSD LKGRNLQRKQ LVKDNFDCFV SCKTTIDDIE SKLKRIEEDP
0301: EGSGTTHLFN CMKSVTSRAN LAFEPLFERQ AQAEKIRSVQ GMLQRFRTLF NLPSIIRSSI SKGEYDLAVR EYKKAKSIAL PSHVNILKRV LEEVEKVMLE
0401: FKGTLYKSME DPKIDFTSLE NTVRLLLELE PESDPVWHYL NVQNHRIHGL LEKCTYDHEA RVEILRNDTH EKAISDAKWQ QIQQNGVSYS DTASSNENNA
0501: VQVDLQSVEF PSEEIDILKG RYIKRLTAVL VHHIPVFWKT AISIFSGKFA KSSQVTDTSA NKAEEKVTEA RYSTHSLEEV AGMIRKTISV YEAKVNSTFC
0601: DFDESCILRP FMSDAINEVS KACQAFEAKE STPHSAVVAL RKIQAEITKI YIQRLCSWMR ASTEGISKEE TWIPVSILER NRSPYAISYL PLAFRSVIVS
0701: GMEQVNLMIL SVKSEAAKSE DMFAQIEEII ISVRLAFLNC FLDFAAHLEQ IGADLSQSTS RQDNWKNGYS DEHQEEPSAN TYGSVIDPHR RLLMVLSNIG
0801: YCKDELASEL YNKFKYTWLQ SRDKNEDSSD LQDLIMSFSG LGEKVLEHYT FAKANLIRTA ATNYLLDSGI QWGSAPQVKG IRDAAVELLH TLVAVHAEVF
0901: AGAKPLLDKI LGVLIEGLID TFLSVVEENR SSDLRSIDAN GFCQLMFELE YFETVLYSYF TSAATESLKS LQGTVLEIAI ESISEAVETP GHNRRPTRGS
1001: EDTVSDDKQS VSADDLLALT KQCSNELLQQ ELERTRVNTA CFAESAPLES TPPLPKATYS SFRGSMDSPS RNYRGSQSSG SPINARPRRR
0101: SSGGAGRGRG SDVREKGRAR KEDDGAWDGG EPDCWKRVNE AELARRVRDM RESRTAPVVQ KVEGKAPAPG KKVALTSLQS LPRGMECIDP LKLGIIDNKT
0201: LRLITESSGS PSKAEKVDNT LREKLVYFSD HFDPKLFLSR IHQDTTAADL EAGALGLKSD LKGRNLQRKQ LVKDNFDCFV SCKTTIDDIE SKLKRIEEDP
0301: EGSGTTHLFN CMKSVTSRAN LAFEPLFERQ AQAEKIRSVQ GMLQRFRTLF NLPSIIRSSI SKGEYDLAVR EYKKAKSIAL PSHVNILKRV LEEVEKVMLE
0401: FKGTLYKSME DPKIDFTSLE NTVRLLLELE PESDPVWHYL NVQNHRIHGL LEKCTYDHEA RVEILRNDTH EKAISDAKWQ QIQQNGVSYS DTASSNENNA
0501: VQVDLQSVEF PSEEIDILKG RYIKRLTAVL VHHIPVFWKT AISIFSGKFA KSSQVTDTSA NKAEEKVTEA RYSTHSLEEV AGMIRKTISV YEAKVNSTFC
0601: DFDESCILRP FMSDAINEVS KACQAFEAKE STPHSAVVAL RKIQAEITKI YIQRLCSWMR ASTEGISKEE TWIPVSILER NRSPYAISYL PLAFRSVIVS
0701: GMEQVNLMIL SVKSEAAKSE DMFAQIEEII ISVRLAFLNC FLDFAAHLEQ IGADLSQSTS RQDNWKNGYS DEHQEEPSAN TYGSVIDPHR RLLMVLSNIG
0801: YCKDELASEL YNKFKYTWLQ SRDKNEDSSD LQDLIMSFSG LGEKVLEHYT FAKANLIRTA ATNYLLDSGI QWGSAPQVKG IRDAAVELLH TLVAVHAEVF
0901: AGAKPLLDKI LGVLIEGLID TFLSVVEENR SSDLRSIDAN GFCQLMFELE YFETVLYSYF TSAATESLKS LQGTVLEIAI ESISEAVETP GHNRRPTRGS
1001: EDTVSDDKQS VSADDLLALT KQCSNELLQQ ELERTRVNTA CFAESAPLES TPPLPKATYS SFRGSMDSPS RNYRGSQSSG SPINARPRRR
Arabidopsis Description
SEC5AExocyst complex component SEC5A [Source:UniProtKB/Swiss-Prot;Acc:Q8S3U9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.