CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047268_P001	Maize	cytosol	94.94	94.94
Os03t0163500-01	Rice	cytosol, plasma membrane	83.92	84.14
HORVU4Hr1G073920.1	Barley	cytosol	79.62	79.62
HORVU4Hr1G074030.1	Barley	cytosol	79.49	79.39
TraesCS4A01G025100.1	Wheat	cytosol	78.23	78.23
TraesCS4D01G277500.1	Wheat	cytosol	78.1	78.1
TraesCS4B01G279000.1	Wheat	cytosol	77.97	77.97
Zm00001d034208_P001	Maize	cytosol	55.7	75.09
GSMUA_AchrUn_...	Banana	cytosol	64.94	66.8
EER91624	Sorghum	cytosol	66.84	66.75
GSMUA_Achr9P18870_001	Banana	cytosol	60.13	63.59
Solyc12g096290.1.1	Tomato	cytosol	60.51	62.48
VIT_08s0040g00840.t01	Wine grape	cytosol	61.9	61.98
PGSC0003DMT400075539	Potato	cytosol	61.39	61.31
GSMUA_Achr1P23270_001	Banana	cytosol	60.76	60.68
AT3G56640.1	Thale cress	cytosol	58.73	58.73
Bra007260.1-P	Field mustard	cytosol	54.68	57.75
CDY56776	Canola	cytosol	54.68	57.75
CDX72119	Canola	cytosol	54.68	57.75
KRH66189	Soybean	cytosol	57.09	57.23
KRH07372	Soybean	cytosol	57.09	57.23
KRH33282	Soybean	cytosol	56.2	56.27
CDY61690	Canola	cytosol	5.32	56.0
CDY05466	Canola	cytosol	5.32	56.0
KRH71637	Soybean	cytosol	54.68	54.75
Zm00001d024189_P001	Maize	cytosol, golgi	33.16	54.7
EES02923	Sorghum	cytosol, mitochondrion	43.92	42.84

Protein Annotations

Gene3D:1.10.357.30	Gene3D:1.20.58.670	MapMan:22.6.3.7	EntrezGene:8080418	UniProt:C5WWN4	ncoils:Coil
EnsemblPlants:EER92143	ProteinID:EER92143	ProteinID:EER92143.1	InterPro:EXOC6/Sec15	GO:GO:0000145	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0006904
GO:GO:0008150	GO:GO:0009987	PFAM:PF04091	PIRSF:PIRSF025007	PANTHER:PTHR12702	PANTHER:PTHR12702:SF5
EnsemblPlantsGene:SORBI_3001G340800	UniParc:UPI0001A82163	RefSeq:XP_002465145.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:+:62815111..62819064

Molecular Weight (calculated)

89627.3 Da

IEP (calculated)

5.824

GRAVY (calculated)

-0.150

Length

790 amino acids

Sequence
(BLAST)

001: MAAPQPKKRT IVESGDGGLG LGLATFIANG EDLGPIIRHS FDSGKPEALM QNLRSIVKKK EVEIEELCRL HYEDFIVAVD ELRGVLVDAD ELKGMLSGEN
101: SHLQEASTDQ LLKLDELLEL YSVKKNIGEA ITTLKICVKV FSLCMTCNNY IAEAKFHPAL KTLDLIQKGY LRNIPLKLLK KVVARQIPLI KLHIEKKVCS
201: EFNDWLVHIR RMAKQIGQAS ISQASLARQK DEEMRARQRE AEGHSHAGPD EHLYTLDLEN TEEESALHFD LTPVYRAHHM HTCLGIGEKF RDYYYKNRLM
301: QLNLDMQIST SQPFLESHQP FLAQVAGFFI VEERVLRTAD GLLLESQVET TWETAIGKIT SILEEQFSRM RTASHFLLIK DYVTLLGAAV NKYGYRITQL
401: IEVLEKTRDK YHQLLLLECR KQVDDILTND SYEQMVIKKE YEYNMNVTAF HLEHDDAIPD FPYVTSFSSS VPDVCRIVRS FIEDSVSYLS YGGVMNIFDV
501: VKAFLDRLLI EVLNDSLLNM IYARSLGMSQ MMQLAGNISV LEQACGMFLL HSAQLCGIPK RVAERSHSGL TARAVLKASQ NAVYNALINL TNFKVDEFMV
601: LLEEVNWIAE EAPDNSNEYV NEVLIYLETL VSTAQQILPL EALYKVVSGA MSHISDSIMT TLLNDGVKRF TVNAVLGIDI DLKMLEAFAD EKFDSTGLSD
701: LGKETTFRDC LVEIRQLVNL LLSSQPENFM NPVIRQRNYG SLDYKKLSII CDKYKDTADS LFGSLSNRNT QQSARKKSMD VLKRRLKDFS

Best Arabidopsis Sequence Match ( AT3G56640.1 )
(BLAST)

001: MMEAKPKRRI VTENGDTGED LVLATLIGNG DDVGPLVRHA FEMGRPEPLV HQLKNVARKK EAEIEDLCKT HYEEFIVAVD ELRGVLVDAE ELKSDLASDN
101: FRLQEVGSAL LVKLEELLES YAVKKNVTEA IKMSKICVQA LELCVKCNSY ISEGQFYHAL KTMDLIEKSY LKLIPLKVLK LVIERRIPVI KTHIEKKVCS
201: QFNEWLVHIR SSSKNIGQTA IGLTASARQR EEEMLERQRR AEEQNTGGLG ELAYTLDVED SEQDSVLKFD LTPLYRAYHI HTILGVPERF RDYYYENRLL
301: QLQSDLQITY TQPFVESYQT FLAQVAGYFI VEDRVIRTAG DFLLADQVET MWETAISKIV AILENQFARM DSPTHLLLVK DYVTLLGTTL RQYGYEVGPV
401: LDALDKSRDK YHELLLEECR KQIVTAITED TYQQMVIKKE ADYENNVLSF NLQTSDIMPA FTYIAPFSSM VPDVCRIIRS YIKGSVDYLS YGVNTNFFSV
501: LRKYLDKILI DVLNEVILET ISNNSIGVSQ AMQIAANISF LEKASDYFLR HAAQLCGIPS RSVERPQASL AAKVVLKTSR DAAYLALLNV VNTKLDEFMK
601: LTENVNWTTE EMPQGPHEYI NEVVIYLETV MSTAQQILPM DALYKVGVGA IEHISNSIVS TFLSDSIKRF NANAVSAINH DLRVIENFAD ERYHSSGLNE
701: IYKEGSFRSY LVEARQLINL LSSSQPENFM NPVIRERNYN TLDYKKVATI CEKFKDSADG IFGSLANRNT KLTAKKKSMD MLKKRLKEFN

Arabidopsis Description

SEC15AExocyst complex component [Source:UniProtKB/TrEMBL;Acc:A0A178V8H8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.