CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY20945	Canola	cytosol	98.15	98.15
AT1G10385.1	Thale cress	nucleus	93.12	93.37
VIT_01s0026g01230.t01	Wine grape	cytosol	57.94	63.57
KRH74737	Soybean	cytosol, plastid	62.83	63.33
KRH69407	Soybean	nucleus, plastid	62.57	63.07
Solyc04g005850.1.1	Tomato	cytosol	60.05	60.05
GSMUA_Achr2P12490_001	Banana	mitochondrion	59.52	57.84
GSMUA_Achr4P17210_001	Banana	mitochondrion	58.86	57.57
CDY66364	Canola	cytosol	52.51	57.2
PGSC0003DMT400007390	Potato	cytosol	19.71	57.09
CDY61243	Canola	cytosol	43.65	56.99
EER96033	Sorghum	mitochondrion, plastid	58.2	56.12
Zm00001d019104_P001	Maize	mitochondrion	57.94	56.08
HORVU2Hr1G052050.2	Barley	cytosol	50.53	55.93
Zm00001d007760_P001	Maize	mitochondrion, plastid	57.54	55.91
Os07t0200000-01	Rice	plasma membrane	57.94	55.58
CDY66165	Canola	cytosol	9.26	55.56
Zm00001d013049_P002	Maize	plastid	56.88	55.48
TraesCS2A01G244100.1	Wheat	mitochondrion, plastid	57.01	55.33
TraesCS2B01G263000.1	Wheat	mitochondrion, plastid	57.14	55.31
TraesCS5A01G453100.1	Wheat	mitochondrion	57.14	55.31
TraesCS5B01G462100.1	Wheat	mitochondrion	57.14	55.31
TraesCS2D01G242400.3	Wheat	mitochondrion, plastid	57.28	55.3
OQU90803	Sorghum	mitochondrion, plastid	56.75	55.28
CDY16377	Canola	cytosol	53.57	54.8
HORVU5Hr1G109160.2	Barley	mitochondrion	55.82	54.45
TraesCS5D01G463900.1	Wheat	mitochondrion	56.75	52.83
Os03t0804400-01	Rice	cytosol, mitochondrion, nucleus	43.52	51.33
HORVU2Hr1G099060.1	Barley	cytosol	5.42	48.24
Zm00001d035209_P001	Maize	extracellular, nucleus, peroxisome	15.61	36.65
GSMUA_Achr4P17220_001	Banana	extracellular	3.17	35.29
CDY20653	Canola	cytosol	25.66	25.46
CDY31043	Canola	cytosol	25.0	24.26
GSMUA_Achr7P17120_001	Banana	cytosol	0.66	4.13

Protein Annotations

MapMan:22.6.3.8	UniProt:A0A078G5K4	EnsemblPlants:CDY20634	ProteinID:CDY20634	ProteinID:CDY20634.1	ncoils:Coil
InterPro:Cullin_repeat-like_dom_sf	InterPro:Exo84	InterPro:Exo84_C	GO:GO:0000145	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150	GO:GO:0009987
EnsemblPlantsGene:GSBRNA2T00012814001	PFAM:PF08700	PFAM:PF16528	PANTHER:PTHR21426	PANTHER:PTHR21426:SF15	SUPFAM:SSF74788
UniParc:UPI0004EEA4DB	SEG:seg	:	:	:	:

Description

BnaC08g14240DBnaC08g14240D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G5K4]

Coordinates

chrLK032110:-:373161..376321

Molecular Weight (calculated)

83429.1 Da

IEP (calculated)

5.023

GRAVY (calculated)

-0.218

Length

756 amino acids

Sequence
(BLAST)

001: MEARTRGSMS SSIGGSEELE ANLTLSDRLK VFKGSTFDPE AYVTSKCQHM NEKETKHLTS YLVELKKASA EEMRKSVYAN YAAFIRTSKE ISALEGQLLS
101: MRNLLSAQAA LVHGLADGVH ISSLCTDDAD DLTDQDLYNM DSKQLSKIET WVVEFFDRLE VLLAEKRVDE SMAALEEGRR VAMEAQEQRT LSPSTLLSLN
201: NEIKAKRQEL ADQLAEAIGQ PSTRAGELRS AVLALKKLGD GSRAHTLLLK SYQRRLQANI QSLRGSNTSY GVAFAATLSQ LVFSTIAQAA SDSLAVVGED
301: PSYSSELVTW AVKQAESFAL LLKRHTLASS AAAGSLRVTA ECIQLCASHC SSLESRGLAL SPVLLKHFRP GVEQALTGNL KRIEQSSAAL AASDDWSLAY
401: TPTGSRASSS TPIAPHLKLS ISAQRFNSMV QEFLEDAGPL DEALQLDGIA LDGVLQVFNA YVDLLINALP GSAENEENPV HRIVRIAETE SQQTALLVNA
501: LLLADELIPR SALRILPQGG TNQSTPRRGA SSDRQNRPEQ REWKKKLQRS VDRLRDSFCR QHALELIFTE EGEVRLSSEI YILMDETTEE PEWFPSPIFQ
601: ELFAKLTRIA TIVSDMFVGR ERFATILLMR LTETVILWIS DDQSFWEEME TGDKPLGPLG LQQFYLDMEF VMIFASQGRY LSRNLHQVIK NIIARAIEAV
701: SATGLDPYTT LPEEEWFAEV AQIAIKMLTG KGNFGGHGER DVTSPSVSSA KSYTSN

Best Arabidopsis Sequence Match ( AT1G10385.1 )
(BLAST)

001: MEARERGSMS SSIGNSAELE GNLTLSDRLK VFKGSTFDPD AYVTSKCQRM NEKETRHLSS YLVELKKASA EEMRKSVYAN YAAFIRTSKE ISALEGQLLS
101: MRNLLSAQAA LVHGLADGVH ISSLCADDAD DLRDEDLYDM DNKQLSNIEN WVVEFFDRLE VLLAEKRVEE SMAALEEGRR VAVEAHEKRT LSPTTLLSLN
201: NAIKEKRQEL ADQLAEAISQ PSTRGGELRS AVLSLKKLGD GSRAHTLLLR SYERRLQANI QSLRASNTSY GVAFAAALSQ LVFSTIAQAA SDSQAVVGED
301: PAYTSELVTW AVKQAESFAL LLKRHTLASS AAAGSLRVTA ECVQLCASHC SSLESRGLAL SPVLLKHFRP GVEQALTGNL KRIEQSSAAL AASDDWSLSY
401: TPTGSRASST TPTAPHLKLS ISAQRFNSMV QEFLEDAGPL DEALQLDGIA LDGVLQVFNS YVDLLINALP GSAENEENPV HRIVKVAETE SQQTALLVNA
501: LLLADELIPR SASRILPQGT SQSTPRRGSS DRQNRPEQRE WKKKLQRSVD RLRDSFCRQH ALELIFTEEG EVRLSSEIYI LMDETTEEPE WFPSPIFQEL
601: FAKLTRIAMI VSDMFVGRER FATILLMRLT ETVILWISDD QSFWEEMETG DKPLGPLGLQ QFYLDMEFVM IFASQGRYLS RNLHQVIKNI IARAVEAVSA
701: TGLDPYSTLP EEEWFAEVAQ IAIKMLMGKG NFGGHGERDV TSPSVSSAKS YTSN

Arabidopsis Description

EXO84AExocyst complex component EXO84A [Source:UniProtKB/Swiss-Prot;Acc:F4I4B6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.