Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
28394025
|
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400023748 | Potato | cytosol | 98.32 | 98.32 |
| VIT_09s0018g01920.t01 | Wine grape | nucleus | 81.48 | 81.79 |
| KRH47011 | Soybean | cytosol | 79.66 | 79.97 |
| Bra037951.1-P | Field mustard | cytosol | 66.58 | 74.06 |
| CDY66364 | Canola | cytosol | 66.32 | 73.78 |
| CDY61243 | Canola | cytosol | 54.4 | 72.54 |
| CDY66165 | Canola | cytosol | 11.53 | 70.63 |
| CDY16377 | Canola | cytosol | 67.23 | 70.23 |
| KRH44640 | Soybean | mitochondrion | 77.98 | 70.16 |
| Bra022506.1-P | Field mustard | nucleus | 67.23 | 70.14 |
| AT5G49830.2 | Thale cress | cytosol, endoplasmic reticulum, nucleus | 72.54 | 68.8 |
| Solyc04g005850.1.1 | Tomato | cytosol | 55.96 | 57.14 |
| Solyc09g072720.1.1 | Tomato | cytosol, nucleus, plastid | 24.48 | 25.0 |
| Solyc02g069080.2.1 | Tomato | nucleus | 24.74 | 24.68 |
Protein Annotations
| MapMan:22.6.3.8 | InterPro:Cullin_repeat-like_dom_sf | InterPro:Exo84 | InterPro:Exo84_C | GO:GO:0000145 | GO:GO:0001927 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006887 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0051601 | UniProt:K4BN85 | PFAM:PF08700 |
| PFAM:PF16528 | PANTHER:PTHR21426 | PANTHER:PTHR21426:SF14 | SUPFAM:SSF74788 | EnsemblPlantsGene:Solyc03g123870.2 | EnsemblPlants:Solyc03g123870.2.1 |
| UniParc:UPI0002765DF8 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr3:-:70556061..70564270
Molecular Weight (calculated)
85084.0 Da
IEP (calculated)
5.476
GRAVY (calculated)
-0.265
Length
772 amino acids
Sequence
(BLAST)
(BLAST)
001: MASVKSSRSR AHAVTQSKGI NKDTGPKLEE NLNVFKSDNF DADAFVQSKC HSLNEKEIRQ LCSYLLELKR ASAEEMRRSV YANYTAFIRT SKEISDLEGE
101: LSSMKNLLST QATLIHGLAE GVHIDSLSDV VPESTSDSSP TADVREPSDL EKWLTEFPDH LDVLLAERRV DEALLSLDEG ERVASDAKEK KTLGHAVLLS
201: LQTAIAERRQ KLADQLAEIA CQPSTRGAEL RAAISALKKL GDGPRAHSLL LNAHYQKYQF NMKNLRPSST SYGGAYTAAL SQLVFSGIAQ AATDSLAIFG
301: KEPAYTSELV MWSTKQTEAF ALLVKRHALT SSAAAGGLRA AAECVQIALG HCSLLEARGL ALCPVLLKLF RPSVEQALDA NLKRIEESTA ALAAADDWEL
401: TYPPSVTRAS GRSAGAVPGS TGAYQHKLSS SAHRFNLMVQ DFFEDVGPLL SMQLGGKALE GLFQVFNTYV NTLVRALPGS MEDEASYEDS GNKIVRMAET
501: EAQQIALLAN ASLLADELLP RAAMKLAPLA NQKDDLQRRA SDRQSRHPEQ REWKKRLVNS VDRLKDSFCQ QHALDLIFTE EGDSHLTAEM YINMEGNADD
601: MEWSPSLIFQ ELYVKLNRMA AIAADMFVGR ERFAMLLLMR LTETVILWLS QDQSFWDDIE EGPRPLGHLG LQQFYLDMKF VTCFASQGRY LSRNLLRVVN
701: DIISKAMSAF AATGMDPYSV LPEDEWFTEI AQDAMEKLSG KPKVANGERD LNSPTASVSA QSMSSVRSHG SY
101: LSSMKNLLST QATLIHGLAE GVHIDSLSDV VPESTSDSSP TADVREPSDL EKWLTEFPDH LDVLLAERRV DEALLSLDEG ERVASDAKEK KTLGHAVLLS
201: LQTAIAERRQ KLADQLAEIA CQPSTRGAEL RAAISALKKL GDGPRAHSLL LNAHYQKYQF NMKNLRPSST SYGGAYTAAL SQLVFSGIAQ AATDSLAIFG
301: KEPAYTSELV MWSTKQTEAF ALLVKRHALT SSAAAGGLRA AAECVQIALG HCSLLEARGL ALCPVLLKLF RPSVEQALDA NLKRIEESTA ALAAADDWEL
401: TYPPSVTRAS GRSAGAVPGS TGAYQHKLSS SAHRFNLMVQ DFFEDVGPLL SMQLGGKALE GLFQVFNTYV NTLVRALPGS MEDEASYEDS GNKIVRMAET
501: EAQQIALLAN ASLLADELLP RAAMKLAPLA NQKDDLQRRA SDRQSRHPEQ REWKKRLVNS VDRLKDSFCQ QHALDLIFTE EGDSHLTAEM YINMEGNADD
601: MEWSPSLIFQ ELYVKLNRMA AIAADMFVGR ERFAMLLLMR LTETVILWLS QDQSFWDDIE EGPRPLGHLG LQQFYLDMKF VTCFASQGRY LSRNLLRVVN
701: DIISKAMSAF AATGMDPYSV LPEDEWFTEI AQDAMEKLSG KPKVANGERD LNSPTASVSA QSMSSVRSHG SY
001: MAAKTARSKA TPTKENGVRV EEGLSLFKSD KFDADAYVQS KCSINEKDIK QLCSYLLDLK RASAEEMRRS VYANYPAFIR TSKEISDLEG ELSSIRNLLS
101: TQATLIHGLA DGVNIDDDKV SDESLANGLL NFEDNGLSDL EKWATEFPDH LDALLAERRV DEALAAFDEG EILVSQANEK HTLSSSVLSS LQFAIAERKQ
201: KLADQLAKAA CQPSTRGGEL RSAIAALKRL GDGPRAHTVL LDAHFQRYQY NMQSLRPSST SYGGAYTAAL SQLVFSAISQ ASSDSLGIFG KEPAYSSELV
301: TWATKQTEAF SLLVKRHALA SSAAAGGLRA AAECAQIALG HCSLLEARGL SLCPVLLKHF KPIVEQALEA NLKRIEENTA AMAAADDWVL TSPPAGSRHA
401: STAFQNKLTS SAHRFNLMVQ DFFEDVGPLL SMQLGSKALE GLFRVFNSYV DVLVRALPGS IEEEDPNFES SCNKIVQMAE TEANQLALLA NASLLADELL
501: PRAAMKLSLD QTGQRTDDLR RPLDRQNRNP EQREWKRRLL STVDKLKDAF CRQHALDLIF TEEGDSHLSA DMYVNIDENG EDVDFFPSLI FQELFAKLNR
601: MASLAADMFV GRERFAISLL MRLTETVILW LSGDQSFWDD IEEGPRPLGP LGLRQLYLDM KFVICFASQG RYLSRNLHRG TNEIISKALA AFTATGIDPY
701: SELPEDDWFN DICVDAMERL SGKTKGNNGD VHSPTASVSA QSVSSARSHG SY
101: TQATLIHGLA DGVNIDDDKV SDESLANGLL NFEDNGLSDL EKWATEFPDH LDALLAERRV DEALAAFDEG EILVSQANEK HTLSSSVLSS LQFAIAERKQ
201: KLADQLAKAA CQPSTRGGEL RSAIAALKRL GDGPRAHTVL LDAHFQRYQY NMQSLRPSST SYGGAYTAAL SQLVFSAISQ ASSDSLGIFG KEPAYSSELV
301: TWATKQTEAF SLLVKRHALA SSAAAGGLRA AAECAQIALG HCSLLEARGL SLCPVLLKHF KPIVEQALEA NLKRIEENTA AMAAADDWVL TSPPAGSRHA
401: STAFQNKLTS SAHRFNLMVQ DFFEDVGPLL SMQLGSKALE GLFRVFNSYV DVLVRALPGS IEEEDPNFES SCNKIVQMAE TEANQLALLA NASLLADELL
501: PRAAMKLSLD QTGQRTDDLR RPLDRQNRNP EQREWKRRLL STVDKLKDAF CRQHALDLIF TEEGDSHLSA DMYVNIDENG EDVDFFPSLI FQELFAKLNR
601: MASLAADMFV GRERFAISLL MRLTETVILW LSGDQSFWDD IEEGPRPLGP LGLRQLYLDM KFVICFASQG RYLSRNLHRG TNEIISKALA AFTATGIDPY
701: SELPEDDWFN DICVDAMERL SGKTKGNNGD VHSPTASVSA QSVSSARSHG SY
Arabidopsis Description
EXO84BExocyst complex component 84B [Source:UniProtKB/TrEMBL;Acc:F4K7F5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.