Factsheet for PGSC0003DMT400075539

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g096290.1.1	Tomato	cytosol	94.82	98.04
VIT_08s0040g00840.t01	Wine grape	cytosol	76.61	76.81
AT3G56640.1	Thale cress	cytosol	70.16	70.25
Bra007260.1-P	Field mustard	cytosol	66.37	70.19
CDX72119	Canola	cytosol	66.37	70.19
CDY56776	Canola	cytosol	66.37	70.19
KRH07372	Soybean	cytosol	69.41	69.67
KRH66189	Soybean	cytosol	69.15	69.42
KRH71637	Soybean	cytosol	67.76	67.93
KRH33282	Soybean	cytosol	67.13	67.3
GSMUA_AchrUn_...	Banana	cytosol	64.48	66.41
GSMUA_Achr9P18870_001	Banana	cytosol	60.56	64.12
CDY61690	Canola	cytosol	5.94	62.67
CDY05466	Canola	cytosol	5.94	62.67
EER92143	Sorghum	cytosol	61.31	61.39
GSMUA_Achr1P23270_001	Banana	cytosol	61.19	61.19
Zm00001d047268_P001	Maize	cytosol	60.94	61.01
Os10t0415200-02	Rice	cytosol	59.17	59.32
Os03t0163500-01	Rice	cytosol, plasma membrane	58.28	58.5
TraesCS2A01G448600.1	Wheat	cytosol	57.14	57.29
HORVU2Hr1G106010.2	Barley	cytosol	57.02	57.09
TraesCS2D01G447800.1	Wheat	cytosol	56.89	57.03
EER91624	Sorghum	cytosol	57.02	57.02
HORVU4Hr1G073920.1	Barley	cytosol	56.89	56.96
HORVU4Hr1G074030.1	Barley	cytosol	56.76	56.76
TraesCS4B01G279000.1	Wheat	cytosol	56.38	56.46
TraesCS2B01G469400.1	Wheat	cytosol	56.26	56.4
TraesCS4A01G025100.1	Wheat	cytosol	56.26	56.33
TraesCS4D01G277500.1	Wheat	cytosol	56.26	56.33
Zm00001d014179_P001	Maize	cytosol	55.88	56.09
Zm00001d034208_P001	Maize	cytosol	35.27	47.61
Zm00001d024189_P001	Maize	cytosol, golgi	21.62	35.7

Protein Annotations

Gene3D:1.10.357.30	Gene3D:1.20.58.670	EntrezGene:102585215	MapMan:22.6.3.7	ncoils:Coil	InterPro:EXOC6/Sec15
GO:GO:0000003	GO:GO:0000145	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0006810	GO:GO:0006887	GO:GO:0006904	GO:GO:0007154	GO:GO:0008150
GO:GO:0009653	GO:GO:0009846	GO:GO:0009856	GO:GO:0009860	GO:GO:0009875	GO:GO:0009987
GO:GO:0016043	GO:GO:0016049	GO:GO:0030154	GO:GO:0040007	GO:GO:0060321	UniProt:M1CVC4
PFAM:PF04091	EnsemblPlantsGene:PGSC0003DMG400029375	PGSC:PGSC0003DMG400029375	EnsemblPlants:PGSC0003DMT400075539	PIRSF:PIRSF025007	PANTHER:PTHR12702
PANTHER:PTHR12702:SF5	UniParc:UPI000296A383	RefSeq:XP_006342474.1	SEG:seg	:	:

Description

Sec15 [Source:PGSC_GENE;Acc:PGSC0003DMG400029375]

Coordinates

chr12:+:58010010..58014473

Molecular Weight (calculated)

89455.9 Da

IEP (calculated)

5.582

GRAVY (calculated)

-0.133

Length

791 amino acids

Sequence
(BLAST)

001: MTAKTRRRMA TENGDTTTAE DSVLVTMISN GEDLGPMVRL AFESGKPDAL LQQLKNVVKK KEVEIEELCK LHYEEFIIAV DELRGVLVDA EELKAELQTD
101: NLKLQDVGSV LLLKLEELLE SFSIKKNVTE AIKMSGNCVQ VLELCAKCNN HVSEGRFYPA IKAIDLIEKS YLQNIPVKPL RTMIEKRIPL IKLHIEKRVT
201: SEVNEWLVHI RSTAKDIGQT AIGYAASARQ RDEDMLARQR KAEEQSCLGL GDFTYTLDVE EINEESVLKF DLTPLYRACH IHGCMGIQEQ FREYYYKNRL
301: LQLSSDLQIS LSQPFLESHQ IFLAQIAGYF IVEDRVLRTA GGLLLPNQVE TMWETAVGKV TSLLEEQFSH MDSASHLLMV KDYVTLLGST LRQYGYEVSS
401: ILGTLNSSRE KYHELLLAEC RHQITAVVTN DTFEQMVMKR ESDYQANVLL FHLQTSDIMP AFPFIAPFSS MVPECCRIVK SFIKDSVNYL SYGSQMNFFD
501: FVKKYLDKLL IDVLNEVLLE TIYSGTTGVS QAMQIAANIA VFERACDFFL QHAAQQCGIP VRLVERPQGS LTAKIVLKTS RDAAYIALLS LVNAKLDEFM
601: SLTGNIHWTA DDAPQQGNEC MNEVVIYLDT LLSTAQQILP LDALYKVGIG ALEHISNSIV GTFLSDSIKR FNVNAVMSIN HDLKALESFA DERFHSTGLS
701: EVYKDDSFRS CLVEVRQLIN LLLSSQPENF MNPVIREKNY NALDYKKVST ICDKYKDSAD GLFGSLSSRN TKQSARKKSM DVLKKRLRDF N

Best Arabidopsis Sequence Match ( AT3G56640.1 )
(BLAST)

001: MMEAKPKRRI VTENGDTGED LVLATLIGNG DDVGPLVRHA FEMGRPEPLV HQLKNVARKK EAEIEDLCKT HYEEFIVAVD ELRGVLVDAE ELKSDLASDN
101: FRLQEVGSAL LVKLEELLES YAVKKNVTEA IKMSKICVQA LELCVKCNSY ISEGQFYHAL KTMDLIEKSY LKLIPLKVLK LVIERRIPVI KTHIEKKVCS
201: QFNEWLVHIR SSSKNIGQTA IGLTASARQR EEEMLERQRR AEEQNTGGLG ELAYTLDVED SEQDSVLKFD LTPLYRAYHI HTILGVPERF RDYYYENRLL
301: QLQSDLQITY TQPFVESYQT FLAQVAGYFI VEDRVIRTAG DFLLADQVET MWETAISKIV AILENQFARM DSPTHLLLVK DYVTLLGTTL RQYGYEVGPV
401: LDALDKSRDK YHELLLEECR KQIVTAITED TYQQMVIKKE ADYENNVLSF NLQTSDIMPA FTYIAPFSSM VPDVCRIIRS YIKGSVDYLS YGVNTNFFSV
501: LRKYLDKILI DVLNEVILET ISNNSIGVSQ AMQIAANISF LEKASDYFLR HAAQLCGIPS RSVERPQASL AAKVVLKTSR DAAYLALLNV VNTKLDEFMK
601: LTENVNWTTE EMPQGPHEYI NEVVIYLETV MSTAQQILPM DALYKVGVGA IEHISNSIVS TFLSDSIKRF NANAVSAINH DLRVIENFAD ERYHSSGLNE
701: IYKEGSFRSY LVEARQLINL LSSSQPENFM NPVIRERNYN TLDYKKVATI CEKFKDSADG IFGSLANRNT KLTAKKKSMD MLKKRLKEFN

Arabidopsis Description

SEC15AExocyst complex component [Source:UniProtKB/TrEMBL;Acc:A0A178V8H8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.