Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra018457.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G02350.1 | Bra018457.1-P | AT1G10180.1 | 23495664 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036274.1-P | Field mustard | cytosol | 88.19 | 89.43 |
| AT4G02350.1 | Thale cress | cytosol | 85.68 | 86.66 |
| VIT_07s0005g00680.t01 | Wine grape | cytosol | 77.26 | 76.68 |
| KRH68203 | Soybean | endoplasmic reticulum | 75.0 | 74.81 |
| Solyc09g075280.1.1 | Tomato | nucleus | 74.37 | 73.63 |
| KRH14016 | Soybean | mitochondrion | 75.5 | 73.56 |
| GSMUA_Achr3P24060_001 | Banana | cytosol | 61.56 | 63.8 |
| EES02923 | Sorghum | cytosol, mitochondrion | 60.18 | 59.14 |
| Os01t0351300-01 | Rice | plasma membrane | 59.42 | 59.12 |
| Zm00001d040788_P001 | Maize | cytosol, mitochondrion, plastid | 60.05 | 59.01 |
| Zm00001d009226_P001 | Maize | mitochondrion | 59.8 | 58.77 |
| TraesCS3A01G199000.2 | Wheat | cytosol | 59.3 | 58.56 |
| TraesCS3B01G232000.1 | Wheat | cytosol | 59.3 | 58.56 |
| GSMUA_Achr8P06600_001 | Banana | cytosol | 56.41 | 57.49 |
| HORVU0Hr1G006630.1 | Barley | cytosol | 59.92 | 56.32 |
| TraesCS3D01G205600.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane, plastid | 59.3 | 54.25 |
| Bra007260.1-P | Field mustard | cytosol | 45.48 | 48.4 |
Protein Annotations
| Gene3D:1.10.357.30 | Gene3D:1.20.58.670 | MapMan:22.6.3.7 | EnsemblPlantsGene:Bra018558 | EnsemblPlants:Bra018558.1 | EnsemblPlants:Bra018558.1-P |
| ncoils:Coil | InterPro:EXOC6/Sec15 | GO:GO:0000145 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006887 | GO:GO:0006904 | GO:GO:0008150 | GO:GO:0009987 |
| UniProt:M4DPW7 | PFAM:PF04091 | PIRSF:PIRSF025007 | PANTHER:PTHR12702 | PANTHER:PTHR12702:SF1 | UniParc:UPI0002547415 |
| SEG:seg | : | : | : | : | : |
Description
AT4G02350 (E=0.0) | exocyst complex subunit Sec15-like family protein
Coordinates
chrA05:-:9233703..9236093
Molecular Weight (calculated)
90061.0 Da
IEP (calculated)
6.201
GRAVY (calculated)
-0.273
Length
796 amino acids
Sequence
(BLAST)
(BLAST)
001: MHSPKPPRRK PGPTTAGADS GEKLDELLIS SAICNGEDLG PFVRKTFGTG KPETLLHHLK LFARSKESEI EEVCKAHYQD FIHAVDDLKS LLSDVDSLKS
101: SLSDSNSKLQ SIAAPLLSSL DSLVEAQTVS RNVDLAIRAV THCVRVMELV SRANHHLQSG SFYLALKCVD SIESDFLEKT QSSTLKRMLE KRIPQIRGYV
201: ERKVSKELGD WLVEIRVVSR NLGQLAIGEA SAARQREEEL RMKQKEAEEQ SRLSLRDCVY ALKEEEDDDD EYDSGLEGSD AFDLTPLYRA YHIHQTLSLE
301: DRFKRYYFDN RELQLKSDSQ VSSMTPFLES HQTFFAQIAG FFIVEDRVLR TGGGLISRQE VEFLWDLAVG NMCAVLEDQF SRMQTANHLL LIKDYVSLLG
401: VSLRRYGYTV DALLEVLSKH RDKYHELLLS DCRKQMIEAL AADKFEQMLM KKEYEYSMNV LSFQLQTSDI APAFPYIAPF STTVPDCCRI VRSFIEDSVS
501: FMSHGGQLDF YDVVKKYLDR LLGEVLDEAL LKLINTSVHG VSQAMQVAAN MSVFERACDF FFRHAAQLSG VPLRMAERGR RHFPLTKSQN AAEDTLSGLL
601: KNKIDGFMTL IENVNWTSDD VPQGGNEYMN ELIIYLETLV STAQQILPAK VLKRVLRDVL AHISERIVGT LCGDVVKRLS MAAIKGVDVD IQLLESFTEQ
701: LKPLLTDKEA KEMKTAFVEI RQLINLLLSS HPENFVNPVI RERSYNALDY RKVAAVSEKL RDPSDSIFGT FGTRGSRQNP KNKSLDTLIK RLKDVS
101: SLSDSNSKLQ SIAAPLLSSL DSLVEAQTVS RNVDLAIRAV THCVRVMELV SRANHHLQSG SFYLALKCVD SIESDFLEKT QSSTLKRMLE KRIPQIRGYV
201: ERKVSKELGD WLVEIRVVSR NLGQLAIGEA SAARQREEEL RMKQKEAEEQ SRLSLRDCVY ALKEEEDDDD EYDSGLEGSD AFDLTPLYRA YHIHQTLSLE
301: DRFKRYYFDN RELQLKSDSQ VSSMTPFLES HQTFFAQIAG FFIVEDRVLR TGGGLISRQE VEFLWDLAVG NMCAVLEDQF SRMQTANHLL LIKDYVSLLG
401: VSLRRYGYTV DALLEVLSKH RDKYHELLLS DCRKQMIEAL AADKFEQMLM KKEYEYSMNV LSFQLQTSDI APAFPYIAPF STTVPDCCRI VRSFIEDSVS
501: FMSHGGQLDF YDVVKKYLDR LLGEVLDEAL LKLINTSVHG VSQAMQVAAN MSVFERACDF FFRHAAQLSG VPLRMAERGR RHFPLTKSQN AAEDTLSGLL
601: KNKIDGFMTL IENVNWTSDD VPQGGNEYMN ELIIYLETLV STAQQILPAK VLKRVLRDVL AHISERIVGT LCGDVVKRLS MAAIKGVDVD IQLLESFTEQ
701: LKPLLTDKEA KEMKTAFVEI RQLINLLLSS HPENFVNPVI RERSYNALDY RKVAAVSEKL RDPSDSIFGT FGTRGSRQNP KNKSLDTLIK RLKDVS
001: MQSSKGRRKV GSTTAGAGID SAEKLDELLI SSAICNGEDL GPFVRKTFGT GKPETLLHHL KFFARSKESE IEEVCKAHYQ DFIHAVDDLK SLLSDVESLK
101: SALSDSNSKL QSVAAPLLSS LDSLVEAQTV SKNVDLAIGA VTHCVRVMEL VSRANQHLQS GNFYMALKCV DSIESDFMEK TPSSTLKRML ENRIPAIRSY
201: VERKVNKEFG DWLVEIRVVS RNLGQLAIGE ASAARQREEE LRIKQRQAEE QSRLSLRDCV YALNEEEDDE FGSGHEGSDG GSSGGGLLGF DLTPLYRAYH
301: IHQTLSLGDT FKQYYYNNRD LQLTSDFQIA GFFIVEDRVL RTGGGLISKL EVETLWDTAV TKMCAVLEDQ FSRMQTANHL LLIKDYVSLL GVSLRRYGYA
401: VDSLLEVLSK HRDKYHELLL SDCRKQITEA LSADKFEQML MKKEYEYSMN VLSFQLQTSE IVPAFPFIAP FSTTVPDCCR IVRSFIEDSV SFMSHGGQLD
501: FYDVVKKYLD RLLGEVLDEA LLKLISTSVH GVSQAMQVAA NMAVFERACD FFFRHAAHLS GVPLRMAERG RRHFPLTKSQ NTAEDTLSGM LKKKIDGFMT
601: LLENVNWTSD DIPQGGNEYM NEVLIYLETL VSTAQQILPA KVLKRVLRDV LAHISEKIVG TLCGDLVKRL SMAAIKGLDV DIQLLDSFTE NLTPLLTDKE
701: AREMKKAFVE IRQMINLLLS SHPENFVNPV IRERSYNALD YRKVATVSEK FRDPSDSIFG TFGTRGSRQN PKNKSLDALI KRLKDVS
101: SALSDSNSKL QSVAAPLLSS LDSLVEAQTV SKNVDLAIGA VTHCVRVMEL VSRANQHLQS GNFYMALKCV DSIESDFMEK TPSSTLKRML ENRIPAIRSY
201: VERKVNKEFG DWLVEIRVVS RNLGQLAIGE ASAARQREEE LRIKQRQAEE QSRLSLRDCV YALNEEEDDE FGSGHEGSDG GSSGGGLLGF DLTPLYRAYH
301: IHQTLSLGDT FKQYYYNNRD LQLTSDFQIA GFFIVEDRVL RTGGGLISKL EVETLWDTAV TKMCAVLEDQ FSRMQTANHL LLIKDYVSLL GVSLRRYGYA
401: VDSLLEVLSK HRDKYHELLL SDCRKQITEA LSADKFEQML MKKEYEYSMN VLSFQLQTSE IVPAFPFIAP FSTTVPDCCR IVRSFIEDSV SFMSHGGQLD
501: FYDVVKKYLD RLLGEVLDEA LLKLISTSVH GVSQAMQVAA NMAVFERACD FFFRHAAHLS GVPLRMAERG RRHFPLTKSQ NTAEDTLSGM LKKKIDGFMT
601: LLENVNWTSD DIPQGGNEYM NEVLIYLETL VSTAQQILPA KVLKRVLRDV LAHISEKIVG TLCGDLVKRL SMAAIKGLDV DIQLLDSFTE NLTPLLTDKE
701: AREMKKAFVE IRQMINLLLS SHPENFVNPV IRERSYNALD YRKVATVSEK FRDPSDSIFG TFGTRGSRQN PKNKSLDALI KRLKDVS
Arabidopsis Description
SEC15BExocyst complex component SEC15B [Source:UniProtKB/Swiss-Prot;Acc:F4JHH5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.