Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G02350.1 | CDY20653 | AT1G10180.1 | 23495664 |
| AT4G02350.1 | CDY31043 | AT1G10180.1 | 23495664 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY65634 | Canola | cytosol | 94.65 | 94.53 |
| AT4G02350.1 | Thale cress | cytosol | 85.53 | 83.35 |
| VIT_07s0005g00680.t01 | Wine grape | cytosol | 74.71 | 71.45 |
| KRH68203 | Soybean | endoplasmic reticulum | 72.62 | 69.8 |
| KRH14016 | Soybean | mitochondrion | 72.75 | 68.3 |
| Solyc09g075280.1.1 | Tomato | nucleus | 71.45 | 68.16 |
| GSMUA_Achr3P24060_001 | Banana | cytosol | 58.8 | 58.72 |
| Zm00001d040788_P001 | Maize | cytosol, mitochondrion, plastid | 58.15 | 55.06 |
| EES02923 | Sorghum | cytosol, mitochondrion | 58.15 | 55.06 |
| Os01t0351300-01 | Rice | plasma membrane | 57.37 | 55.0 |
| Zm00001d009226_P001 | Maize | mitochondrion | 57.89 | 54.81 |
| TraesCS3B01G232000.1 | Wheat | cytosol | 57.37 | 54.59 |
| TraesCS3A01G199000.2 | Wheat | cytosol | 57.11 | 54.34 |
| GSMUA_Achr8P06600_001 | Banana | cytosol | 54.24 | 53.27 |
| HORVU0Hr1G006630.1 | Barley | cytosol | 57.63 | 52.18 |
| TraesCS3D01G205600.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane, plastid | 57.11 | 50.34 |
| CDY56776 | Canola | cytosol | 44.46 | 45.59 |
| CDX72119 | Canola | cytosol | 44.46 | 45.59 |
| CDY61690 | Canola | cytosol | 3.65 | 37.33 |
| CDY05466 | Canola | cytosol | 3.65 | 37.33 |
Protein Annotations
| Gene3D:1.10.357.30 | Gene3D:1.20.58.670 | MapMan:22.6.3.7 | GO:A0A078IKE9 | UniProt:A0A078IKE9 | EnsemblPlants:CDY50392 |
| ProteinID:CDY50392 | ProteinID:CDY50392.1 | ncoils:Coil | InterPro:EXOC6/Sec15 | GO:GO:0000145 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006887 | GO:GO:0006904 |
| GO:GO:0008150 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00096614001 | PFAM:PF04091 | PIRSF:PIRSF025007 | PANTHER:PTHR12702 |
| PANTHER:PTHR12702:SF1 | UniParc:UPI0004EEEA0A | : | : | : | : |
Description
BnaCnng19240DExocyst complex component [Source:UniProtKB/TrEMBL;Acc:A0A078IKE9]
Coordinates
chrLK032905:-:86973..89510
Molecular Weight (calculated)
86450.9 Da
IEP (calculated)
6.075
GRAVY (calculated)
-0.219
Length
767 amino acids
Sequence
(BLAST)
(BLAST)
001: MQSPKPRRKA GPTTNGLDSA EKLDELLISS AICNGEDLGP FVRKTFGTGK PETLLHHLKL FSRSKESEIE EVCKAHYQDF IHAVDDLKSL LSDVESLKSA
101: LSDSNSKLQS VAAPLLSSLD SLVEAGTVSN NVDLAIGAVK HCVRVAEIAS RANRHLQGGS FYMALKCVEL IESELLEKTP SSTLKRMIEK RIPEIRGYVK
201: RRVSKELGDW LVEIRVVCRN LGQLAIGEAS SSRQREEEVR IKQKEAECVY ALNEEDIDGD EYESSDDDAF DLTPLYRAYH IHQTLSLEDS FKQYYFDNRE
301: LQLKSDSQIA GFFIVEDRVL RTGGGLISKM EVEFLWDLAV TNMCAVLEDQ FSRMQTANHL LLIKDYVSLL GVSLRRYGYT VDPLLEVLSK HRDKYHELLL
401: SDCRTQMAEA LSADKFEQML MKKEYEYSMN VLSFQLQTSE IAPAFPYIAP FSTAVPDCCR IVRSFVEDSV SFMSHGGQLD FYDVVKKYLD RLLGEVLDEA
501: LLKLISSSVH VVSQAMQVAA NMAVFERACD FFFRHAAQLS GVPLRMAERG RRHFPLTKSQ NAAEETLSGL LKKKIDGFMI LVENVNWTSD DVPQGGNEYM
601: NEVIIYLETL VSTAQQILPA KVLKRVLRDV IAHISERIFG TLCGDLVKRL SMAAIKGLDM DVQLLDSFTE QLTSLLTEKE ANEMKTAFVG IRQMINLLLS
701: SHPEKFLNPV IRERSYHALD NRKVATVSEK LRDPSDSIFG TFGARGSRQN PKNKSLDTLI KRLRDVS
101: LSDSNSKLQS VAAPLLSSLD SLVEAGTVSN NVDLAIGAVK HCVRVAEIAS RANRHLQGGS FYMALKCVEL IESELLEKTP SSTLKRMIEK RIPEIRGYVK
201: RRVSKELGDW LVEIRVVCRN LGQLAIGEAS SSRQREEEVR IKQKEAECVY ALNEEDIDGD EYESSDDDAF DLTPLYRAYH IHQTLSLEDS FKQYYFDNRE
301: LQLKSDSQIA GFFIVEDRVL RTGGGLISKM EVEFLWDLAV TNMCAVLEDQ FSRMQTANHL LLIKDYVSLL GVSLRRYGYT VDPLLEVLSK HRDKYHELLL
401: SDCRTQMAEA LSADKFEQML MKKEYEYSMN VLSFQLQTSE IAPAFPYIAP FSTAVPDCCR IVRSFVEDSV SFMSHGGQLD FYDVVKKYLD RLLGEVLDEA
501: LLKLISSSVH VVSQAMQVAA NMAVFERACD FFFRHAAQLS GVPLRMAERG RRHFPLTKSQ NAAEETLSGL LKKKIDGFMI LVENVNWTSD DVPQGGNEYM
601: NEVIIYLETL VSTAQQILPA KVLKRVLRDV IAHISERIFG TLCGDLVKRL SMAAIKGLDM DVQLLDSFTE QLTSLLTEKE ANEMKTAFVG IRQMINLLLS
701: SHPEKFLNPV IRERSYHALD NRKVATVSEK LRDPSDSIFG TFGARGSRQN PKNKSLDTLI KRLRDVS
001: MQSSKGRRKV GSTTAGAGID SAEKLDELLI SSAICNGEDL GPFVRKTFGT GKPETLLHHL KFFARSKESE IEEVCKAHYQ DFIHAVDDLK SLLSDVESLK
101: SALSDSNSKL QSVAAPLLSS LDSLVEAQTV SKNVDLAIGA VTHCVRVMEL VSRANQHLQS GNFYMALKCV DSIESDFMEK TPSSTLKRML ENRIPAIRSY
201: VERKVNKEFG DWLVEIRVVS RNLGQLAIGE ASAARQREEE LRIKQRQAEE QSRLSLRDCV YALNEEEDDE FGSGHEGSDG GSSGGGLLGF DLTPLYRAYH
301: IHQTLSLGDT FKQYYYNNRD LQLTSDFQIA GFFIVEDRVL RTGGGLISKL EVETLWDTAV TKMCAVLEDQ FSRMQTANHL LLIKDYVSLL GVSLRRYGYA
401: VDSLLEVLSK HRDKYHELLL SDCRKQITEA LSADKFEQML MKKEYEYSMN VLSFQLQTSE IVPAFPFIAP FSTTVPDCCR IVRSFIEDSV SFMSHGGQLD
501: FYDVVKKYLD RLLGEVLDEA LLKLISTSVH GVSQAMQVAA NMAVFERACD FFFRHAAHLS GVPLRMAERG RRHFPLTKSQ NTAEDTLSGM LKKKIDGFMT
601: LLENVNWTSD DIPQGGNEYM NEVLIYLETL VSTAQQILPA KVLKRVLRDV LAHISEKIVG TLCGDLVKRL SMAAIKGLDV DIQLLDSFTE NLTPLLTDKE
701: AREMKKAFVE IRQMINLLLS SHPENFVNPV IRERSYNALD YRKVATVSEK FRDPSDSIFG TFGTRGSRQN PKNKSLDALI KRLKDVS
101: SALSDSNSKL QSVAAPLLSS LDSLVEAQTV SKNVDLAIGA VTHCVRVMEL VSRANQHLQS GNFYMALKCV DSIESDFMEK TPSSTLKRML ENRIPAIRSY
201: VERKVNKEFG DWLVEIRVVS RNLGQLAIGE ASAARQREEE LRIKQRQAEE QSRLSLRDCV YALNEEEDDE FGSGHEGSDG GSSGGGLLGF DLTPLYRAYH
301: IHQTLSLGDT FKQYYYNNRD LQLTSDFQIA GFFIVEDRVL RTGGGLISKL EVETLWDTAV TKMCAVLEDQ FSRMQTANHL LLIKDYVSLL GVSLRRYGYA
401: VDSLLEVLSK HRDKYHELLL SDCRKQITEA LSADKFEQML MKKEYEYSMN VLSFQLQTSE IVPAFPFIAP FSTTVPDCCR IVRSFIEDSV SFMSHGGQLD
501: FYDVVKKYLD RLLGEVLDEA LLKLISTSVH GVSQAMQVAA NMAVFERACD FFFRHAAHLS GVPLRMAERG RRHFPLTKSQ NTAEDTLSGM LKKKIDGFMT
601: LLENVNWTSD DIPQGGNEYM NEVLIYLETL VSTAQQILPA KVLKRVLRDV LAHISEKIVG TLCGDLVKRL SMAAIKGLDV DIQLLDSFTE NLTPLLTDKE
701: AREMKKAFVE IRQMINLLLS SHPENFVNPV IRERSYNALD YRKVATVSEK FRDPSDSIFG TFGTRGSRQN PKNKSLDALI KRLKDVS
Arabidopsis Description
SEC15BExocyst complex component SEC15B [Source:UniProtKB/Swiss-Prot;Acc:F4JHH5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.