Factsheet for GSMUA_Achr8P06600_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr7P17130_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G02350.1	GSMUA_Achr7P17130_001	AT1G10180.1	23495664

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P24060_001	Banana	cytosol	81.69	83.07
VIT_07s0005g00680.t01	Wine grape	cytosol	61.72	60.1
Os01t0351300-01	Rice	plasma membrane	60.18	58.75
Zm00001d040788_P001	Maize	cytosol, mitochondrion, plastid	60.31	58.15
Solyc09g075280.1.1	Tomato	nucleus	59.67	57.96
EES02923	Sorghum	cytosol, mitochondrion	60.05	57.9
KRH68203	Soybean	endoplasmic reticulum	59.15	57.89
TraesCS3A01G199000.2	Wheat	cytosol	59.41	57.57
TraesCS3B01G232000.1	Wheat	cytosol	59.28	57.44
Zm00001d009226_P001	Maize	mitochondrion	59.41	57.28
KRH14016	Soybean	mitochondrion	59.41	56.79
Bra018558.1-P	Field mustard	cytosol	57.49	56.41
Bra036274.1-P	Field mustard	cytosol	56.08	55.8
HORVU0Hr1G006630.1	Barley	cytosol	59.28	54.66
AT4G02350.1	Thale cress	cytosol	55.06	54.64
CDY65634	Canola	cytosol	53.52	54.43
CDY50392	Canola	cytosol	53.27	54.24
TraesCS3D01G205600.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane, plastid	59.28	53.22
GSMUA_AchrUn_...	Banana	cytosol	46.35	47.14
GSMUA_Achr9P18870_001	Banana	cytosol	43.41	45.38
GSMUA_Achr1P23270_001	Banana	cytosol	43.15	42.6

Protein Annotations

Gene3D:1.10.357.30	Gene3D:1.20.58.670	MapMan:22.6.3.7	InterPro:EXOC6/Sec15	GO:GO:0000145	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0006904
GO:GO:0008150	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr8G06600_001	EnsemblPlants:GSMUA_Achr8P06600_001	EnsemblPlants:GSMUA_Achr8T06600_001	UniProt:M0TN63
PFAM:PF04091	PIRSF:PIRSF025007	PANTHER:PTHR12702	PANTHER:PTHR12702:SF1	UniParc:UPI000295DC40	SEG:seg

Description

Putative Probable exocyst complex component 6 [Source:GMGC_GENE;Acc:GSMUA_Achr8G06600_001]

Coordinates

chr8:-:4282028..4284580

Molecular Weight (calculated)

87682.5 Da

IEP (calculated)

6.665

GRAVY (calculated)

-0.085

Length

781 amino acids

Sequence
(BLAST)

001: MRRKVAPDSS AMAAVGGGEG ATEVEQAQLS TAIRNGEDLG PFVRRAFASG RPEALLSSLH HFARSKEVEI EDVCKAHYQD FMGAVDDLRS LLSDVDSLKS
101: ALADSTAAVQ STVGPLLAAL DAYLEARSVA DNLTAAIRAA RLCSRLFALL ARANEHLAAD RLYLALRAIA AAERDLLPAA PHPTIRRMLV SLIPAVHAHV
201: ERKIFEEFSD WMVQIRVASR HLGQIAIDRA SAARQRQAEK QGIRSGSTIT TSIFRDHPYS LRLEEEEEDD WSGDDSDDLA AALSDGEASI LDLIPLYRAH
301: HIHTTLGLEE RFRRYYFENR KLQLTSDFQV SSLTPFLESH QIFFAQIVGF FIVEDRILCT GGGLIAPPDV DALWEIAITK MVSVLEDQFS RMQTANHFLL
401: IKDYVSLLGV TLHRYCYSVD PLLDVLSKHR DKYHDLLLSD CRRQVSETLA ADKFEQMLMK TEFEYSKNVL SFQIQTSDIT PAFPYVASFS SSVPDLCVIC
501: RSFIKDSISF MSHGGQLDIY PIVKKYLERL LGEVVDGSIL HHIESRSLGV SQAMQVAANM VVLEQACNFL FRHAAQLSGI PLRIAEKVRR EFPLKKSRIA
601: TEELLLGLLR KKINDFMMLT DSISWMADSP PPILRRILQG VLTYISNTIM GLFLSDTVKR FNLNAVMGID VDLKRFESFA DDQSRLFTHS DDFVANELKL
701: ALLEARQLVN LLMCNNPENF LNPVITERSY NKLNYKKVIT VTEKFRESSD RLFGTFGTRG ARQNPKQKSL DALIKRLKDA S

Best Arabidopsis Sequence Match ( AT4G02350.2 )
(BLAST)

001: MQSSKGRRKV GSTTAGAGID SAEKLDELLI SSAICNGEDL GPFVRKTFGT GKPETLLHHL KFFARSKESE IEEVCKAHYQ DFIHAVDDLK SLLSDVESLK
101: SALSDSNSKL QSVAAPLLSS LDSLVEAQTV SKNVDLAIGA VTHCVRVMEL VSRANQHLQS GNFYMALKCV DSIESDFMEK TPSSTLKRML ENRIPAIRSY
201: VERKVNKEFG DWLVEIRVVS RNLGQLAIGE ASAARQREEE LRIKQRQAEE QSRLSLRDCV YALNEEEDDE FGSGHEGSDG GSSGGGLLGF DLTPLYRAYH
301: IHQTLSLGDT FKQYYYNNRD LQLTSDFQIA GFFIVEDRVL RTGGGLISKL EVETLWDTAV TKMCAVLEDQ FSRMQTANHL LLIKDYVSLL GVSLRRYGYA
401: VDSLLEVLSK HRDKYHELLL SDCRKQITEA LSADKFEQML MKKEYEYSMN VLSFQLQTSE IVPAFPFIAP FSTTVPDCCR IVRSFIEDSV SFMSHGGQLD
501: FYDVVKKYLD RLLGEVLDEA LLKLISTSVH GVSQAMQVAA NMAVFERACD FFFRHAAHLS GVPLRMAERG RRHFPLTKSQ NTAEDTLSGM LKKKIDGFMT
601: LLENVNWTSD DIPQGGNEYM NEVLIYLETL VSTAQQILPA KVLKRVLRDV LAHISEKIVG TLCGDLVKRL SMAAIKGLDV DIQLLDSFTE NLTPLLTDKE
701: AREMKKAFVE IRQMINLLLS SHPENFVNPV IRERSYNALD YRKVATVSEK FRDPSDSIFG TFGTRGSRQN PKNKSLDALI KRLKDVS

Arabidopsis Description

SEC15BExocyst complex component SEC15B [Source:UniProtKB/Swiss-Prot;Acc:F4JHH5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.