Factsheet for GSMUA_Achr1P23270_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P18870_001	Banana	cytosol	73.83	78.18
GSMUA_AchrUn_...	Banana	cytosol	73.7	75.91
VIT_08s0040g00840.t01	Wine grape	cytosol	61.95	62.1
PGSC0003DMT400075539	Potato	cytosol	61.19	61.19
Solyc12g096290.1.1	Tomato	cytosol	59.04	61.05
Zm00001d047268_P001	Maize	cytosol	60.81	60.89
EER92143	Sorghum	cytosol	60.68	60.76
Os10t0415200-02	Rice	cytosol	59.67	59.82
EER91624	Sorghum	cytosol	59.17	59.17
TraesCS2D01G447800.1	Wheat	cytosol	58.53	58.68
HORVU2Hr1G106010.2	Barley	cytosol	58.53	58.61
TraesCS2B01G469400.1	Wheat	cytosol	57.9	58.05
Zm00001d014179_P001	Maize	cytosol	57.77	57.99
Os03t0163500-01	Rice	cytosol, plasma membrane	57.77	57.99
TraesCS2A01G448600.1	Wheat	cytosol	57.77	57.92
AT3G56640.1	Thale cress	cytosol	57.27	57.34
KRH66189	Soybean	cytosol	56.89	57.11
KRH07372	Soybean	cytosol	56.76	56.98
HORVU4Hr1G073920.1	Barley	cytosol	56.64	56.71
HORVU4Hr1G074030.1	Barley	cytosol	56.51	56.51
CDY56776	Canola	cytosol	53.35	56.42
Bra007260.1-P	Field mustard	cytosol	53.35	56.42
CDX72119	Canola	cytosol	53.35	56.42
KRH33282	Soybean	cytosol	56.13	56.27
CDY61690	Canola	cytosol	5.31	56.0
CDY05466	Canola	cytosol	5.31	56.0
TraesCS4B01G279000.1	Wheat	cytosol	55.88	55.95
KRH71637	Soybean	cytosol	55.75	55.89
TraesCS4A01G025100.1	Wheat	cytosol	55.75	55.82
TraesCS4D01G277500.1	Wheat	cytosol	55.75	55.82
Zm00001d034208_P001	Maize	cytosol	35.65	48.12
GSMUA_Achr3P24060_001	Banana	cytosol	45.26	46.61
GSMUA_Achr8P06600_001	Banana	cytosol	42.6	43.15
Zm00001d024189_P001	Maize	cytosol, golgi	20.1	33.19

Protein Annotations

Gene3D:1.10.357.30	Gene3D:1.20.58.670	MapMan:22.6.3.7	ncoils:Coil	InterPro:EXOC6/Sec15	GO:GO:0000145
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006887
GO:GO:0006904	GO:GO:0008150	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr1G23270_001	EnsemblPlants:GSMUA_Achr1P23270_001	EnsemblPlants:GSMUA_Achr1T23270_001
UniProt:M0S2D5	PFAM:PF04091	PIRSF:PIRSF025007	PANTHER:PTHR12702	PANTHER:PTHR12702:SF5	UniParc:UPI0002965302
SEG:seg	:	:	:	:	:

Description

Probable exocyst complex component 6 [Source:GMGC_GENE;Acc:GSMUA_Achr1G23270_001]

Coordinates

chr1:+:17465616..17467991

Molecular Weight (calculated)

90073.3 Da

IEP (calculated)

5.545

GRAVY (calculated)

-0.207

Length

791 amino acids

Sequence
(BLAST)

001: MHAPSKKRNV VENGDEGIDV VLVRSIINGE HENVGPIVRY AFERGKPEAL LHQLVNLVGK KEVEIEELCR LHYEEFILAV DELRDVLVDA DELKSSLSNQ
101: NFQLQEVAST LLPKFDELLE LYSIKKNVTK AIETLEVCLQ LSKLCLTCNM HVSNNRFYPA VRILDLIEKD YIQKTPFQAL RKAIEKQIPV IKLHIEKKVC
201: SEFDDWLVHI RSMAVEIGQL AIGHASSARQ REDEKRARRE EAEKQSRFGV GDPVYTLDVE HVDEDSVLEF DLAPVYRAHH IHSCLSLEDK FRKNYYKNRL
301: MQLNLDLQMP PVQSFLESHR PFFAQIAGFF IVENRVLQTA GGLVSESQVE TLWNTAISKM TSVLEDQFSR MDTANHLLLI KDFVTLVADT LMHHGYGLTP
401: LLEVLDNNRD KYHELLLSEC RKQIGDTLAS DTFEQMVIKK EYEYNMNVVS FHLQSSDTLP DFPYIAPFSS SVPDICRVVR SFIEDSVNYL SYGGPVNFDD
501: VLKKYLNKLM IDDLNKALLK VIHTGNLDVS QAMQIAANIA VLECTCDLFL CQTAQLCSVP LHLVERPHVG LTAKAVFKAS QNAAYDALLN VVDSKLDEYL
601: ALMNNIEWTA DKAPEHANDY IQETVIYLDS LISTAQQILP LDGIYKVGVG ALNHISDSIM AALLSDRLKR FNLNSVIGID NDLKMLESFA DERFQSTGLS
701: DLRKDCSFRD CLIESRQLVN LVLSNQPENF KNPVMREKSY GALDYKKVAI ISEKFKDSSE KLFGSLSNWS TEPKSRKKSM DMLKRKLKEF S

Best Arabidopsis Sequence Match ( AT3G56640.1 )
(BLAST)

001: MMEAKPKRRI VTENGDTGED LVLATLIGNG DDVGPLVRHA FEMGRPEPLV HQLKNVARKK EAEIEDLCKT HYEEFIVAVD ELRGVLVDAE ELKSDLASDN
101: FRLQEVGSAL LVKLEELLES YAVKKNVTEA IKMSKICVQA LELCVKCNSY ISEGQFYHAL KTMDLIEKSY LKLIPLKVLK LVIERRIPVI KTHIEKKVCS
201: QFNEWLVHIR SSSKNIGQTA IGLTASARQR EEEMLERQRR AEEQNTGGLG ELAYTLDVED SEQDSVLKFD LTPLYRAYHI HTILGVPERF RDYYYENRLL
301: QLQSDLQITY TQPFVESYQT FLAQVAGYFI VEDRVIRTAG DFLLADQVET MWETAISKIV AILENQFARM DSPTHLLLVK DYVTLLGTTL RQYGYEVGPV
401: LDALDKSRDK YHELLLEECR KQIVTAITED TYQQMVIKKE ADYENNVLSF NLQTSDIMPA FTYIAPFSSM VPDVCRIIRS YIKGSVDYLS YGVNTNFFSV
501: LRKYLDKILI DVLNEVILET ISNNSIGVSQ AMQIAANISF LEKASDYFLR HAAQLCGIPS RSVERPQASL AAKVVLKTSR DAAYLALLNV VNTKLDEFMK
601: LTENVNWTTE EMPQGPHEYI NEVVIYLETV MSTAQQILPM DALYKVGVGA IEHISNSIVS TFLSDSIKRF NANAVSAINH DLRVIENFAD ERYHSSGLNE
701: IYKEGSFRSY LVEARQLINL LSSSQPENFM NPVIRERNYN TLDYKKVATI CEKFKDSADG IFGSLANRNT KLTAKKKSMD MLKKRLKEFN

Arabidopsis Description

SEC15AExocyst complex component [Source:UniProtKB/TrEMBL;Acc:A0A178V8H8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.