Factsheet for VIT_01s0026g01230.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G052050.2	Barley	cytosol	61.25	61.79
VIT_09s0018g01920.t01	Wine grape	nucleus	67.34	60.34
AT1G10385.1	Thale cress	nucleus	64.01	58.49
KRH74737	Soybean	cytosol, plastid	63.28	58.13
Bra018442.1-P	Field mustard	cytosol	63.72	58.07
CDY20945	Canola	cytosol	63.72	58.07
CDY20634	Canola	cytosol	63.57	57.94
Solyc04g005850.1.1	Tomato	cytosol	63.13	57.54
KRH69407	Soybean	nucleus, plastid	62.26	57.2
PGSC0003DMT400007390	Potato	cytosol	21.48	56.7
Os07t0200000-01	Rice	plasma membrane	64.59	56.47
Zm00001d019104_P001	Maize	mitochondrion	64.01	56.47
GSMUA_Achr2P12490_001	Banana	mitochondrion	63.43	56.17
EER96033	Sorghum	mitochondrion, plastid	63.86	56.12
TraesCS2A01G244100.1	Wheat	mitochondrion, plastid	63.13	55.84
Zm00001d007760_P001	Maize	mitochondrion, plastid	62.99	55.78
TraesCS2B01G263000.1	Wheat	mitochondrion, plastid	62.99	55.57
TraesCS2D01G242400.3	Wheat	mitochondrion, plastid	63.13	55.56
GSMUA_Achr4P17210_001	Banana	mitochondrion	62.12	55.37
OQU90803	Sorghum	mitochondrion, plastid	61.68	54.77
Zm00001d013049_P002	Maize	plastid	60.67	53.94
TraesCS5B01G462100.1	Wheat	mitochondrion	60.81	53.65
HORVU5Hr1G109160.2	Barley	mitochondrion	60.23	53.55
TraesCS5A01G453100.1	Wheat	mitochondrion	60.52	53.39
TraesCS5D01G463900.1	Wheat	mitochondrion	60.81	51.6
Os03t0804400-01	Rice	cytosol, mitochondrion, nucleus	46.88	50.39
Zm00001d035209_P001	Maize	extracellular, nucleus, peroxisome	16.84	36.02
HORVU2Hr1G099060.1	Barley	cytosol	4.06	32.94
GSMUA_Achr4P17220_001	Banana	extracellular	3.19	32.35
VIT_01s0011g01710.t01	Wine grape	cytosol	28.16	24.9
GSMUA_Achr7P17120_001	Banana	cytosol	0.73	4.13

Protein Annotations

EntrezGene:100265642	wikigene:100265642	MapMan:22.6.3.8	EMBL:AM427940	ProteinID:CAN69091	ProteinID:CAN69091.1
ProteinID:CCB56605	ProteinID:CCB56605.1	InterPro:Cullin_repeat-like_dom_sf	InterPro:Exo84	InterPro:Exo84_C	UniProt:F6HPH7
EMBL:FN596002	GO:GO:0000145	GO:GO:0001927	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043
GO:GO:0051601	EntrezGene:LOC100265642	wikigene:LOC100265642	PFAM:PF08700	PFAM:PF16528	PANTHER:PTHR21426
PANTHER:PTHR21426:SF15	SUPFAM:SSF74788	UniParc:UPI000210829A	ArrayExpress:VIT_01s0026g01230	EnsemblPlantsGene:VIT_01s0026g01230	EnsemblPlants:VIT_01s0026g01230.t01
RefSeq:XP_002268561	RefSeq:XP_002268561.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr1:-:10246455..10250001

Molecular Weight (calculated)

75857.4 Da

IEP (calculated)

5.476

GRAVY (calculated)

-0.111

Length

689 amino acids

Sequence
(BLAST)

001: MRKSVYANYS AFIRTSKEIS DLEGELLSMR NLLSTQAALV HGLAEGVGVD SLSADSDSST KEDTSDVTHR EPTDMEKWLI DFVENLDVLL AERRVDESLT
101: VLDEGERTAQ EASNRQTLSP SVFLYLQAAI KEGRQKLADQ LAHVACQTST SGLELRSTVQ ALKKLGDGPH AHKLLLNSHH HNLVNNMRIR PSSTSYGGAF
201: TAALSHHVFS IIAQAANDSL SVFGDEPAYA SELVTWAVKE TKTFALLVKR HVLATSAAAG GLRLAAECVQ TCLGHCSLLE ARGLALSPIL LKLFRPCIEE
301: ALTTNLKRIE QSSSALAVVD DWTLVLPPAG IRPLGAWTSS LGSAIASQLK LSTSAHRFNS MVQEFFEEVG PLESLQLGGS TLEGLLQVFN SYINLLIHAL
401: PGTMETEDNL GGSGHKIVRM AETESQQLAL LANASMLADE LLPRGAMKLS PLHQTGRMDT PGRVSDRQNR FPEHREWKRK LQRAVDRLRD SFCRQHALEL
501: IFTEDGEIRL TAEIYTSMDG STNEPEWFPS PIFQEFFAKL TQIASIATDM FVGRERFATI LLMRLTETVI LWLSDDQSFW GEIEAGPKPL STFGLQQFYL
601: DMEFVILFSS QGRYLSRHLH QVIKNIIARA IDAFAAATGT DPYSVLPEDQ WFAEVAQIAM KMLTGEANFG NVDHDATSPT ASILSHGST

Best Arabidopsis Sequence Match ( AT1G10385.1 )
(BLAST)

001: MEARERGSMS SSIGNSAELE GNLTLSDRLK VFKGSTFDPD AYVTSKCQRM NEKETRHLSS YLVELKKASA EEMRKSVYAN YAAFIRTSKE ISALEGQLLS
101: MRNLLSAQAA LVHGLADGVH ISSLCADDAD DLRDEDLYDM DNKQLSNIEN WVVEFFDRLE VLLAEKRVEE SMAALEEGRR VAVEAHEKRT LSPTTLLSLN
201: NAIKEKRQEL ADQLAEAISQ PSTRGGELRS AVLSLKKLGD GSRAHTLLLR SYERRLQANI QSLRASNTSY GVAFAAALSQ LVFSTIAQAA SDSQAVVGED
301: PAYTSELVTW AVKQAESFAL LLKRHTLASS AAAGSLRVTA ECVQLCASHC SSLESRGLAL SPVLLKHFRP GVEQALTGNL KRIEQSSAAL AASDDWSLSY
401: TPTGSRASST TPTAPHLKLS ISAQRFNSMV QEFLEDAGPL DEALQLDGIA LDGVLQVFNS YVDLLINALP GSAENEENPV HRIVKVAETE SQQTALLVNA
501: LLLADELIPR SASRILPQGT SQSTPRRGSS DRQNRPEQRE WKKKLQRSVD RLRDSFCRQH ALELIFTEEG EVRLSSEIYI LMDETTEEPE WFPSPIFQEL
601: FAKLTRIAMI VSDMFVGRER FATILLMRLT ETVILWISDD QSFWEEMETG DKPLGPLGLQ QFYLDMEFVM IFASQGRYLS RNLHQVIKNI IARAVEAVSA
701: TGLDPYSTLP EEEWFAEVAQ IAIKMLMGKG NFGGHGERDV TSPSVSSAKS YTSN

Arabidopsis Description

EXO84AExocyst complex component EXO84A [Source:UniProtKB/Swiss-Prot;Acc:F4I4B6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.