Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45948 | Canola | cytosol, nucleus, peroxisome | 41.42 | 90.66 |
| CDX68084 | Canola | nucleus | 88.63 | 86.57 |
| CDX85974 | Canola | nucleus | 88.34 | 86.14 |
| AT1G76850.1 | Thale cress | nucleus | 87.01 | 84.22 |
| CDY45951 | Canola | extracellular | 11.56 | 76.73 |
| CDY45950 | Canola | cytosol | 22.37 | 67.05 |
| VIT_18s0072g00720.t01 | Wine grape | cytosol, plastid | 61.33 | 66.16 |
| Bra008282.1-P | Field mustard | cytosol | 71.0 | 65.3 |
| Solyc12g056520.1.1 | Tomato | cytosol | 57.35 | 61.92 |
| KRH34989 | Soybean | endoplasmic reticulum | 62.56 | 60.72 |
| KRG91797 | Soybean | cytosol | 62.46 | 60.51 |
| Solyc04g071350.2.1 | Tomato | nucleus | 63.22 | 60.31 |
| GSMUA_Achr6P25360_001 | Banana | cytosol | 58.01 | 55.23 |
| Os04t0421900-01 | Rice | plasma membrane | 57.44 | 55.04 |
| HORVU2Hr1G074320.5 | Barley | cytosol, plastid | 52.04 | 54.95 |
| TraesCS2D01G298000.2 | Wheat | nucleus | 55.64 | 54.76 |
| TraesCS2A01G300100.3 | Wheat | nucleus | 55.64 | 54.55 |
| TraesCS2B01G316400.1 | Wheat | nucleus | 55.26 | 54.54 |
| OQU81566 | Sorghum | nucleus | 56.3 | 54.1 |
| Zm00001d036062_P001 | Maize | cytosol | 7.96 | 48.28 |
| Zm00001d039959_P001 | Maize | cytosol | 7.11 | 44.38 |
| PGSC0003DMT400027989 | Potato | nucleus | 8.44 | 43.0 |
| CDY04603 | Canola | cytosol | 3.7 | 39.0 |
Protein Annotations
| EnsemblPlants:CDY13565 | EnsemblPlantsGene:GSBRNA2T00077933001 | GO:A0A078FGL6 | GO:GO:0000145 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006893 | GO:GO:0008150 | InterPro:EXOC2/Sec5 |
| PANTHER:PTHR13043 | PFAM:PF15469 | ProteinID:CDY13565 | ProteinID:CDY13565.1 | SEG:seg | UniParc:UPI0004EEC648 |
| UniProt:A0A078FGL6 | MapMan:22.6.3.3 | : | : | : | : |
Description
BnaC02g23760DBnaC02g23760D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FGL6]
Coordinates
chrLK032036:+:470317..476191
Molecular Weight (calculated)
118754.0 Da
IEP (calculated)
5.175
GRAVY (calculated)
-0.449
Length
1055 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSSDSDEDEL LQMALKEQAQ RDLTDQKPPS SSSSRPVANL VQQPRQHKPS PARKPSMDEP EVELLSISSE DDDVERERER GRAKKEDDGG GAWDGEEPDC
0101: WKRVNEAELA RRVRDMRESR TAPVVQKLED KAPEPGKKVV LTSLQSLPRG MECIDPLKLG IIDNKTLRLI SERSGSPSKA EKVDNTLREK LIYFSDHFDP
0201: KLFLSRIHQD TSAADLEAGA LGLKSDLKGR DLQRKQLVKD NFDCFVSCKT TIDDIESKLK RIEEDPEGSG TTHLFNCMKS VTSTANLAFE PLFERQAQAE
0301: KIRSVQGMLQ RFRTLFNLPS IIRNSISKGE YDLAVREYKK AKSIALPSHV NILKRVLEEV EKVMLEFKGT LYKTMEDPKI DFTSLENTVR LLLELEPESD
0401: PVWHYINVQN HRIHGLLEKC TYDHEARVET LRNETRERAI SDAKWQQIQQ NVVPYSDAAS STENNEVQVD LQSVEFPSEE IDGLKGRYIK IMTAVLVHHI
0501: PAFWKTALSV FSGKFAKLSQ VTDTSANKSE EKVTEARYST HSLEEVAGMI RKTISVYEAK VNNTFCDFDE SCILRPFMSN AIQAVSKACQ AFEAKDSVPH
0601: SSVVALRKVQ AEITKIYIQR LCSWMRASTE RISKEETWIP ASILERHKSP YAISYLPLAF RSVIVSGMEQ INLMILSVKG EEAAKSEDMF AQIEEMLISV
0701: RLAFLNCFLD FAAHLEQIGA DLSTREDWKN GYSDDQEGVT SASTYASVVD PHRRLLMVLS NIGYCKDELA SELYNKFKYI WLQSRGKDED SSSDLQDLIM
0801: SFSGLGEKVL EHYTFAKANL IRTAATIYLL DSGIQWGSAP QVKGIRDSAV ELLHTLVAVH AEVFAGARPL LEKILGFLIE GLIDTFLSLV EENRTDELRS
0901: IDANGFCQVM FELEYFETVL NLYFTSDATA SLKTLQGTVL EIAIESVSES VETTPGHNRR PTRGSEDTAS DDRQGSSVSA DDLLALTKQY SSELLQTEME
1001: RTSVNTACFA ESVPVEPIPP LLPKASYRGP MDPPSRNYRG SQSSGSPIHA RPRRR
0101: WKRVNEAELA RRVRDMRESR TAPVVQKLED KAPEPGKKVV LTSLQSLPRG MECIDPLKLG IIDNKTLRLI SERSGSPSKA EKVDNTLREK LIYFSDHFDP
0201: KLFLSRIHQD TSAADLEAGA LGLKSDLKGR DLQRKQLVKD NFDCFVSCKT TIDDIESKLK RIEEDPEGSG TTHLFNCMKS VTSTANLAFE PLFERQAQAE
0301: KIRSVQGMLQ RFRTLFNLPS IIRNSISKGE YDLAVREYKK AKSIALPSHV NILKRVLEEV EKVMLEFKGT LYKTMEDPKI DFTSLENTVR LLLELEPESD
0401: PVWHYINVQN HRIHGLLEKC TYDHEARVET LRNETRERAI SDAKWQQIQQ NVVPYSDAAS STENNEVQVD LQSVEFPSEE IDGLKGRYIK IMTAVLVHHI
0501: PAFWKTALSV FSGKFAKLSQ VTDTSANKSE EKVTEARYST HSLEEVAGMI RKTISVYEAK VNNTFCDFDE SCILRPFMSN AIQAVSKACQ AFEAKDSVPH
0601: SSVVALRKVQ AEITKIYIQR LCSWMRASTE RISKEETWIP ASILERHKSP YAISYLPLAF RSVIVSGMEQ INLMILSVKG EEAAKSEDMF AQIEEMLISV
0701: RLAFLNCFLD FAAHLEQIGA DLSTREDWKN GYSDDQEGVT SASTYASVVD PHRRLLMVLS NIGYCKDELA SELYNKFKYI WLQSRGKDED SSSDLQDLIM
0801: SFSGLGEKVL EHYTFAKANL IRTAATIYLL DSGIQWGSAP QVKGIRDSAV ELLHTLVAVH AEVFAGARPL LEKILGFLIE GLIDTFLSLV EENRTDELRS
0901: IDANGFCQVM FELEYFETVL NLYFTSDATA SLKTLQGTVL EIAIESVSES VETTPGHNRR PTRGSEDTAS DDRQGSSVSA DDLLALTKQY SSELLQTEME
1001: RTSVNTACFA ESVPVEPIPP LLPKASYRGP MDPPSRNYRG SQSSGSPIHA RPRRR
0001: MSSDSNDLDE DELLQMALKE QAKRDLTYQK PPSSSARKPV ANLVQQPRQQ KPVAAAAAPP KKSAAAVRKP SMDEDEESEV ELLSISSGDD DLEREREIGG
0101: SSGGAGRGRG SDVREKGRAR KEDDGAWDGG EPDCWKRVNE AELARRVRDM RESRTAPVVQ KVEGKAPAPG KKVALTSLQS LPRGMECIDP LKLGIIDNKT
0201: LRLITESSGS PSKAEKVDNT LREKLVYFSD HFDPKLFLSR IHQDTTAADL EAGALGLKSD LKGRNLQRKQ LVKDNFDCFV SCKTTIDDIE SKLKRIEEDP
0301: EGSGTTHLFN CMKSVTSRAN LAFEPLFERQ AQAEKIRSVQ GMLQRFRTLF NLPSIIRSSI SKGEYDLAVR EYKKAKSIAL PSHVNILKRV LEEVEKVMLE
0401: FKGTLYKSME DPKIDFTSLE NTVRLLLELE PESDPVWHYL NVQNHRIHGL LEKCTYDHEA RVEILRNDTH EKAISDAKWQ QIQQNGVSYS DTASSNENNA
0501: VQVDLQSVEF PSEEIDILKG RYIKRLTAVL VHHIPVFWKT AISIFSGKFA KSSQVTDTSA NKAEEKVTEA RYSTHSLEEV AGMIRKTISV YEAKVNSTFC
0601: DFDESCILRP FMSDAINEVS KACQAFEAKE STPHSAVVAL RKIQAEITKI YIQRLCSWMR ASTEGISKEE TWIPVSILER NRSPYAISYL PLAFRSVIVS
0701: GMEQVNLMIL SVKSEAAKSE DMFAQIEEII ISVRLAFLNC FLDFAAHLEQ IGADLSQSTS RQDNWKNGYS DEHQEEPSAN TYGSVIDPHR RLLMVLSNIG
0801: YCKDELASEL YNKFKYTWLQ SRDKNEDSSD LQDLIMSFSG LGEKVLEHYT FAKANLIRTA ATNYLLDSGI QWGSAPQVKG IRDAAVELLH TLVAVHAEVF
0901: AGAKPLLDKI LGVLIEGLID TFLSVVEENR SSDLRSIDAN GFCQLMFELE YFETVLYSYF TSAATESLKS LQGTVLEIAI ESISEAVETP GHNRRPTRGS
1001: EDTVSDDKQS VSADDLLALT KQCSNELLQQ ELERTRVNTA CFAESAPLES TPPLPKATYS SFRGSMDSPS RNYRGSQSSG SPINARPRRR
0101: SSGGAGRGRG SDVREKGRAR KEDDGAWDGG EPDCWKRVNE AELARRVRDM RESRTAPVVQ KVEGKAPAPG KKVALTSLQS LPRGMECIDP LKLGIIDNKT
0201: LRLITESSGS PSKAEKVDNT LREKLVYFSD HFDPKLFLSR IHQDTTAADL EAGALGLKSD LKGRNLQRKQ LVKDNFDCFV SCKTTIDDIE SKLKRIEEDP
0301: EGSGTTHLFN CMKSVTSRAN LAFEPLFERQ AQAEKIRSVQ GMLQRFRTLF NLPSIIRSSI SKGEYDLAVR EYKKAKSIAL PSHVNILKRV LEEVEKVMLE
0401: FKGTLYKSME DPKIDFTSLE NTVRLLLELE PESDPVWHYL NVQNHRIHGL LEKCTYDHEA RVEILRNDTH EKAISDAKWQ QIQQNGVSYS DTASSNENNA
0501: VQVDLQSVEF PSEEIDILKG RYIKRLTAVL VHHIPVFWKT AISIFSGKFA KSSQVTDTSA NKAEEKVTEA RYSTHSLEEV AGMIRKTISV YEAKVNSTFC
0601: DFDESCILRP FMSDAINEVS KACQAFEAKE STPHSAVVAL RKIQAEITKI YIQRLCSWMR ASTEGISKEE TWIPVSILER NRSPYAISYL PLAFRSVIVS
0701: GMEQVNLMIL SVKSEAAKSE DMFAQIEEII ISVRLAFLNC FLDFAAHLEQ IGADLSQSTS RQDNWKNGYS DEHQEEPSAN TYGSVIDPHR RLLMVLSNIG
0801: YCKDELASEL YNKFKYTWLQ SRDKNEDSSD LQDLIMSFSG LGEKVLEHYT FAKANLIRTA ATNYLLDSGI QWGSAPQVKG IRDAAVELLH TLVAVHAEVF
0901: AGAKPLLDKI LGVLIEGLID TFLSVVEENR SSDLRSIDAN GFCQLMFELE YFETVLYSYF TSAATESLKS LQGTVLEIAI ESISEAVETP GHNRRPTRGS
1001: EDTVSDDKQS VSADDLLALT KQCSNELLQQ ELERTRVNTA CFAESAPLES TPPLPKATYS SFRGSMDSPS RNYRGSQSSG SPINARPRRR
Arabidopsis Description
SEC5AExocyst complex component SEC5A [Source:UniProtKB/Swiss-Prot;Acc:Q8S3U9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.