Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018558.1-P | Field mustard | cytosol | 86.66 | 85.68 |
| CDY65634 | Canola | cytosol | 83.61 | 85.68 |
| CDY50392 | Canola | cytosol | 83.35 | 85.53 |
| Bra036274.1-P | Field mustard | cytosol | 83.99 | 84.2 |
| VIT_07s0005g00680.t01 | Wine grape | cytosol | 75.73 | 74.31 |
| Solyc09g075280.1.1 | Tomato | nucleus | 74.21 | 72.64 |
| KRH68203 | Soybean | endoplasmic reticulum | 73.19 | 72.18 |
| KRH14016 | Soybean | mitochondrion | 73.7 | 70.99 |
| GSMUA_Achr3P24060_001 | Banana | cytosol | 59.72 | 61.2 |
| Os01t0351300-01 | Rice | plasma membrane | 57.43 | 56.5 |
| TraesCS3A01G199000.2 | Wheat | cytosol | 57.56 | 56.2 |
| TraesCS3B01G232000.1 | Wheat | cytosol | 57.43 | 56.08 |
| EES02923 | Sorghum | cytosol, mitochondrion | 57.56 | 55.93 |
| Zm00001d040788_P001 | Maize | cytosol, mitochondrion, plastid | 57.56 | 55.93 |
| Zm00001d009226_P001 | Maize | mitochondrion | 57.18 | 55.56 |
| GSMUA_Achr8P06600_001 | Banana | cytosol | 54.64 | 55.06 |
| HORVU0Hr1G006630.1 | Barley | cytosol | 57.56 | 53.48 |
| TraesCS3D01G205600.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane, plastid | 57.56 | 52.07 |
| AT3G56640.1 | Thale cress | cytosol | 47.9 | 47.72 |
Protein Annotations
| Gene3D:1.10.357.30 | Gene3D:1.20.58.670 | MapMan:22.6.3.7 | EntrezGene:828060 | ProteinID:AAC19268.1 | ProteinID:AEE82158.1 |
| ProteinID:ANM67295.1 | ArrayExpress:AT4G02350 | EnsemblPlantsGene:AT4G02350 | RefSeq:AT4G02350 | TAIR:AT4G02350 | RefSeq:AT4G02350-TAIR-G |
| EnsemblPlants:AT4G02350.1 | TAIR:AT4G02350.1 | Unigene:At.34308 | ProteinID:CAB80728.1 | ncoils:Coil | InterPro:EXOC6/Sec15 |
| UniProt:F4JHH5 | GO:GO:0000003 | GO:GO:0000145 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005615 | GO:GO:0005618 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005856 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0006887 |
| GO:GO:0006904 | GO:GO:0007154 | GO:GO:0008150 | GO:GO:0009506 | GO:GO:0009524 | GO:GO:0009653 |
| GO:GO:0009846 | GO:GO:0009856 | GO:GO:0009860 | GO:GO:0009875 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016043 | GO:GO:0016049 | GO:GO:0030154 | GO:GO:0030312 | GO:GO:0040007 | GO:GO:0060321 |
| GO:GO:0070062 | RefSeq:NP_001319844.1 | RefSeq:NP_567229.2 | PFAM:PF04091 | PIRSF:PIRSF025007 | PO:PO:0000005 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR12702 | PANTHER:PTHR12702:SF1 | Symbol:SEC15B | UniParc:UPI0001E92F25 |
| SEG:seg | : | : | : | : | : |
Description
SEC15BExocyst complex component SEC15B [Source:UniProtKB/Swiss-Prot;Acc:F4JHH5]
Coordinates
chr4:+:1038114..1041064
Molecular Weight (calculated)
88376.0 Da
IEP (calculated)
6.395
GRAVY (calculated)
-0.230
Length
787 amino acids
Sequence
(BLAST)
(BLAST)
001: MQSSKGRRKV GSTTAGAGID SAEKLDELLI SSAICNGEDL GPFVRKTFGT GKPETLLHHL KFFARSKESE IEEVCKAHYQ DFIHAVDDLK SLLSDVESLK
101: SALSDSNSKL QSVAAPLLSS LDSLVEAQTV SKNVDLAIGA VTHCVRVMEL VSRANQHLQS GNFYMALKCV DSIESDFMEK TPSSTLKRML ENRIPAIRSY
201: VERKVNKEFG DWLVEIRVVS RNLGQLAIGE ASAARQREEE LRIKQRQAEE QSRLSLRDCV YALNEEEDDE FGSGHEGSDG GSSGGGLLGF DLTPLYRAYH
301: IHQTLSLGDT FKQYYYNNRD LQLTSDFQIA GFFIVEDRVL RTGGGLISKL EVETLWDTAV TKMCAVLEDQ FSRMQTANHL LLIKDYVSLL GVSLRRYGYA
401: VDSLLEVLSK HRDKYHELLL SDCRKQITEA LSADKFEQML MKKEYEYSMN VLSFQLQTSE IVPAFPFIAP FSTTVPDCCR IVRSFIEDSV SFMSHGGQLD
501: FYDVVKKYLD RLLGEVLDEA LLKLISTSVH GVSQAMQVAA NMAVFERACD FFFRHAAHLS GVPLRMAERG RRHFPLTKSQ NTAEDTLSGM LKKKIDGFMT
601: LLENVNWTSD DIPQGGNEYM NEVLIYLETL VSTAQQILPA KVLKRVLRDV LAHISEKIVG TLCGDLVKRL SMAAIKGLDV DIQLLDSFTE NLTPLLTDKE
701: AREMKKAFVE IRQMINLLLS SHPENFVNPV IRERSYNALD YRKVATVSEK FRDPSDSIFG TFGTRGSRQN PKNKSLDALI KRLKDVS
101: SALSDSNSKL QSVAAPLLSS LDSLVEAQTV SKNVDLAIGA VTHCVRVMEL VSRANQHLQS GNFYMALKCV DSIESDFMEK TPSSTLKRML ENRIPAIRSY
201: VERKVNKEFG DWLVEIRVVS RNLGQLAIGE ASAARQREEE LRIKQRQAEE QSRLSLRDCV YALNEEEDDE FGSGHEGSDG GSSGGGLLGF DLTPLYRAYH
301: IHQTLSLGDT FKQYYYNNRD LQLTSDFQIA GFFIVEDRVL RTGGGLISKL EVETLWDTAV TKMCAVLEDQ FSRMQTANHL LLIKDYVSLL GVSLRRYGYA
401: VDSLLEVLSK HRDKYHELLL SDCRKQITEA LSADKFEQML MKKEYEYSMN VLSFQLQTSE IVPAFPFIAP FSTTVPDCCR IVRSFIEDSV SFMSHGGQLD
501: FYDVVKKYLD RLLGEVLDEA LLKLISTSVH GVSQAMQVAA NMAVFERACD FFFRHAAHLS GVPLRMAERG RRHFPLTKSQ NTAEDTLSGM LKKKIDGFMT
601: LLENVNWTSD DIPQGGNEYM NEVLIYLETL VSTAQQILPA KVLKRVLRDV LAHISEKIVG TLCGDLVKRL SMAAIKGLDV DIQLLDSFTE NLTPLLTDKE
701: AREMKKAFVE IRQMINLLLS SHPENFVNPV IRERSYNALD YRKVATVSEK FRDPSDSIFG TFGTRGSRQN PKNKSLDALI KRLKDVS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.