CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KXG36501

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G02350.1	KXG36501	AT1G10180.1	23495664

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d040788_P001	Maize	cytosol, mitochondrion, plastid	97.9	97.9
Zm00001d009226_P001	Maize	mitochondrion	96.17	96.17
Os01t0351300-01	Rice	plasma membrane	93.09	94.25
TraesCS3B01G232000.1	Wheat	cytosol	90.12	90.57
TraesCS3A01G199000.2	Wheat	cytosol	90.12	90.57
HORVU0Hr1G006630.1	Barley	cytosol	90.0	86.07
TraesCS3D01G205600.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane, plastid	90.12	83.91
GSMUA_Achr3P24060_001	Banana	cytosol	63.09	66.54
VIT_07s0005g00680.t01	Wine grape	cytosol	60.74	61.35
Solyc09g075280.1.1	Tomato	nucleus	60.62	61.07
Bra018558.1-P	Field mustard	cytosol	59.14	60.18
KRH68203	Soybean	endoplasmic reticulum	59.26	60.15
GSMUA_Achr8P06600_001	Banana	cytosol	57.9	60.05
KRH14016	Soybean	mitochondrion	59.51	59.0
Bra036274.1-P	Field mustard	cytosol	57.16	58.98
CDY65634	Canola	cytosol	55.43	58.46
CDY50392	Canola	cytosol	55.06	58.15
AT4G02350.1	Thale cress	cytosol	55.93	57.56
EER92143	Sorghum	cytosol	42.84	43.92
EER91624	Sorghum	cytosol	40.12	41.09

Protein Annotations

Gene3D:1.10.357.30	Gene3D:1.20.58.670	MapMan:22.6.3.7	EntrezGene:8086341	UniProt:C5XJW5	EnsemblPlants:EES02923
ProteinID:EES02923	ProteinID:EES02923.1	InterPro:EXOC6/Sec15	GO:GO:0000003	GO:GO:0000145	GO:GO:0005575
GO:GO:0005576	GO:GO:0005615	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0005886	GO:GO:0006810	GO:GO:0006887	GO:GO:0006904	GO:GO:0007154	GO:GO:0008150
GO:GO:0009506	GO:GO:0009653	GO:GO:0009846	GO:GO:0009856	GO:GO:0009860	GO:GO:0009875
GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0016049	GO:GO:0030154	GO:GO:0040007
GO:GO:0060321	GO:GO:0070062	PFAM:PF04091	PIRSF:PIRSF025007	PANTHER:PTHR12702	PANTHER:PTHR12702:SF1
EnsemblPlantsGene:SORBI_3003G158700	unigene:Sbi.15053	UniParc:UPI0001A85158	RefSeq:XP_002457803.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr3:-:18231601..18235593

Molecular Weight (calculated)

88834.4 Da

IEP (calculated)

6.900

GRAVY (calculated)

-0.083

Length

810 amino acids

Sequence
(BLAST)

001: MRRKLPGDAP LSAAGAGHAS SASAPSEADL AQLSAAIAAG EDLGPFVRRA FACGRPEPLL ASLRGAARDR EAEIEELCRA HFHDFIRAVD DLRSLLADAD
101: ALKGSLSASH SALLSSAAPL LASLESFLVA RSLAGNLSSA LASSRRCVRL LALAARANAH LQAGNHGLYL ALRAVDAIDR DLASGPEPLP LPTLRRMLLS
201: VVPAVRAHAE REISREFSDW MVSIRAASRH LGQVAIGRSA AARQRQEELR SKHRPLEECI TLDDDGVGDL DDFAAAAATA DAADGAAAAS FDLTPLYRAM
301: HIHQTLELGE RFKKYYLENR KLQLTSDFDV IAATPFLESH QVFFSQIAGF FIVEDRVFRT GGGLTSRPDV DALWDAAVGK MVSVMEDNFS RMQTANHLLL
401: ITDYAALLSA TMRRYGYPVG MLLDVLAKHR DKYHDLLLAD CRRQVAEALA ADKFDQMLMR KEYEYSMNVL AFGIQSSDIT PAFPYVAPFS CTVPDICRIV
501: RSFIEDSVSF MAHGGGGDTY AAVKKYLGRI LSEVVDASIQ KLVDSGSGLS VSQAMQVAAN MSVMERACEF FTRHAAQLCG VPLRAVERGR RDFPLRRSRD
601: AAEALLLRLL RAKADEFMRQ SDGVSWMADD PPPGGNEYAN EVIIYLETLT STAQQILPLP VLRRVLVAVL AHISERIIEL FLNDSVKRFN ANAVTGIDTD
701: LKMFETFAEG MSSLFVDSGQ ESAKNEMKAA LVEARQLVNL LLSNSPENFL NPVIREKNYN KLDYRKVAII SEKFRDTSES YFSTFGTRGA RQNPKKKSLD
801: TLIKRLREAS

Best Arabidopsis Sequence Match ( AT4G02350.2 )
(BLAST)

001: MQSSKGRRKV GSTTAGAGID SAEKLDELLI SSAICNGEDL GPFVRKTFGT GKPETLLHHL KFFARSKESE IEEVCKAHYQ DFIHAVDDLK SLLSDVESLK
101: SALSDSNSKL QSVAAPLLSS LDSLVEAQTV SKNVDLAIGA VTHCVRVMEL VSRANQHLQS GNFYMALKCV DSIESDFMEK TPSSTLKRML ENRIPAIRSY
201: VERKVNKEFG DWLVEIRVVS RNLGQLAIGE ASAARQREEE LRIKQRQAEE QSRLSLRDCV YALNEEEDDE FGSGHEGSDG GSSGGGLLGF DLTPLYRAYH
301: IHQTLSLGDT FKQYYYNNRD LQLTSDFQIA GFFIVEDRVL RTGGGLISKL EVETLWDTAV TKMCAVLEDQ FSRMQTANHL LLIKDYVSLL GVSLRRYGYA
401: VDSLLEVLSK HRDKYHELLL SDCRKQITEA LSADKFEQML MKKEYEYSMN VLSFQLQTSE IVPAFPFIAP FSTTVPDCCR IVRSFIEDSV SFMSHGGQLD
501: FYDVVKKYLD RLLGEVLDEA LLKLISTSVH GVSQAMQVAA NMAVFERACD FFFRHAAHLS GVPLRMAERG RRHFPLTKSQ NTAEDTLSGM LKKKIDGFMT
601: LLENVNWTSD DIPQGGNEYM NEVLIYLETL VSTAQQILPA KVLKRVLRDV LAHISEKIVG TLCGDLVKRL SMAAIKGLDV DIQLLDSFTE NLTPLLTDKE
701: AREMKKAFVE IRQMINLLLS SHPENFVNPV IRERSYNALD YRKVATVSEK FRDPSDSIFG TFGTRGSRQN PKNKSLDALI KRLKDVS

Arabidopsis Description

SEC15BExocyst complex component SEC15B [Source:UniProtKB/Swiss-Prot;Acc:F4JHH5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.