CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
extracellular 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH47011	Soybean	cytosol	85.08	94.93
VIT_09s0018g01920.t01	Wine grape	nucleus	73.43	81.92
PGSC0003DMT400023748	Potato	cytosol	70.75	78.63
Solyc03g123870.2.1	Tomato	nucleus	70.16	77.98
Bra037951.1-P	Field mustard	cytosol	60.96	75.36
CDY66364	Canola	cytosol	60.72	75.07
CDY61243	Canola	cytosol	49.65	73.58
CDY16377	Canola	cytosol	61.42	71.31
Bra022506.1-P	Field mustard	nucleus	61.07	70.81
CDY66165	Canola	cytosol	10.37	70.63
AT5G49830.2	Thale cress	cytosol, endoplasmic reticulum, nucleus	65.62	69.16
KRH69407	Soybean	nucleus, plastid	49.77	56.93
KRH74737	Soybean	cytosol, plastid	49.65	56.8
KRG89402	Soybean	cytosol	22.49	24.87
KRH50470	Soybean	cytosol	22.26	24.33
KRH19603	Soybean	cytosol	20.4	20.11
KRH32230	Soybean	cytosol	20.16	19.61

Protein Annotations

EntrezGene:100816882	MapMan:22.6.3.8	UniProt:A0A0R0IQT8	EMBL:ACUP02004945	InterPro:Cullin_repeat-like_dom_sf	InterPro:Exo84
InterPro:Exo84_C	EnsemblPlantsGene:GLYMA_08G223000	GO:GO:0000145	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	EnsemblPlants:KRH44640	ProteinID:KRH44640	ProteinID:KRH44640.1	PFAM:PF08700	PFAM:PF16528
PANTHER:PTHR21426	PANTHER:PTHR21426:SF14	SUPFAM:SSF74788	TMHMM:TMhelix	UniParc:UPI0006EE156A	SEG:seg

Description

hypothetical protein

Coordinates

chr8:+:18092278..18101124

Molecular Weight (calculated)

95640.7 Da

IEP (calculated)

5.803

GRAVY (calculated)

-0.268

Length

858 amino acids

Sequence
(BLAST)

001: MLKHRCRRAA SSFNLFRGFR VCCLMSLRTI SVFVVFLFRL PEEEKKRKAW CAGNLCLNSY HHRFLRDQRE IETKQRLLFA VAESDLNLVD MASGKTSRSR
101: SAMASAKENG PKLEEGLNPF KSDKFDAESY VQSNCSLNDK EIKQLCTYLV DLKKASAEEM RRSVYANYAA FIRTSKEISD LEGELSSIRN LLSTQAALIH
201: GLAEGVHIDS LSISNSDDFS VNATSDSEDK EISDLDKWLV EFPDLLDVLL AERRVEEALA ALDEGECVVS EAKEMKSINP SVLLSLQNSI GERRQKLADQ
301: LAEAACQPST RGAELRASVS ALKKLGDGPH AHSLLLNAHQ QRYQYNMQSL RPSSTSYGGA YTAALAQLVF SAVAQAASDS LAIFGEEPAY TSELVMWATK
401: QTEAFSFLVK RHALASSAAA GGLRAAAECV QIALGHCSLL EARGLALCPV LLKLFRPSVE QALDANLKRI QESTAALAAA DDWVLTYSPT SNRRTSRPSS
501: ISISNTTAFQ HKLTSSAHRF NLMVQDFFED VGPLLSMQLG GQALEGLFQV FNSYVNMLIK ALPGSMEEEA SFEDAGNKIV RMAETEAQQI ALLANASLLA
601: DELLPRAAMK LSPINQAAYK DDNRKRTSER QNRHPEQREW RKRLVSSVDR LKDTFCRQHA LDLIFTEEGD SHLTADMYIN MDGNAEVEWT PSSIFQELFV
701: KLNRMANIAA DMFVGRERFA TLLLMRLTET VMLWLSEDQS FWDDIEEGPR PLGPLGLQQF YLDMKFVVCF ASHGRYLSRN LQRIVNEIIT KAMAAFSATG
801: MDPYRELPED EWFNDICQDA MERLSGKPKE INGERDLNSP TASVSAQSIS SVRSHSSS

Best Arabidopsis Sequence Match ( AT5G49830.1 )
(BLAST)

001: MAAKTARSKA TPTKENGVRV EEGLSLFKSD KFDADAYVQS KCSINEKDIK QLCSYLLDLK RASAEEMRRS VYANYPAFIR TSKEISDLEG ELSSIRNLLS
101: TQATLIHGLA DGVNIDDDKV SDESLANGLL NFEDNGLSDL EKWATEFPDH LDALLAERRV DEALAAFDEG EILVSQANEK HTLSSSVLSS LQFAIAERKQ
201: KLADQLAKAA CQPSTRGGEL RSAIAALKRL GDGPRAHTVL LDAHFQRYQY NMQSLRPSST SYGGAYTAAL SQLVFSAISQ ASSDSLGIFG KEPAYSSELV
301: TWATKQTEAF SLLVKRHALA SSAAAGGLRA AAECAQIALG HCSLLEARGL SLCPVLLKHF KPIVEQALEA NLKRIEENTA AMAAADDWVL TSPPAGSRHA
401: STAFQNKLTS SAHRFNLMVQ DFFEDVGPLL SMQLGSKALE GLFRVFNSYV DVLVRALPGS IEEEDPNFES SCNKIVQMAE TEANQLALLA NASLLADELL
501: PRAAMKLSLD QTGQRTDDLR RPLDRQNRNP EQREWKRRLL STVDKLKDAF CRQHALDLIF TEEGDSHLSA DMYVNIDENG EDVDFFPSLI FQELFAKLNR
601: MASLAADMFV GRERFAISLL MRLTETVILW LSGDQSFWDD IEEGPRPLGP LGLRQLYLDM KFVICFASQG RYLSRNLHRG TNEIISKALA AFTATGIDPY
701: SELPEDDWFN DICVDAMERL SGKTKGNNGD VHSPTASVSA QSVSSARSHG SY

Arabidopsis Description

EXO84BExocyst complex component 84B [Source:UniProtKB/TrEMBL;Acc:F4K7F5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.