CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
nucleus 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH69407	Soybean	nucleus, plastid	94.67	94.67
VIT_01s0026g01230.t01	Wine grape	cytosol	58.13	63.28
CDY20634	Canola	cytosol	63.33	62.83
AT1G10385.1	Thale cress	nucleus	62.93	62.6
Bra018442.1-P	Field mustard	cytosol	63.07	62.57
CDY20945	Canola	cytosol	62.8	62.3
Solyc04g005850.1.1	Tomato	cytosol	58.0	57.54
KRH47011	Soybean	cytosol	57.33	55.92
OQU90803	Sorghum	mitochondrion, plastid	57.07	55.15
GSMUA_Achr4P17210_001	Banana	mitochondrion	56.53	54.85
Os07t0200000-01	Rice	plasma membrane	57.6	54.82
Zm00001d013049_P002	Maize	plastid	56.53	54.71
Zm00001d019104_P001	Maize	mitochondrion	56.8	54.55
GSMUA_Achr2P12490_001	Banana	mitochondrion	56.53	54.5
Zm00001d007760_P001	Maize	mitochondrion, plastid	56.53	54.5
HORVU2Hr1G052050.2	Barley	cytosol	49.6	54.47
EER96033	Sorghum	mitochondrion, plastid	56.8	54.34
TraesCS2A01G244100.1	Wheat	mitochondrion, plastid	56.13	54.04
TraesCS2B01G263000.1	Wheat	mitochondrion, plastid	56.27	54.03
TraesCS2D01G242400.3	Wheat	mitochondrion, plastid	56.4	54.02
TraesCS5A01G453100.1	Wheat	mitochondrion	55.73	53.52
HORVU5Hr1G109160.2	Barley	mitochondrion	55.2	53.42
TraesCS5B01G462100.1	Wheat	mitochondrion	55.6	53.39
PGSC0003DMT400007390	Potato	cytosol	18.53	53.26
TraesCS5D01G463900.1	Wheat	mitochondrion	55.2	50.99
Os03t0804400-01	Rice	cytosol, mitochondrion, nucleus	42.67	49.92
KRH44640	Soybean	mitochondrion	56.8	49.65
HORVU2Hr1G099060.1	Barley	cytosol	5.6	49.41
Zm00001d035209_P001	Maize	extracellular, nucleus, peroxisome	15.6	36.34
GSMUA_Achr4P17220_001	Banana	extracellular	2.4	26.47
KRG89402	Soybean	cytosol	24.8	23.97
KRH50470	Soybean	cytosol	24.67	23.57
KRH19603	Soybean	cytosol	23.2	20.0
KRH32230	Soybean	cytosol	22.8	19.39
GSMUA_Achr7P17120_001	Banana	cytosol	0.4	2.48

Protein Annotations

EntrezGene:100787854	MapMan:22.6.3.8	EMBL:ACUP02000066	ncoils:Coil	InterPro:Cullin_repeat-like_dom_sf	InterPro:Exo84
InterPro:Exo84_C	EnsemblPlantsGene:GLYMA_01G039700	GO:GO:0000145	GO:GO:0001927	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150	GO:GO:0009987
GO:GO:0016043	GO:GO:0051601	UniProt:K7K1P3	EnsemblPlants:KRH74737	ProteinID:KRH74737	ProteinID:KRH74737.1
PFAM:PF08700	PFAM:PF16528	PANTHER:PTHR21426	PANTHER:PTHR21426:SF15	SUPFAM:SSF74788	UniParc:UPI00023BB424
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:4304713..4310259

Molecular Weight (calculated)

82793.7 Da

IEP (calculated)

4.811

GRAVY (calculated)

-0.131

Length

750 amino acids

Sequence
(BLAST)

001: MDQSPFLAQR GSVSSSLGNS AELDANLTLS DKLKVFKSST FDPNNYVASK SRSMNEKEIR HLCAYLVDLK KASAEEMRKS VLANYSAFIR TSKEISDLEG
101: ELLSMRNLLN TQAALVHGLA EGCMLSSMIS GNEDSDMDDL LAEKTDISNT EKWLIGYLET LEVLLAEKRV DEAMTALDEG EKMAKEISEG KTLSPSLFQA
201: LQDAINEHRK KLADQLAETI CQPSTHSAEI RSTALALKNL GDGPRAHTLL LNSHQETLQR NMKNLQSSNS GGVGAFTATL SQLVFSTISQ AASDSLSVFA
301: EEEPAYTSEL VTWAVTQAEK YAVLLKKCIL ASTAAAGGLR VASECVHVCM SHCYQLEASG LALSPILIKY FRPFVKQALN TNLRRIEQSS SALAAADDWF
401: LAYAPTSSRH SGLPPSSSHS NLSFQPKLSR SAHKFNSMVQ ELFEDVGPLE ILQLDVLAVE GLLQVFNFYV NLLINALPGS VVTENLEGHK IVKIAETEEQ
501: QIALLANAML LADELLPRAV IKLSNSTRGD DSHRRGSDKQ RELKKRLQRE VDRLRDSFCR QHALELIFTE EGEARLNALI YLGMDGNVEQ PEWFPSPIFQ
601: EIFAKLTDVA SIAADLFVGR ERFATVLLMR LAETVILWLS DDQTFWEEVE TGSTPLGPIG LQQLYLDMQF VMIFSSQGRY LSRHLHQAIK NIIERAINAV
701: AATGLDPNSV LPEDEWFVEV CEIAIKMLTG RAAFDNVEDD VASPTSSVQT

Best Arabidopsis Sequence Match ( AT1G10385.1 )
(BLAST)

001: MEARERGSMS SSIGNSAELE GNLTLSDRLK VFKGSTFDPD AYVTSKCQRM NEKETRHLSS YLVELKKASA EEMRKSVYAN YAAFIRTSKE ISALEGQLLS
101: MRNLLSAQAA LVHGLADGVH ISSLCADDAD DLRDEDLYDM DNKQLSNIEN WVVEFFDRLE VLLAEKRVEE SMAALEEGRR VAVEAHEKRT LSPTTLLSLN
201: NAIKEKRQEL ADQLAEAISQ PSTRGGELRS AVLSLKKLGD GSRAHTLLLR SYERRLQANI QSLRASNTSY GVAFAAALSQ LVFSTIAQAA SDSQAVVGED
301: PAYTSELVTW AVKQAESFAL LLKRHTLASS AAAGSLRVTA ECVQLCASHC SSLESRGLAL SPVLLKHFRP GVEQALTGNL KRIEQSSAAL AASDDWSLSY
401: TPTGSRASST TPTAPHLKLS ISAQRFNSMV QEFLEDAGPL DEALQLDGIA LDGVLQVFNS YVDLLINALP GSAENEENPV HRIVKVAETE SQQTALLVNA
501: LLLADELIPR SASRILPQGT SQSTPRRGSS DRQNRPEQRE WKKKLQRSVD RLRDSFCRQH ALELIFTEEG EVRLSSEIYI LMDETTEEPE WFPSPIFQEL
601: FAKLTRIAMI VSDMFVGRER FATILLMRLT ETVILWISDD QSFWEEMETG DKPLGPLGLQ QFYLDMEFVM IFASQGRYLS RNLHQVIKNI IARAVEAVSA
701: TGLDPYSTLP EEEWFAEVAQ IAIKMLMGKG NFGGHGERDV TSPSVSSAKS YTSN

Arabidopsis Description

EXO84AExocyst complex component EXO84A [Source:UniProtKB/Swiss-Prot;Acc:F4I4B6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.