CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY61243	Canola	cytosol	93.65	20.38
CDY66364	Canola	cytosol	93.65	17.0
CDY16377	Canola	cytosol	85.71	14.61
KRH47011	Soybean	cytosol	73.02	11.96
PGSC0003DMT400023748	Potato	cytosol	70.63	11.53
Solyc03g123870.2.1	Tomato	nucleus	70.63	11.53
VIT_09s0018g01920.t01	Wine grape	nucleus	69.84	11.44
KRH44640	Soybean	mitochondrion	70.63	10.37
CDY20634	Canola	cytosol	55.56	9.26
CDY20945	Canola	cytosol	55.56	9.26
CDY20653	Canola	cytosol	29.37	4.86
CDY31043	Canola	cytosol	28.57	4.62

Protein Annotations

EnsemblPlants:CDY66165	EnsemblPlantsGene:GSBRNA2T00052205001	GO:GO:0000145	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150	GO:GO:0009987	InterPro:Exo84
PANTHER:PTHR21426	PANTHER:PTHR21426:SF14	PFAM:PF08700	ProteinID:CDY66165	ProteinID:CDY66165.1	UniParc:UPI0004EE6B07
UniProt:A0A078JI35	MapMan:35.1	:	:	:	:

Description

BnaCnng49740DBnaCnng49740D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JI35]

Coordinates

chrLK035115:+:19424..20063

Molecular Weight (calculated)

13773.2 Da

IEP (calculated)

7.413

GRAVY (calculated)

-0.429

Length

126 amino acids

Sequence
(BLAST)

001: MAAKTARSKS TSTKENGVRV EEGLSLFKSD KFDADAYVQS KCSINEKDIK QLCSYLLDLK KASAEEMRRS VYANYPAFIR TSKEISDLEG ELSSIRNLLS
101: TQATLIHGLA NGVNIDHDGS PANGVL

Best Arabidopsis Sequence Match ( AT5G49830.1 )
(BLAST)

001: MAAKTARSKA TPTKENGVRV EEGLSLFKSD KFDADAYVQS KCSINEKDIK QLCSYLLDLK RASAEEMRRS VYANYPAFIR TSKEISDLEG ELSSIRNLLS
101: TQATLIHGLA DGVNIDDDKV SDESLANGLL NFEDNGLSDL EKWATEFPDH LDALLAERRV DEALAAFDEG EILVSQANEK HTLSSSVLSS LQFAIAERKQ
201: KLADQLAKAA CQPSTRGGEL RSAIAALKRL GDGPRAHTVL LDAHFQRYQY NMQSLRPSST SYGGAYTAAL SQLVFSAISQ ASSDSLGIFG KEPAYSSELV
301: TWATKQTEAF SLLVKRHALA SSAAAGGLRA AAECAQIALG HCSLLEARGL SLCPVLLKHF KPIVEQALEA NLKRIEENTA AMAAADDWVL TSPPAGSRHA
401: STAFQNKLTS SAHRFNLMVQ DFFEDVGPLL SMQLGSKALE GLFRVFNSYV DVLVRALPGS IEEEDPNFES SCNKIVQMAE TEANQLALLA NASLLADELL
501: PRAAMKLSLD QTGQRTDDLR RPLDRQNRNP EQREWKRRLL STVDKLKDAF CRQHALDLIF TEEGDSHLSA DMYVNIDENG EDVDFFPSLI FQELFAKLNR
601: MASLAADMFV GRERFAISLL MRLTETVILW LSGDQSFWDD IEEGPRPLGP LGLRQLYLDM KFVICFASQG RYLSRNLHRG TNEIISKALA AFTATGIDPY
701: SELPEDDWFN DICVDAMERL SGKTKGNNGD VHSPTASVSA QSVSSARSHG SY

Arabidopsis Description

EXO84BExocyst complex component 84B [Source:UniProtKB/TrEMBL;Acc:F4K7F5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.