Factsheet for GSMUA_Achr7P17130_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0568000-01	Rice	nucleus	62.17	54.2
TraesCS2D01G208300.1	Wheat	cytosol	62.17	53.86
TraesCS2A01G200500.1	Wheat	nucleus	62.17	53.79
TraesCS2B01G227800.1	Wheat	cytosol	62.02	53.73
VIT_01s0011g01710.t01	Wine grape	cytosol	60.68	52.5
Zm00001d021828_P004	Maize	nucleus	61.57	52.2
HORVU2Hr1G039170.2	Barley	mitochondrion	62.02	50.67
Solyc02g069080.2.1	Tomato	nucleus	58.16	50.65
PGSC0003DMT400026847	Potato	nucleus	58.31	50.64
KRH50470	Soybean	cytosol	58.16	49.94
KRG89402	Soybean	cytosol	57.27	49.74
AT1G10180.1	Thale cress	cytosol	52.82	46.29
KXG36501	Sorghum	cytosol	61.28	46.15
CDY20653	Canola	cytosol	51.48	45.54
Bra018457.1-P	Field mustard	cytosol	52.08	45.12
CDY31043	Canola	cytosol	51.63	44.67
GSMUA_Achr2P12490_001	Banana	mitochondrion	28.34	24.55
GSMUA_Achr4P17210_001	Banana	mitochondrion	27.6	24.06
GSMUA_Achr7P17120_001	Banana	cytosol	0.59	3.31
GSMUA_Achr4P17220_001	Banana	extracellular	0.3	2.94

Protein Annotations

MapMan:22.6.3.8	ncoils:Coil	InterPro:Cullin_repeat-like_dom_sf	InterPro:Exo84	InterPro:Exo84_C	GO:GO:0000003
GO:GO:0000145	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810
GO:GO:0006887	GO:GO:0007154	GO:GO:0008150	GO:GO:0009856	GO:GO:0009875	GO:GO:0009987
GO:GO:0060321	EnsemblPlantsGene:GSMUA_Achr7G17130_001	EnsemblPlants:GSMUA_Achr7P17130_001	EnsemblPlants:GSMUA_Achr7T17130_001	UniProt:M0TIA0	PFAM:PF16528
PANTHER:PTHR21426	PANTHER:PTHR21426:SF2	SUPFAM:SSF74788	UniParc:UPI000295EE4B	SEG:seg	:

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G17130_001]

Coordinates

chr7:-:18599303..18609616

Molecular Weight (calculated)

76202.4 Da

IEP (calculated)

4.507

GRAVY (calculated)

-0.115

Length

674 amino acids

Sequence
(BLAST)

001: MESSEDDDDF PTHEWITPQS SINSIYQSHT EKGIRKVCSE LLELKDAVEN LSGNMQSKYL AFLRLSEEVI EMEQELMELQ KHVSAQGILV QDLMSGVCRE
101: LEVWNKCNSE EPDSEEELTE INRLLHNDLE DPKITFLDTI DVLLAEHKVE EALLAIITEE SNSPELHDLE GNPSADGSSY RLAFLKKKEM LVDQIVRIAE
201: QPYICTAELR KAVSGLAKLG KSSLALKLML NAYDSRLQKN IEAFLPSCSI YSETYTAILS QLVFSTISVA TKESTLIVGD MSTYMNRIVQ WAEDEIESFV
301: HLVKENSPSP ETAAALRSAS VCSQASLSHC SLLESQGLKF SKLIMVLLHP YIDEVLDMNF RRARRRIIDL TRNENVALMS SQLDSLLSVT TPSNIIFSSI
401: GKKFMSIVED ILDKLTPMVV LHFGRTILSK LLQLFDKYVE LLIKALPGPS EDDNLIEQRE SEDYRAETDA EQLGLLGTAY TVALELLPMA VSKIITPQIE
501: NKEVGGGSSE SISIVAVSSV EYKDWRRQLQ HSLEKLRDHF CRQYVLTFIY SREGKARLDA RMYLEGKGDD LFWDSDPLPS LPFQALFARL QQLASVAGDV
601: LLGKEKIQKI LLSRLTETVV MWLSEEQEFW DVFKDDSAQL QPLGLQQACL FSRAIVFYGF YELLILNIIS HSFS

Best Arabidopsis Sequence Match ( AT1G10180.1 )
(BLAST)

001: MESSEEDDEY PFIESITPQS KIDSVHQSLT EKGIRKLCCE LMDLKDAVEN MCGDMRTKYL AFLRISEEAV EMEHELVELR KHISSQGILV QDLMAGVCRE
101: MDDWNRLPGD VHDAEVEEDP LPNEVTDPKS EFLEKIDLLL AEHKVDEALE AMDAEERSSP DLKGSVEMSS YKSAFMERKA VLEDQLLRIA KQPSICVAEL
201: KHALIGLIRL GKGPSAHQLL LKFYATSLRR RIEAFLPSCL TCPNTFPATL SKLVFSNISV ATKESAAMFG DDDNPAYSNK VVQWAEREVE YLVRLVKENA
301: SPSETASALR AASICLQDCL NYCKVLEPQG LFLSKLFLVL FRPYVEEVLE LNFRRARRVI FDLNETDEGL ESPSDFVTIL SEFAIASDTM MTDCSIRFMQ
401: IVQDILEQLT HLVVLHFGES VLTRILQLYD KYIDFLIKAL PGHSDEDGLP ELQDNTVLAR AETDSEQLAL LGAAFTILDE LLPRSLVKVW KLQIENGGGE
501: GENSAALNSS AAPELKEWKR HMVQAFDKLR NYFCLQFVLS FIYSREGLTR LDALIYLTET PDDLHLPSLP FQALFSKLQQ LAIIAGDVLL GKEKLQKILL
601: ARLTETVIIW LSNEQEFWSA FEDESNPLQP SGLQQLILDM NFTVEIARFA GYPFKVVQNH ASVVINRAIN IFSERGINPQ SSLPKTEWFT EAAKSAINRL
701: LMGSEDASEP EEYECEEEEE DDHHIVLPEM DDDSDSEDTS SLSTVDSFES FASASMADLE SPSFTDSES

Arabidopsis Description

EXO84CExocyst complex component EXO84C [Source:UniProtKB/Swiss-Prot;Acc:Q9SY60]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.