Factsheet for Solyc04g005850.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400007390	Potato	cytosol	31.22	90.42
VIT_01s0026g01230.t01	Wine grape	cytosol	57.54	63.13
CDY20634	Canola	cytosol	60.05	60.05
AT1G10385.1	Thale cress	nucleus	59.79	59.95
CDY20945	Canola	cytosol	59.79	59.79
Bra018442.1-P	Field mustard	cytosol	59.52	59.52
KRH69407	Soybean	nucleus, plastid	58.07	58.53
KRH74737	Soybean	cytosol, plastid	57.54	58.0
HORVU2Hr1G052050.2	Barley	cytosol	51.45	56.95
Zm00001d019104_P001	Maize	mitochondrion	58.6	56.72
GSMUA_Achr4P17210_001	Banana	mitochondrion	57.94	56.66
EER96033	Sorghum	mitochondrion, plastid	58.73	56.63
GSMUA_Achr2P12490_001	Banana	mitochondrion	58.07	56.43
Zm00001d007760_P001	Maize	mitochondrion, plastid	57.94	56.3
TraesCS2A01G244100.1	Wheat	mitochondrion, plastid	57.8	56.1
Os07t0200000-01	Rice	plasma membrane	58.33	55.96
Solyc03g123870.2.1	Tomato	nucleus	57.14	55.96
TraesCS2B01G263000.1	Wheat	mitochondrion, plastid	57.67	55.83
TraesCS2D01G242400.3	Wheat	mitochondrion, plastid	57.8	55.81
HORVU5Hr1G109160.2	Barley	mitochondrion	56.35	54.97
TraesCS5B01G462100.1	Wheat	mitochondrion	56.75	54.93
OQU90803	Sorghum	mitochondrion, plastid	56.35	54.9
TraesCS5A01G453100.1	Wheat	mitochondrion	56.35	54.55
Zm00001d013049_P002	Maize	plastid	55.69	54.32
TraesCS5D01G463900.1	Wheat	mitochondrion	56.22	52.34
Os03t0804400-01	Rice	cytosol, mitochondrion, nucleus	44.05	51.95
HORVU2Hr1G099060.1	Barley	cytosol	5.69	50.59
Zm00001d035209_P001	Maize	extracellular, nucleus, peroxisome	15.21	35.71
GSMUA_Achr4P17220_001	Banana	extracellular	2.65	29.41
Solyc02g069080.2.1	Tomato	nucleus	23.81	23.26
Solyc09g072720.1.1	Tomato	cytosol, nucleus, plastid	21.3	21.3
GSMUA_Achr7P17120_001	Banana	cytosol	0.26	1.65

Protein Annotations

MapMan:22.6.3.8	InterPro:Cullin_repeat-like_dom_sf	InterPro:Exo84	InterPro:Exo84_C	GO:GO:0000145	GO:GO:0001927
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006887
GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	GO:GO:0051601	UniProt:K4BNJ1	PFAM:PF08700
PFAM:PF16528	PANTHER:PTHR21426	PANTHER:PTHR21426:SF15	SUPFAM:SSF74788	EnsemblPlantsGene:Solyc04g005850.1	EnsemblPlants:Solyc04g005850.1.1
UniParc:UPI00027665E6	SEG:seg	:	:	:	:

Description

Exocyst complex component EXO84A [Source:Projected from Arabidopsis thaliana (AT1G10385) UniProtKB/Swiss-Prot;Acc:F4I4B6]

Coordinates

chr4:+:542180..545744

Molecular Weight (calculated)

83467.1 Da

IEP (calculated)

4.906

GRAVY (calculated)

-0.223

Length

756 amino acids

Sequence
(BLAST)

001: MDGGSFSSSI GDSIDFDEKD LSLSDKLKVF KASAYDPDSY VTNRCRQMSE KEIRHLCHYL MDLRKASAEE MRKSVYANYA AFIRTSREIS NLEGQLIALR
101: NLLSTRAAIV HGLAEGINVD SLASSDGSTQ DDRSNNGDND SINTESWLGQ FIEKLEVLLA ERRVDEVLDV LDEGEHMAND THNKQTLTPS ALLSLQKVIT
201: EQKQKLAAQL AEASFKSSVG GAELRSAVQA LKRLGDGPRA HTLMLSSHQQ KLHGNMQGIR PSGTSHGVAY SASLSQLVFS TMAQATSDSL SLFDDEPSYT
301: SELVTWAVNQ TENFAHLIKR YVIASPAASG CLRPVAESVH ISLGHCSLLE ARGLALSPIL LKNFKPCVEQ ALYANIKRIE QCTAALAAAD DWSLTYPPIG
401: SRSLGTSSLA GVIASQPKLS SSAHKFNTMV QELCEDISPL EILQLSENTL EGVMQVFNSY IGMLVKALPG SVDNENLEGS VNRIVRLAET EPQQIALLAN
501: AILLSDELIP RAAAKLSSAQ QSNKTDDTSK RSTDRQSRPI EQRELKRRLQ RLVDQLRDSF CRQHALELIF LEDGGVRLSP DMYLNMEGSP EEIEWFPSPV
601: YQEMFEKLTR IASIASDMFV GRERFATILL MRLTETIILW LSEDQNFWEE IEQGPKPLGP LGLQQFYLDM EFVILFASQG RYLSRNLQQV IKNIIGRAIE
701: AVAASHIDPY SVLPEDDWFA EVAQIAIDML TGKTQVGAME NVNSPTASSV LSHGSN

Best Arabidopsis Sequence Match ( AT1G10385.1 )
(BLAST)

001: MEARERGSMS SSIGNSAELE GNLTLSDRLK VFKGSTFDPD AYVTSKCQRM NEKETRHLSS YLVELKKASA EEMRKSVYAN YAAFIRTSKE ISALEGQLLS
101: MRNLLSAQAA LVHGLADGVH ISSLCADDAD DLRDEDLYDM DNKQLSNIEN WVVEFFDRLE VLLAEKRVEE SMAALEEGRR VAVEAHEKRT LSPTTLLSLN
201: NAIKEKRQEL ADQLAEAISQ PSTRGGELRS AVLSLKKLGD GSRAHTLLLR SYERRLQANI QSLRASNTSY GVAFAAALSQ LVFSTIAQAA SDSQAVVGED
301: PAYTSELVTW AVKQAESFAL LLKRHTLASS AAAGSLRVTA ECVQLCASHC SSLESRGLAL SPVLLKHFRP GVEQALTGNL KRIEQSSAAL AASDDWSLSY
401: TPTGSRASST TPTAPHLKLS ISAQRFNSMV QEFLEDAGPL DEALQLDGIA LDGVLQVFNS YVDLLINALP GSAENEENPV HRIVKVAETE SQQTALLVNA
501: LLLADELIPR SASRILPQGT SQSTPRRGSS DRQNRPEQRE WKKKLQRSVD RLRDSFCRQH ALELIFTEEG EVRLSSEIYI LMDETTEEPE WFPSPIFQEL
601: FAKLTRIAMI VSDMFVGRER FATILLMRLT ETVILWISDD QSFWEEMETG DKPLGPLGLQ QFYLDMEFVM IFASQGRYLS RNLHQVIKNI IARAVEAVSA
701: TGLDPYSTLP EEEWFAEVAQ IAIKMLMGKG NFGGHGERDV TSPSVSSAKS YTSN

Arabidopsis Description

EXO84AExocyst complex component EXO84A [Source:UniProtKB/Swiss-Prot;Acc:F4I4B6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.