Factsheet for Os01t0351300-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

plasma membrane: 18260611
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 18260611 doi

SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic

Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au

PPI

Inferred distinct locusB in Crop

locusB	locations
Os07t0568000-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G02350.1	Os07t0568000-01	AT1G10180.1	23495664

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES02923	Sorghum	cytosol, mitochondrion	94.25	93.09
Zm00001d040788_P001	Maize	cytosol, mitochondrion, plastid	93.75	92.59
Zm00001d009226_P001	Maize	mitochondrion	93.62	92.47
TraesCS3B01G232000.1	Wheat	cytosol	91.0	90.32
TraesCS3A01G199000.2	Wheat	cytosol	90.88	90.2
HORVU0Hr1G006630.1	Barley	cytosol	91.12	86.07
TraesCS3D01G205600.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane, plastid	90.75	83.45
GSMUA_Achr3P24060_001	Banana	cytosol	63.88	66.54
VIT_07s0005g00680.t01	Wine grape	cytosol	60.75	60.6
Solyc09g075280.1.1	Tomato	nucleus	60.62	60.32
GSMUA_Achr8P06600_001	Banana	cytosol	58.75	60.18
Bra018558.1-P	Field mustard	cytosol	59.12	59.42
KRH68203	Soybean	endoplasmic reticulum	59.25	59.4
Bra036274.1-P	Field mustard	cytosol	57.25	58.34
KRH14016	Soybean	mitochondrion	59.25	58.02
CDY65634	Canola	cytosol	55.25	57.55
AT4G02350.1	Thale cress	cytosol	56.5	57.43
CDY50392	Canola	cytosol	55.0	57.37
Os10t0415200-02	Rice	cytosol	42.25	42.84
Os03t0163500-01	Rice	cytosol, plasma membrane	41.25	41.88

Protein Annotations

Gene3D:1.10.357.30	Gene3D:1.20.58.670	MapMan:22.6.3.7	EntrezGene:4326480	ProteinID:BAB89615.1	ProteinID:BAB93424.1
ProteinID:BAF04899.1	ProteinID:BAS72035.1	ncoils:Coil	InterPro:EXOC6/Sec15	GO:GO:0000003	GO:GO:0000145
GO:GO:0003674	GO:GO:0003824	GO:GO:0003950	GO:GO:0005575	GO:GO:0005576	GO:GO:0005615
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0005886	GO:GO:0006464
GO:GO:0006471	GO:GO:0006810	GO:GO:0006887	GO:GO:0006904	GO:GO:0007154	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009506	GO:GO:0009653	GO:GO:0009846	GO:GO:0009856
GO:GO:0009860	GO:GO:0009875	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0016049
GO:GO:0016740	GO:GO:0016757	GO:GO:0019538	GO:GO:0030154	GO:GO:0040007	GO:GO:0060321
GO:GO:0070062	EnsemblPlantsGene:Os01g0351300	EnsemblPlants:Os01t0351300-01	PFAM:PF04091	PIRSF:PIRSF025007	PANTHER:PTHR12702
PANTHER:PTHR12702:SF1	UniProt:Q8S213	UniParc:UPI000009CC3D	RefSeq:XP_015621102.1	SEG:seg	:

Description

Exocyst complex subunit Sec15-like family protein. (Os01t0351300-01)

Coordinates

chr1:+:14059603..14064199

Molecular Weight (calculated)

87661.0 Da

IEP (calculated)

6.608

GRAVY (calculated)

-0.061

Length

800 amino acids

Sequence
(BLAST)

001: MLRRQPGDAP ASAAASEADL AQLSTAIAAG EDLGPFVRRA FACGRPEPLL ASLRAAARDR EAEIEELCRA HFHDFIRAVD DLRSLLADAD ALKGSLSASH
101: AALLSSAAPL LASLESFLAA RGLAGNLSSA LASSRRCVRL LALANRANAH LQGGNHNLYL ALRAVDAIDR DLASGPEPLP LPTLRRMLLS LVPAVRAHAE
201: REISREFSDW MVSIRAASRH LGQVAIGRSA AARQRQEELR SKHRPLEECI TLDDDGVGDL DDFAAAAATA DVADGAAAAS FDLTPLYRAM HIHHTLALGE
301: RFKKYYLENR KLQLTSDFDV IAATPFLESH QVFFSQIAGF FIVEDRVFRT GGGLTSRPDV DALWDSAVAK MVSVMEDNFS RMQTANHLLL ITDYAALLSA
401: TMRRYGYPVG MLLDVLARHR DKYHDLLLAD CRRQVVEALA ADKFDQMLMR KEYEYSMNVL AFGIQSSDIT PAFPYVAPFS CTVPDICRIV RSFIEDSVSF
501: MAHGGGGDTY AAVKKYLGRI LSEVVDASIQ KLVDSGGGLS VSQAMQVAAN MSVMERACEF FTGHAAQLCG VPLRAVERGR RDFPLRKSRD AAEALLLRLL
601: RSKVDEFMGQ SDGVTWMADD PPAGGNEYAN EVIIYLETLT STAQQILPLP VLRRVLVAVL AHISERIVGL FLNDSVKRFN ASAVTGIDTD LKMFEAFGES
701: MSSLFVDSDQ ESAANEMKAA LVEARQLVNL LMSNSPENFL NPVIREKSYN KLDYKKVAAI SEKFRDSSES YFSTFGTRGA RQNPKKKSLD TLIKRLREAS

Best Arabidopsis Sequence Match ( AT4G02350.2 )
(BLAST)

001: MQSSKGRRKV GSTTAGAGID SAEKLDELLI SSAICNGEDL GPFVRKTFGT GKPETLLHHL KFFARSKESE IEEVCKAHYQ DFIHAVDDLK SLLSDVESLK
101: SALSDSNSKL QSVAAPLLSS LDSLVEAQTV SKNVDLAIGA VTHCVRVMEL VSRANQHLQS GNFYMALKCV DSIESDFMEK TPSSTLKRML ENRIPAIRSY
201: VERKVNKEFG DWLVEIRVVS RNLGQLAIGE ASAARQREEE LRIKQRQAEE QSRLSLRDCV YALNEEEDDE FGSGHEGSDG GSSGGGLLGF DLTPLYRAYH
301: IHQTLSLGDT FKQYYYNNRD LQLTSDFQIA GFFIVEDRVL RTGGGLISKL EVETLWDTAV TKMCAVLEDQ FSRMQTANHL LLIKDYVSLL GVSLRRYGYA
401: VDSLLEVLSK HRDKYHELLL SDCRKQITEA LSADKFEQML MKKEYEYSMN VLSFQLQTSE IVPAFPFIAP FSTTVPDCCR IVRSFIEDSV SFMSHGGQLD
501: FYDVVKKYLD RLLGEVLDEA LLKLISTSVH GVSQAMQVAA NMAVFERACD FFFRHAAHLS GVPLRMAERG RRHFPLTKSQ NTAEDTLSGM LKKKIDGFMT
601: LLENVNWTSD DIPQGGNEYM NEVLIYLETL VSTAQQILPA KVLKRVLRDV LAHISEKIVG TLCGDLVKRL SMAAIKGLDV DIQLLDSFTE NLTPLLTDKE
701: AREMKKAFVE IRQMINLLLS SHPENFVNPV IRERSYNALD YRKVATVSEK FRDPSDSIFG TFGTRGSRQN PKNKSLDALI KRLKDVS

Arabidopsis Description

SEC15BExocyst complex component SEC15B [Source:UniProtKB/Swiss-Prot;Acc:F4JHH5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.