Factsheet for GSMUA_Achr4P17220_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 3
cytosol 1
extracellular 2
mitochondrion 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	extracellular
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P17120_001	Banana	cytosol	14.71	8.26
GSMUA_Achr4P17210_001	Banana	mitochondrion	75.0	6.6
GSMUA_Achr2P12490_001	Banana	mitochondrion	60.29	5.27
VIT_01s0026g01230.t01	Wine grape	cytosol	32.35	3.19
AT1G10385.1	Thale cress	nucleus	35.29	3.18
Bra018442.1-P	Field mustard	cytosol	35.29	3.17
CDY20634	Canola	cytosol	35.29	3.17
CDY20945	Canola	cytosol	35.29	3.17
KRH69407	Soybean	nucleus, plastid	29.41	2.67
Solyc04g005850.1.1	Tomato	cytosol	29.41	2.65
KRH74737	Soybean	cytosol, plastid	26.47	2.4
PGSC0003DMT400007390	Potato	cytosol	2.94	0.77
GSMUA_Achr7P17130_001	Banana	nucleus	2.94	0.3

Protein Annotations

EnsemblPlants:GSMUA_Achr4P17220_001	EnsemblPlants:GSMUA_Achr4T17220_001	EnsemblPlantsGene:GSMUA_Achr4G17220_001	GO:GO:0000145	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150	GO:GO:0009987
InterPro:Exo84	PANTHER:PTHR21426	PANTHER:PTHR21426:SF14	UniParc:UPI0002957FEF	UniProt:M0SPN5	MapMan:35.2

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G17220_001]

Coordinates

chr4:+:16565821..16566027

Molecular Weight (calculated)

7443.6 Da

IEP (calculated)

9.806

GRAVY (calculated)

-0.332

Length

68 amino acids

Sequence
(BLAST)

1: MRLRIFQTSI CASFSVLPSD AWFFDVAQET ISRISGKARF GNRERESDSP TASISAQSTS SVRSHGSS

Best Arabidopsis Sequence Match ( AT5G49830.1 )
(BLAST)

001: MAAKTARSKA TPTKENGVRV EEGLSLFKSD KFDADAYVQS KCSINEKDIK QLCSYLLDLK RASAEEMRRS VYANYPAFIR TSKEISDLEG ELSSIRNLLS
101: TQATLIHGLA DGVNIDDDKV SDESLANGLL NFEDNGLSDL EKWATEFPDH LDALLAERRV DEALAAFDEG EILVSQANEK HTLSSSVLSS LQFAIAERKQ
201: KLADQLAKAA CQPSTRGGEL RSAIAALKRL GDGPRAHTVL LDAHFQRYQY NMQSLRPSST SYGGAYTAAL SQLVFSAISQ ASSDSLGIFG KEPAYSSELV
301: TWATKQTEAF SLLVKRHALA SSAAAGGLRA AAECAQIALG HCSLLEARGL SLCPVLLKHF KPIVEQALEA NLKRIEENTA AMAAADDWVL TSPPAGSRHA
401: STAFQNKLTS SAHRFNLMVQ DFFEDVGPLL SMQLGSKALE GLFRVFNSYV DVLVRALPGS IEEEDPNFES SCNKIVQMAE TEANQLALLA NASLLADELL
501: PRAAMKLSLD QTGQRTDDLR RPLDRQNRNP EQREWKRRLL STVDKLKDAF CRQHALDLIF TEEGDSHLSA DMYVNIDENG EDVDFFPSLI FQELFAKLNR
601: MASLAADMFV GRERFAISLL MRLTETVILW LSGDQSFWDD IEEGPRPLGP LGLRQLYLDM KFVICFASQG RYLSRNLHRG TNEIISKALA AFTATGIDPY
701: SELPEDDWFN DICVDAMERL SGKTKGNNGD VHSPTASVSA QSVSSARSHG SY

Arabidopsis Description

EXO84BExocyst complex component 84B [Source:UniProtKB/TrEMBL;Acc:F4K7F5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.