Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007260.1-P | Field mustard | cytosol | 89.11 | 94.12 |
| CDY56776 | Canola | cytosol | 89.11 | 94.12 |
| CDX72119 | Canola | cytosol | 88.99 | 93.98 |
| CDY05466 | Canola | cytosol | 8.48 | 89.33 |
| CDY61690 | Canola | cytosol | 8.48 | 89.33 |
| VIT_08s0040g00840.t01 | Wine grape | cytosol | 74.18 | 74.27 |
| KRH07372 | Soybean | cytosol | 71.01 | 71.19 |
| Solyc12g096290.1.1 | Tomato | cytosol | 68.48 | 70.72 |
| KRH66189 | Soybean | cytosol | 70.0 | 70.18 |
| PGSC0003DMT400075539 | Potato | cytosol | 70.25 | 70.16 |
| KRH71637 | Soybean | cytosol | 68.86 | 68.95 |
| KRH33282 | Soybean | cytosol | 68.48 | 68.57 |
| GSMUA_AchrUn_... | Banana | cytosol | 61.39 | 63.15 |
| GSMUA_Achr9P18870_001 | Banana | cytosol | 56.08 | 59.3 |
| EER92143 | Sorghum | cytosol | 58.73 | 58.73 |
| Zm00001d047268_P001 | Maize | cytosol | 58.35 | 58.35 |
| GSMUA_Achr1P23270_001 | Banana | cytosol | 57.34 | 57.27 |
| Os03t0163500-01 | Rice | cytosol, plasma membrane | 56.2 | 56.35 |
| EER91624 | Sorghum | cytosol | 55.82 | 55.75 |
| Os10t0415200-02 | Rice | cytosol | 55.06 | 55.13 |
| Zm00001d014179_P001 | Maize | cytosol | 54.05 | 54.19 |
| TraesCS2D01G447800.1 | Wheat | cytosol | 54.05 | 54.12 |
| HORVU4Hr1G073920.1 | Barley | cytosol | 53.92 | 53.92 |
| TraesCS2A01G448600.1 | Wheat | cytosol | 53.8 | 53.87 |
| HORVU2Hr1G106010.2 | Barley | cytosol | 53.8 | 53.8 |
| TraesCS4B01G279000.1 | Wheat | cytosol | 53.8 | 53.8 |
| HORVU4Hr1G074030.1 | Barley | cytosol | 53.8 | 53.73 |
| TraesCS4D01G277500.1 | Wheat | cytosol | 53.67 | 53.67 |
| TraesCS4A01G025100.1 | Wheat | cytosol | 53.54 | 53.54 |
| TraesCS2B01G469400.1 | Wheat | cytosol | 53.42 | 53.49 |
| AT4G02350.1 | Thale cress | cytosol | 47.72 | 47.9 |
| Zm00001d034208_P001 | Maize | cytosol | 34.81 | 46.93 |
| Zm00001d024189_P001 | Maize | cytosol, golgi | 20.38 | 33.61 |
Protein Annotations
| Gene3D:1.10.357.30 | Gene3D:1.20.58.670 | MapMan:22.6.3.7 | EntrezGene:824831 | UniProt:A0A178V8H8 | ProteinID:AEE79547.1 |
| ArrayExpress:AT3G56640 | EnsemblPlantsGene:AT3G56640 | RefSeq:AT3G56640 | TAIR:AT3G56640 | RefSeq:AT3G56640-TAIR-G | EnsemblPlants:AT3G56640.1 |
| TAIR:AT3G56640.1 | ProteinID:CAB88067.1 | ncoils:Coil | InterPro:EXOC6/Sec15 | GO:GO:0000003 | GO:GO:0000145 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006810 |
| GO:GO:0006887 | GO:GO:0006904 | GO:GO:0007154 | GO:GO:0008150 | GO:GO:0009653 | GO:GO:0009846 |
| GO:GO:0009856 | GO:GO:0009860 | GO:GO:0009875 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016049 |
| GO:GO:0030154 | GO:GO:0040007 | GO:GO:0060321 | RefSeq:NP_191223.2 | ProteinID:OAP01715.1 | PFAM:PF04091 |
| PIRSF:PIRSF025007 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 |
| PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR12702 | PANTHER:PTHR12702:SF5 |
| UniProt:Q9LXX6 | Symbol:SEC15A | UniParc:UPI0001E92DAB | SEG:seg | : | : |
Description
SEC15AExocyst complex component [Source:UniProtKB/TrEMBL;Acc:A0A178V8H8]
Coordinates
chr3:+:20981316..20984581
Molecular Weight (calculated)
90005.3 Da
IEP (calculated)
5.525
GRAVY (calculated)
-0.205
Length
790 amino acids
Sequence
(BLAST)
(BLAST)
001: MMEAKPKRRI VTENGDTGED LVLATLIGNG DDVGPLVRHA FEMGRPEPLV HQLKNVARKK EAEIEDLCKT HYEEFIVAVD ELRGVLVDAE ELKSDLASDN
101: FRLQEVGSAL LVKLEELLES YAVKKNVTEA IKMSKICVQA LELCVKCNSY ISEGQFYHAL KTMDLIEKSY LKLIPLKVLK LVIERRIPVI KTHIEKKVCS
201: QFNEWLVHIR SSSKNIGQTA IGLTASARQR EEEMLERQRR AEEQNTGGLG ELAYTLDVED SEQDSVLKFD LTPLYRAYHI HTILGVPERF RDYYYENRLL
301: QLQSDLQITY TQPFVESYQT FLAQVAGYFI VEDRVIRTAG DFLLADQVET MWETAISKIV AILENQFARM DSPTHLLLVK DYVTLLGTTL RQYGYEVGPV
401: LDALDKSRDK YHELLLEECR KQIVTAITED TYQQMVIKKE ADYENNVLSF NLQTSDIMPA FTYIAPFSSM VPDVCRIIRS YIKGSVDYLS YGVNTNFFSV
501: LRKYLDKILI DVLNEVILET ISNNSIGVSQ AMQIAANISF LEKASDYFLR HAAQLCGIPS RSVERPQASL AAKVVLKTSR DAAYLALLNV VNTKLDEFMK
601: LTENVNWTTE EMPQGPHEYI NEVVIYLETV MSTAQQILPM DALYKVGVGA IEHISNSIVS TFLSDSIKRF NANAVSAINH DLRVIENFAD ERYHSSGLNE
701: IYKEGSFRSY LVEARQLINL LSSSQPENFM NPVIRERNYN TLDYKKVATI CEKFKDSADG IFGSLANRNT KLTAKKKSMD MLKKRLKEFN
101: FRLQEVGSAL LVKLEELLES YAVKKNVTEA IKMSKICVQA LELCVKCNSY ISEGQFYHAL KTMDLIEKSY LKLIPLKVLK LVIERRIPVI KTHIEKKVCS
201: QFNEWLVHIR SSSKNIGQTA IGLTASARQR EEEMLERQRR AEEQNTGGLG ELAYTLDVED SEQDSVLKFD LTPLYRAYHI HTILGVPERF RDYYYENRLL
301: QLQSDLQITY TQPFVESYQT FLAQVAGYFI VEDRVIRTAG DFLLADQVET MWETAISKIV AILENQFARM DSPTHLLLVK DYVTLLGTTL RQYGYEVGPV
401: LDALDKSRDK YHELLLEECR KQIVTAITED TYQQMVIKKE ADYENNVLSF NLQTSDIMPA FTYIAPFSSM VPDVCRIIRS YIKGSVDYLS YGVNTNFFSV
501: LRKYLDKILI DVLNEVILET ISNNSIGVSQ AMQIAANISF LEKASDYFLR HAAQLCGIPS RSVERPQASL AAKVVLKTSR DAAYLALLNV VNTKLDEFMK
601: LTENVNWTTE EMPQGPHEYI NEVVIYLETV MSTAQQILPM DALYKVGVGA IEHISNSIVS TFLSDSIKRF NANAVSAINH DLRVIENFAD ERYHSSGLNE
701: IYKEGSFRSY LVEARQLINL LSSSQPENFM NPVIRERNYN TLDYKKVATI CEKFKDSADG IFGSLANRNT KLTAKKKSMD MLKKRLKEFN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.