Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003706.1-P | Field mustard | nucleus | 88.53 | 89.19 |
| CDX68084 | Canola | nucleus | 88.26 | 89.07 |
| CDX85974 | Canola | nucleus | 88.17 | 88.82 |
| CDY45948 | Canola | cytosol, nucleus, peroxisome | 38.9 | 87.97 |
| CDY13565 | Canola | nucleus | 84.22 | 87.01 |
| AT1G21170.2 | Thale cress | nucleus | 79.91 | 79.25 |
| VIT_18s0072g00720.t01 | Wine grape | cytosol, plastid | 60.92 | 67.89 |
| Solyc12g056520.1.1 | Tomato | cytosol | 56.79 | 63.36 |
| CDY45950 | Canola | cytosol | 20.46 | 63.35 |
| KRH34989 | Soybean | endoplasmic reticulum | 62.94 | 63.11 |
| KRG91797 | Soybean | cytosol | 62.75 | 62.81 |
| Solyc04g071350.2.1 | Tomato | nucleus | 62.75 | 61.84 |
| Bra008282.1-P | Field mustard | cytosol | 64.13 | 60.94 |
| GSMUA_Achr6P25360_001 | Banana | cytosol | 57.34 | 56.41 |
| TraesCS2D01G298000.2 | Wheat | nucleus | 55.41 | 56.34 |
| TraesCS2B01G316400.1 | Wheat | nucleus | 55.05 | 56.13 |
| TraesCS2A01G300100.3 | Wheat | nucleus | 55.32 | 56.04 |
| Os04t0421900-01 | Rice | plasma membrane | 56.61 | 56.04 |
| HORVU2Hr1G074320.5 | Barley | cytosol, plastid | 51.1 | 55.76 |
| OQU81566 | Sorghum | nucleus | 55.78 | 55.37 |
| PGSC0003DMT400027989 | Potato | nucleus | 8.99 | 47.34 |
| Zm00001d036062_P001 | Maize | cytosol | 7.43 | 46.55 |
| Zm00001d039959_P001 | Maize | cytosol | 6.97 | 44.97 |
Protein Annotations
| MapMan:22.6.3.3 | EntrezGene:844020 | ProteinID:AAG51148.1 | ProteinID:AEE35895.1 | EMBL:AF479278 | EMBL:AK118540 |
| EMBL:AK230372 | ArrayExpress:AT1G76850 | EnsemblPlantsGene:AT1G76850 | RefSeq:AT1G76850 | TAIR:AT1G76850 | RefSeq:AT1G76850-TAIR-G |
| EnsemblPlants:AT1G76850.1 | TAIR:AT1G76850.1 | Unigene:At.26946 | EMBL:BT005978 | InterPro:Cullin_repeat-like_dom_sf | InterPro:EXOC2/Sec5 |
| GO:GO:0000003 | GO:GO:0000145 | GO:GO:0001927 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005615 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0006887 | GO:GO:0006893 | GO:GO:0007154 |
| GO:GO:0008150 | GO:GO:0009506 | GO:GO:0009856 | GO:GO:0009875 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016043 | GO:GO:0060321 | GO:GO:0070062 | RefSeq:NP_177811.2 | PFAM:PF15469 | PO:PO:0000005 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR13043 | UniProt:Q8S3U9 | Symbol:SEC5A | SUPFAM:SSF74788 | UniParc:UPI0000004200 | SEG:seg |
Description
SEC5AExocyst complex component SEC5A [Source:UniProtKB/Swiss-Prot;Acc:Q8S3U9]
Coordinates
chr1:+:28847871..28854499
Molecular Weight (calculated)
121908.0 Da
IEP (calculated)
5.533
GRAVY (calculated)
-0.462
Length
1090 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSSDSNDLDE DELLQMALKE QAKRDLTYQK PPSSSARKPV ANLVQQPRQQ KPVAAAAAPP KKSAAAVRKP SMDEDEESEV ELLSISSGDD DLEREREIGG
0101: SSGGAGRGRG SDVREKGRAR KEDDGAWDGG EPDCWKRVNE AELARRVRDM RESRTAPVVQ KVEGKAPAPG KKVALTSLQS LPRGMECIDP LKLGIIDNKT
0201: LRLITESSGS PSKAEKVDNT LREKLVYFSD HFDPKLFLSR IHQDTTAADL EAGALGLKSD LKGRNLQRKQ LVKDNFDCFV SCKTTIDDIE SKLKRIEEDP
0301: EGSGTTHLFN CMKSVTSRAN LAFEPLFERQ AQAEKIRSVQ GMLQRFRTLF NLPSIIRSSI SKGEYDLAVR EYKKAKSIAL PSHVNILKRV LEEVEKVMLE
0401: FKGTLYKSME DPKIDFTSLE NTVRLLLELE PESDPVWHYL NVQNHRIHGL LEKCTYDHEA RVEILRNDTH EKAISDAKWQ QIQQNGVSYS DTASSNENNA
0501: VQVDLQSVEF PSEEIDILKG RYIKRLTAVL VHHIPVFWKT AISIFSGKFA KSSQVTDTSA NKAEEKVTEA RYSTHSLEEV AGMIRKTISV YEAKVNSTFC
0601: DFDESCILRP FMSDAINEVS KACQAFEAKE STPHSAVVAL RKIQAEITKI YIQRLCSWMR ASTEGISKEE TWIPVSILER NRSPYAISYL PLAFRSVIVS
0701: GMEQVNLMIL SVKSEAAKSE DMFAQIEEII ISVRLAFLNC FLDFAAHLEQ IGADLSQSTS RQDNWKNGYS DEHQEEPSAN TYGSVIDPHR RLLMVLSNIG
0801: YCKDELASEL YNKFKYTWLQ SRDKNEDSSD LQDLIMSFSG LGEKVLEHYT FAKANLIRTA ATNYLLDSGI QWGSAPQVKG IRDAAVELLH TLVAVHAEVF
0901: AGAKPLLDKI LGVLIEGLID TFLSVVEENR SSDLRSIDAN GFCQLMFELE YFETVLYSYF TSAATESLKS LQGTVLEIAI ESISEAVETP GHNRRPTRGS
1001: EDTVSDDKQS VSADDLLALT KQCSNELLQQ ELERTRVNTA CFAESAPLES TPPLPKATYS SFRGSMDSPS RNYRGSQSSG SPINARPRRR
0101: SSGGAGRGRG SDVREKGRAR KEDDGAWDGG EPDCWKRVNE AELARRVRDM RESRTAPVVQ KVEGKAPAPG KKVALTSLQS LPRGMECIDP LKLGIIDNKT
0201: LRLITESSGS PSKAEKVDNT LREKLVYFSD HFDPKLFLSR IHQDTTAADL EAGALGLKSD LKGRNLQRKQ LVKDNFDCFV SCKTTIDDIE SKLKRIEEDP
0301: EGSGTTHLFN CMKSVTSRAN LAFEPLFERQ AQAEKIRSVQ GMLQRFRTLF NLPSIIRSSI SKGEYDLAVR EYKKAKSIAL PSHVNILKRV LEEVEKVMLE
0401: FKGTLYKSME DPKIDFTSLE NTVRLLLELE PESDPVWHYL NVQNHRIHGL LEKCTYDHEA RVEILRNDTH EKAISDAKWQ QIQQNGVSYS DTASSNENNA
0501: VQVDLQSVEF PSEEIDILKG RYIKRLTAVL VHHIPVFWKT AISIFSGKFA KSSQVTDTSA NKAEEKVTEA RYSTHSLEEV AGMIRKTISV YEAKVNSTFC
0601: DFDESCILRP FMSDAINEVS KACQAFEAKE STPHSAVVAL RKIQAEITKI YIQRLCSWMR ASTEGISKEE TWIPVSILER NRSPYAISYL PLAFRSVIVS
0701: GMEQVNLMIL SVKSEAAKSE DMFAQIEEII ISVRLAFLNC FLDFAAHLEQ IGADLSQSTS RQDNWKNGYS DEHQEEPSAN TYGSVIDPHR RLLMVLSNIG
0801: YCKDELASEL YNKFKYTWLQ SRDKNEDSSD LQDLIMSFSG LGEKVLEHYT FAKANLIRTA ATNYLLDSGI QWGSAPQVKG IRDAAVELLH TLVAVHAEVF
0901: AGAKPLLDKI LGVLIEGLID TFLSVVEENR SSDLRSIDAN GFCQLMFELE YFETVLYSYF TSAATESLKS LQGTVLEIAI ESISEAVETP GHNRRPTRGS
1001: EDTVSDDKQS VSADDLLALT KQCSNELLQQ ELERTRVNTA CFAESAPLES TPPLPKATYS SFRGSMDSPS RNYRGSQSSG SPINARPRRR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.