Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra018457.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G02350.1 | Bra018457.1-P | AT1G10180.1 | 23495664 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY65634 | Canola | cytosol | 96.43 | 98.57 |
| Bra018558.1-P | Field mustard | cytosol | 89.43 | 88.19 |
| AT4G02350.1 | Thale cress | cytosol | 84.2 | 83.99 |
| VIT_07s0005g00680.t01 | Wine grape | cytosol | 75.41 | 73.82 |
| KRH68203 | Soybean | endoplasmic reticulum | 73.12 | 71.93 |
| KRH14016 | Soybean | mitochondrion | 73.76 | 70.87 |
| Solyc09g075280.1.1 | Tomato | nucleus | 72.48 | 70.77 |
| GSMUA_Achr3P24060_001 | Banana | cytosol | 59.87 | 61.2 |
| Os01t0351300-01 | Rice | plasma membrane | 58.34 | 57.25 |
| TraesCS3B01G232000.1 | Wheat | cytosol | 58.73 | 57.2 |
| EES02923 | Sorghum | cytosol, mitochondrion | 58.98 | 57.16 |
| Zm00001d040788_P001 | Maize | cytosol, mitochondrion, plastid | 58.85 | 57.04 |
| TraesCS3A01G199000.2 | Wheat | cytosol | 58.47 | 56.95 |
| Zm00001d009226_P001 | Maize | mitochondrion | 58.73 | 56.91 |
| GSMUA_Achr8P06600_001 | Banana | cytosol | 55.8 | 56.08 |
| HORVU0Hr1G006630.1 | Barley | cytosol | 59.11 | 54.78 |
| TraesCS3D01G205600.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane, plastid | 58.47 | 52.76 |
| Bra007260.1-P | Field mustard | cytosol | 44.97 | 47.19 |
Protein Annotations
| Gene3D:1.10.357.30 | Gene3D:1.20.58.670 | MapMan:22.6.3.7 | EnsemblPlantsGene:Bra036274 | EnsemblPlants:Bra036274.1 | EnsemblPlants:Bra036274.1-P |
| InterPro:EXOC6/Sec15 | GO:GO:0000145 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006810 | GO:GO:0006887 | GO:GO:0006904 | GO:GO:0008150 | GO:GO:0009987 | UniProt:M4F5B8 |
| PFAM:PF04091 | PIRSF:PIRSF025007 | PANTHER:PTHR12702 | PANTHER:PTHR12702:SF1 | UniParc:UPI0002541F92 | SEG:seg |
Description
AT3G56640 (E=3e-208) | exocyst complex subunit Sec15-like family protein
Coordinates
chrA09:-:235174..237531
Molecular Weight (calculated)
88647.6 Da
IEP (calculated)
6.142
GRAVY (calculated)
-0.226
Length
785 amino acids
Sequence
(BLAST)
(BLAST)
001: MQSPKPRRKA GPTTNGLDSA EKLDELLISS AICNGEDLGP FVRKTFGTGK PETLLHHLKL FSRSKESEIE EVCKAHYQDF IHAVDDLKSL LSDVESLKSA
101: LSDSNSKLQS VAAPLLSSLD SLVEAGTVSK NVDLAIGAVK HCVRVAEIAS RANRHLQGGR FYMALKCVEL IESELLEKTP SSTLKRMIEK RIPEIRGYVK
201: RRVSKELGDW LVEIRVVCRN LGQLAIGEAS SSRQREEEVR IKQKEAECVY TLNEEDIDGD EYESSDDDDA FDLTPLYRAY HIHQTLSLED GFKQYYFDNR
301: ELQLKSDSQV SSMTPFLESH QTFFAQIAGF FIVEDRVLRT GGGLISKVEV EFLWDLAVTN MCAVLEDQFS RMQTANHLLL IKDYVSLLGV SLRRYGYTVD
401: PLLEVLSKHR DKYHELLLSD CRKQMAEALS ADKFEQMLMK KEYEYSMNVL SFQLQTSDIV PAFPYIAPFS TTVPDCCRIV RSFIEDSVSF MSHGGQLDFY
501: DVVKKYLDRL LGEVLDEALL KLISSSVHVV SQAMQVAANM AVFERACDFF FRHAAQLSGV PLRMAERGRR HFPLTKSQNA AEETLSGLLK KKIDGFMILV
601: ENVNWTSDDV PQGGNEYMNE VIIYLETLVS TAQQILPAKV LRRVLRDVLA HISERIVGTL CGDLVKRLSM AAIKGLDVDI QLLDSFTEQL TSLLTEKEAN
701: EMKTAFVEIR QMINLLLSSH PEKFLNPVIR ERSYHALDNR KVATVSEKLR DPSDSIFGTF GARGSRQNPK NKSLDTLIKR LKDVS
101: LSDSNSKLQS VAAPLLSSLD SLVEAGTVSK NVDLAIGAVK HCVRVAEIAS RANRHLQGGR FYMALKCVEL IESELLEKTP SSTLKRMIEK RIPEIRGYVK
201: RRVSKELGDW LVEIRVVCRN LGQLAIGEAS SSRQREEEVR IKQKEAECVY TLNEEDIDGD EYESSDDDDA FDLTPLYRAY HIHQTLSLED GFKQYYFDNR
301: ELQLKSDSQV SSMTPFLESH QTFFAQIAGF FIVEDRVLRT GGGLISKVEV EFLWDLAVTN MCAVLEDQFS RMQTANHLLL IKDYVSLLGV SLRRYGYTVD
401: PLLEVLSKHR DKYHELLLSD CRKQMAEALS ADKFEQMLMK KEYEYSMNVL SFQLQTSDIV PAFPYIAPFS TTVPDCCRIV RSFIEDSVSF MSHGGQLDFY
501: DVVKKYLDRL LGEVLDEALL KLISSSVHVV SQAMQVAANM AVFERACDFF FRHAAQLSGV PLRMAERGRR HFPLTKSQNA AEETLSGLLK KKIDGFMILV
601: ENVNWTSDDV PQGGNEYMNE VIIYLETLVS TAQQILPAKV LRRVLRDVLA HISERIVGTL CGDLVKRLSM AAIKGLDVDI QLLDSFTEQL TSLLTEKEAN
701: EMKTAFVEIR QMINLLLSSH PEKFLNPVIR ERSYHALDNR KVATVSEKLR DPSDSIFGTF GARGSRQNPK NKSLDTLIKR LKDVS
001: MQSSKGRRKV GSTTAGAGID SAEKLDELLI SSAICNGEDL GPFVRKTFGT GKPETLLHHL KFFARSKESE IEEVCKAHYQ DFIHAVDDLK SLLSDVESLK
101: SALSDSNSKL QSVAAPLLSS LDSLVEAQTV SKNVDLAIGA VTHCVRVMEL VSRANQHLQS GNFYMALKCV DSIESDFMEK TPSSTLKRML ENRIPAIRSY
201: VERKVNKEFG DWLVEIRVVS RNLGQLAIGE ASAARQREEE LRIKQRQAEE QSRLSLRDCV YALNEEEDDE FGSGHEGSDG GSSGGGLLGF DLTPLYRAYH
301: IHQTLSLGDT FKQYYYNNRD LQLTSDFQIA GFFIVEDRVL RTGGGLISKL EVETLWDTAV TKMCAVLEDQ FSRMQTANHL LLIKDYVSLL GVSLRRYGYA
401: VDSLLEVLSK HRDKYHELLL SDCRKQITEA LSADKFEQML MKKEYEYSMN VLSFQLQTSE IVPAFPFIAP FSTTVPDCCR IVRSFIEDSV SFMSHGGQLD
501: FYDVVKKYLD RLLGEVLDEA LLKLISTSVH GVSQAMQVAA NMAVFERACD FFFRHAAHLS GVPLRMAERG RRHFPLTKSQ NTAEDTLSGM LKKKIDGFMT
601: LLENVNWTSD DIPQGGNEYM NEVLIYLETL VSTAQQILPA KVLKRVLRDV LAHISEKIVG TLCGDLVKRL SMAAIKGLDV DIQLLDSFTE NLTPLLTDKE
701: AREMKKAFVE IRQMINLLLS SHPENFVNPV IRERSYNALD YRKVATVSEK FRDPSDSIFG TFGTRGSRQN PKNKSLDALI KRLKDVS
101: SALSDSNSKL QSVAAPLLSS LDSLVEAQTV SKNVDLAIGA VTHCVRVMEL VSRANQHLQS GNFYMALKCV DSIESDFMEK TPSSTLKRML ENRIPAIRSY
201: VERKVNKEFG DWLVEIRVVS RNLGQLAIGE ASAARQREEE LRIKQRQAEE QSRLSLRDCV YALNEEEDDE FGSGHEGSDG GSSGGGLLGF DLTPLYRAYH
301: IHQTLSLGDT FKQYYYNNRD LQLTSDFQIA GFFIVEDRVL RTGGGLISKL EVETLWDTAV TKMCAVLEDQ FSRMQTANHL LLIKDYVSLL GVSLRRYGYA
401: VDSLLEVLSK HRDKYHELLL SDCRKQITEA LSADKFEQML MKKEYEYSMN VLSFQLQTSE IVPAFPFIAP FSTTVPDCCR IVRSFIEDSV SFMSHGGQLD
501: FYDVVKKYLD RLLGEVLDEA LLKLISTSVH GVSQAMQVAA NMAVFERACD FFFRHAAHLS GVPLRMAERG RRHFPLTKSQ NTAEDTLSGM LKKKIDGFMT
601: LLENVNWTSD DIPQGGNEYM NEVLIYLETL VSTAQQILPA KVLKRVLRDV LAHISEKIVG TLCGDLVKRL SMAAIKGLDV DIQLLDSFTE NLTPLLTDKE
701: AREMKKAFVE IRQMINLLLS SHPENFVNPV IRERSYNALD YRKVATVSEK FRDPSDSIFG TFGTRGSRQN PKNKSLDALI KRLKDVS
Arabidopsis Description
SEC15BExocyst complex component SEC15B [Source:UniProtKB/Swiss-Prot;Acc:F4JHH5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.