Factsheet for Solyc12g096290.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400075539	Potato	cytosol	98.04	94.82
VIT_08s0040g00840.t01	Wine grape	cytosol	76.34	74.02
Bra007260.1-P	Field mustard	cytosol	68.37	69.92
CDX72119	Canola	cytosol	68.37	69.92
CDY56776	Canola	cytosol	68.37	69.92
AT3G56640.1	Thale cress	cytosol	70.72	68.48
KRH07372	Soybean	cytosol	69.28	67.26
KRH66189	Soybean	cytosol	69.02	67.01
KRH71637	Soybean	cytosol	68.37	66.29
KRH33282	Soybean	cytosol	67.58	65.53
GSMUA_AchrUn_...	Banana	cytosol	64.71	64.45
GSMUA_Achr9P18870_001	Banana	cytosol	60.65	62.12
EER92143	Sorghum	cytosol	62.48	60.51
Zm00001d047268_P001	Maize	cytosol	61.83	59.87
GSMUA_Achr1P23270_001	Banana	cytosol	61.05	59.04
Os10t0415200-02	Rice	cytosol	59.74	57.92
Os03t0163500-01	Rice	cytosol, plasma membrane	58.95	57.23
HORVU4Hr1G073920.1	Barley	cytosol	57.65	55.82
HORVU4Hr1G074030.1	Barley	cytosol	57.52	55.63
TraesCS4B01G279000.1	Wheat	cytosol	57.25	55.44
TraesCS4D01G277500.1	Wheat	cytosol	57.25	55.44
TraesCS4A01G025100.1	Wheat	cytosol	57.12	55.32
EER91624	Sorghum	cytosol	57.12	55.25
HORVU2Hr1G106010.2	Barley	cytosol	56.99	55.19
TraesCS2A01G448600.1	Wheat	cytosol	56.86	55.13
TraesCS2D01G447800.1	Wheat	cytosol	56.6	54.88
TraesCS2B01G469400.1	Wheat	cytosol	56.08	54.37
Zm00001d014179_P001	Maize	cytosol	55.69	54.06
Solyc09g075280.1.1	Tomato	nucleus	52.16	49.63
Zm00001d034208_P001	Maize	cytosol	35.95	46.93
CDY61690	Canola	cytosol	4.31	44.0
CDY05466	Canola	cytosol	4.31	44.0
Zm00001d024189_P001	Maize	cytosol, golgi	22.75	36.33

Protein Annotations

Gene3D:1.10.357.30	Gene3D:1.20.58.670	MapMan:22.6.3.7	ncoils:Coil	InterPro:EXOC6/Sec15	GO:GO:0000003
GO:GO:0000145	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0006810	GO:GO:0006887	GO:GO:0006904	GO:GO:0007154	GO:GO:0008150	GO:GO:0009653
GO:GO:0009846	GO:GO:0009856	GO:GO:0009860	GO:GO:0009875	GO:GO:0009987	GO:GO:0016043
GO:GO:0016049	GO:GO:0030154	GO:GO:0040007	GO:GO:0060321	UniProt:K4DHA2	PFAM:PF04091
PIRSF:PIRSF025007	PANTHER:PTHR12702	PANTHER:PTHR12702:SF5	EnsemblPlantsGene:Solyc12g096290.1	EnsemblPlants:Solyc12g096290.1.1	UniParc:UPI0002769BB0
SEG:seg	:	:	:	:	:

Description

Exocyst complex component SEC15A [Source:Projected from Arabidopsis thaliana (AT3G56640) UniProtKB/Swiss-Prot;Acc:Q9LXX6]

Coordinates

chr12:+:65277142..65279439

Molecular Weight (calculated)

86702.7 Da

IEP (calculated)

5.322

GRAVY (calculated)

-0.114

Length

765 amino acids

Sequence
(BLAST)

001: MISNGEDLGP MVRLAFESGK PDALLQQLKN VVKKKEVEIE ELCKLHYEEF IIAVDELRGV LVDAEELKAE LQTDNLKLQD VGSVLLLKLE ELLETFSIKK
101: NVTEAIKMSG NCVQVLELCA KCNNHVSEGR FYPAIKAIDL IEKSYLQNIP VKPLRTMIEK RIPLIKLHIE KRVTSEINEW LVHIRSTAKD IGQTAIGYAA
201: SARQRDEDML ARQRKAEEQS CLGLGDFTYT LDVEEINEES VLKFDLTPLY RACHIHGCMG IQEQFREYYY KNRLLQLSSD LQISLSQPFI ESHQIFLAQI
301: AGYFIVEDRV LRTAGGLLLP NQVETMWETA VGKVTALLEE QFSHMDSASH LLMVKDYVTL LGSTLRQYGY EVSAILGTLN SSREKYHELL LAECRQQITA
401: IVTNDTFEQM VMKRESDYQA NVLLFHLQTS DIMPAFPFIS PFSSMVPECC RIVKSFIKDS VNYLSYGSQM NFFDFVKKYL DKLLIDVLNE VLLETIYSGT
501: TGVSQAMQIA ANIAVFERAC DFFLQHAAQQ CGIPVRLVER PQGSLTAKIV LKTSRDAAYI ALLSLVNAKL DEFMSLTENV HWTAEDAPQQ GNECMNEVVI
601: YLDTLLSTAQ QILPLDALYK VGIGALEHIS NSIVSTFLSD SIKRFNVNAV MSINHDLKAL ESFADERFDS TGLSEVYKDD SFRSCLVEVR QLINLLLSSQ
701: PENFMNPVIR EKNYNALDHK KVSTICDKYK DSADGLFGSL SSRNTKQSAR KKSMDILKKR LRDFN

Best Arabidopsis Sequence Match ( AT3G56640.1 )
(BLAST)

001: MMEAKPKRRI VTENGDTGED LVLATLIGNG DDVGPLVRHA FEMGRPEPLV HQLKNVARKK EAEIEDLCKT HYEEFIVAVD ELRGVLVDAE ELKSDLASDN
101: FRLQEVGSAL LVKLEELLES YAVKKNVTEA IKMSKICVQA LELCVKCNSY ISEGQFYHAL KTMDLIEKSY LKLIPLKVLK LVIERRIPVI KTHIEKKVCS
201: QFNEWLVHIR SSSKNIGQTA IGLTASARQR EEEMLERQRR AEEQNTGGLG ELAYTLDVED SEQDSVLKFD LTPLYRAYHI HTILGVPERF RDYYYENRLL
301: QLQSDLQITY TQPFVESYQT FLAQVAGYFI VEDRVIRTAG DFLLADQVET MWETAISKIV AILENQFARM DSPTHLLLVK DYVTLLGTTL RQYGYEVGPV
401: LDALDKSRDK YHELLLEECR KQIVTAITED TYQQMVIKKE ADYENNVLSF NLQTSDIMPA FTYIAPFSSM VPDVCRIIRS YIKGSVDYLS YGVNTNFFSV
501: LRKYLDKILI DVLNEVILET ISNNSIGVSQ AMQIAANISF LEKASDYFLR HAAQLCGIPS RSVERPQASL AAKVVLKTSR DAAYLALLNV VNTKLDEFMK
601: LTENVNWTTE EMPQGPHEYI NEVVIYLETV MSTAQQILPM DALYKVGVGA IEHISNSIVS TFLSDSIKRF NANAVSAINH DLRVIENFAD ERYHSSGLNE
701: IYKEGSFRSY LVEARQLINL LSSSQPENFM NPVIRERNYN TLDYKKVATI CEKFKDSADG IFGSLANRNT KLTAKKKSMD MLKKRLKEFN

Arabidopsis Description

SEC15AExocyst complex component [Source:UniProtKB/TrEMBL;Acc:A0A178V8H8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.