Skip to main content
crop-pal logo
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d014179_P001 Maize cytosol 91.4 91.75
Os10t0415200-02 Rice cytosol 76.99 77.19
TraesCS2D01G447800.1 Wheat cytosol 75.47 75.67
HORVU2Hr1G106010.2 Barley cytosol 75.22 75.32
TraesCS2B01G469400.1 Wheat cytosol 74.84 75.03
TraesCS2A01G448600.1 Wheat cytosol 74.46 74.65
EER92143 Sorghum cytosol 66.75 66.84
GSMUA_AchrUn_... Banana cytosol 61.82 63.67
GSMUA_Achr9P18870_001 Banana cytosol 59.17 62.65
GSMUA_Achr1P23270_001 Banana cytosol 59.17 59.17
VIT_08s0040g00840.t01 Wine grape cytosol 58.91 59.06
Solyc12g096290.1.1 Tomato cytosol 55.25 57.12
PGSC0003DMT400075539 Potato cytosol 57.02 57.02
AT3G56640.1 Thale cress cytosol 55.75 55.82
KRH33282 Soybean cytosol 55.63 55.77
Bra007260.1-P Field mustard cytosol 52.47 55.48
CDY56776 Canola cytosol 52.47 55.48
CDX72119 Canola cytosol 52.47 55.48
KRH71637 Soybean cytosol 54.74 54.88
KRH66189 Soybean cytosol 53.35 53.55
KRH07372 Soybean cytosol 53.22 53.43
CDY61690 Canola cytosol 4.93 52.0
CDY05466 Canola cytosol 4.93 52.0
EES02923 Sorghum cytosol, mitochondrion 41.09 40.12
Protein Annotations
Gene3D:1.10.357.30Gene3D:1.20.58.670MapMan:22.6.3.7EntrezGene:8059473UniProt:C5X1M1EnsemblPlants:EER91624
ProteinID:EER91624ProteinID:EER91624.1InterPro:EXOC6/Sec15GO:GO:0000145GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0006810GO:GO:0006887GO:GO:0006904GO:GO:0008150
GO:GO:0009987PFAM:PF04091PIRSF:PIRSF025007PANTHER:PTHR12702PANTHER:PTHR12702:SF5EnsemblPlantsGene:SORBI_3001G248900
UniParc:UPI0001A82049RefSeq:XP_002464626.1SEG:seg:::
Description
hypothetical protein
Coordinates
chr1:+:26841679..26846005
Molecular Weight (calculated)
89021.2 Da
IEP (calculated)
5.478
GRAVY (calculated)
-0.089
Length
791 amino acids
Sequence
(BLAST)
001: MTAQTKKRGA AENGDGGVSL GLAAFIANNE DVGPIVRHAF ESGKPEALLH SLHNIVKMKE VEIEEICRLH YEEFILAVDE LRGVLVDADE LKGTLSDENL
101: RLQEVASALL LKLDELLEIY SVNSNVGEAL ATLKICLQVT NLCKICNRDI AEAKLLSALK TLELIEKDYL QNIPLKLLKK VIHKQVPMVK LYIEKKVCSE
201: FNEWLVYIRR TAKEIGQVAI DQTSLTHQKD EGMCARQREA EESSRVGFDV NAYTLDVEHM SEEAMLEFDL APVYRAHHIH IGLGLGEKFR EYYYNNRLMQ
301: LNLDLQISTS QPFVESYQPF LAQVAGFFII EDRVLRTADG LLSESQVDTM LETAISKVTQ ILEEQFSRID AANHLLLIKG YVSLFGATLK KYGYRSMSLV
401: EILDKTRDKY LELLLSDCRK KLNYAFSKDS YERMVIKKEN EYDTNIAAFQ LEPVEGVPNL PYVAPFSSSV PNACRIVRSF IEELVSYLSH SGSTNIYDVV
501: KSYLDKFLIE TLNDGFLNLI HGGSLEFPQV VQIAGNIAIL EQSCDMFLWH AARLCGVPRG LLEKPHSGLA ARAVLKASQN AAYSGLITLV NSKIDEFMLQ
601: LTSINWTLEE TPEHANDYMN EVIIYLHEVV SSGQQIVPRD ALFKVVSGAL SHISDSITTV LLSDRVKRFN ANAVASIDID LKVLEGFADD TYHMTGFSDL
701: RKETSFRDCL VEIRQLINLL LSNQPESFVN PVTREQSYGA LDHKKVAIIC DKFKDAPDSL FGSLSSRATV QMQSARKKSL DVLKRRLKDF S
Best Arabidopsis Sequence Match ( AT3G56640.1 )
(BLAST)
001: MMEAKPKRRI VTENGDTGED LVLATLIGNG DDVGPLVRHA FEMGRPEPLV HQLKNVARKK EAEIEDLCKT HYEEFIVAVD ELRGVLVDAE ELKSDLASDN
101: FRLQEVGSAL LVKLEELLES YAVKKNVTEA IKMSKICVQA LELCVKCNSY ISEGQFYHAL KTMDLIEKSY LKLIPLKVLK LVIERRIPVI KTHIEKKVCS
201: QFNEWLVHIR SSSKNIGQTA IGLTASARQR EEEMLERQRR AEEQNTGGLG ELAYTLDVED SEQDSVLKFD LTPLYRAYHI HTILGVPERF RDYYYENRLL
301: QLQSDLQITY TQPFVESYQT FLAQVAGYFI VEDRVIRTAG DFLLADQVET MWETAISKIV AILENQFARM DSPTHLLLVK DYVTLLGTTL RQYGYEVGPV
401: LDALDKSRDK YHELLLEECR KQIVTAITED TYQQMVIKKE ADYENNVLSF NLQTSDIMPA FTYIAPFSSM VPDVCRIIRS YIKGSVDYLS YGVNTNFFSV
501: LRKYLDKILI DVLNEVILET ISNNSIGVSQ AMQIAANISF LEKASDYFLR HAAQLCGIPS RSVERPQASL AAKVVLKTSR DAAYLALLNV VNTKLDEFMK
601: LTENVNWTTE EMPQGPHEYI NEVVIYLETV MSTAQQILPM DALYKVGVGA IEHISNSIVS TFLSDSIKRF NANAVSAINH DLRVIENFAD ERYHSSGLNE
701: IYKEGSFRSY LVEARQLINL LSSSQPENFM NPVIRERNYN TLDYKKVATI CEKFKDSADG IFGSLANRNT KLTAKKKSMD MLKKRLKEFN
Arabidopsis Description
SEC15AExocyst complex component [Source:UniProtKB/TrEMBL;Acc:A0A178V8H8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.