CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31043	Canola	cytosol	97.24	95.12
AT1G10180.1	Thale cress	cytosol	86.48	85.7
KRG89402	Soybean	cytosol	60.76	59.66
KRH50470	Soybean	cytosol	61.29	59.49
VIT_01s0011g01710.t01	Wine grape	cytosol	59.45	58.15
PGSC0003DMT400026847	Potato	nucleus	57.61	56.57
Solyc02g069080.2.1	Tomato	nucleus	57.35	56.46
GSMUA_Achr7P17130_001	Banana	nucleus	45.54	51.48
TraesCS2D01G208300.1	Wheat	cytosol	50.92	49.87
TraesCS2B01G227800.1	Wheat	cytosol	50.92	49.87
TraesCS2A01G200500.1	Wheat	nucleus	50.79	49.68
Os07t0568000-01	Rice	nucleus	50.39	49.68
Zm00001d021828_P004	Maize	nucleus	49.48	47.42
HORVU2Hr1G039170.2	Barley	mitochondrion	50.52	46.67
KXG36501	Sorghum	cytosol	49.87	42.46
CDY61243	Canola	cytosol	24.15	31.78
CDY66165	Canola	cytosol	4.86	29.37
CDY66364	Canola	cytosol	24.54	26.95
CDY16377	Canola	cytosol	25.72	26.52
CDY20634	Canola	cytosol	25.46	25.66
CDY20945	Canola	cytosol	25.07	25.26

Protein Annotations

MapMan:22.6.3.8	UniProt:A0A078G7R1	EnsemblPlants:CDY20653	ProteinID:CDY20653	ProteinID:CDY20653.1	ncoils:Coil
InterPro:Cullin_repeat-like_dom_sf	InterPro:Exo84	InterPro:Exo84_C	GO:GO:0000145	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150	GO:GO:0009987
EnsemblPlantsGene:GSBRNA2T00012837001	PFAM:PF16528	PANTHER:PTHR21426	PANTHER:PTHR21426:SF2	SUPFAM:SSF74788	UniParc:UPI0004EDFD98
SEG:seg	:	:	:	:	:

Description

BnaC08g14050DBnaC08g14050D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G7R1]

Coordinates

chrLK032110:+:458146..462022

Molecular Weight (calculated)

85119.6 Da

IEP (calculated)

4.279

GRAVY (calculated)

-0.198

Length

762 amino acids

Sequence
(BLAST)

001: MESSEEEDDL PSIESITPQS KIDSVHQSLT EKGIRKLCCE LLDLKDAVEN MCGDMRTKYL AFLRISEEAV EMEHELVELR KHISSQGILV HDLMSGLGRE
101: MDEWKRSSGD ADESEEVEEP SPSELTDPNS EFLEKIDILL AEHKVDEALE AVDTEERNNP ELKGAADTSS YKSAFIERKA VLEDQLLRIA KQPSVSVTEL
201: KHTLNGLIRL GKGPSAHQLL LKHYATSLHR RIEAFLPSCS SCPNTFPATL SKLVFSNISL AAKESASMFG DDDNPAYSNK VVQWAEREVE YLVRLVKENA
301: APSETVYALR AASVCLQDCL NYCKALEPQG LILSKLFLVL FRPYVEEVLE LNFRRARKVV FDLNEADEGL ESSSDFVAVL SDFAIASDTT MTDCSIRFMQ
401: IVQDILEQLT HLAVLHFGES VLARVLQLYD KYIDFLIKAL PGHADEDGLP ELQDHTILTR AETDSEQLAL LGAAFTILDE LLPKSLVKVW KLEVENGGGD
501: GGDSSSSPSL ISSSAPELKE WKRHMVQAFD KLRNYFCLQF VLSFIYSREG LTRLDALIYL TETPDDLHLP SLPFQALFSK LQQLAIIAGD VLLGKEKLQK
601: ILLARLTETV IIWLSNEQEF WSAFEDESTP LQPSGLQQLI LDMNFTVEIA RFAGYPFKVV QNHASVVINR AINIFSSRGI NPQSSLPKAE WFTEAAKSAI
701: NRLLMGSDEA SEAEEEYECE VEEGEEDDSL ETSSLSTMDS FESFASASMA DLESPSFTDS ES

Best Arabidopsis Sequence Match ( AT1G10180.1 )
(BLAST)

001: MESSEEDDEY PFIESITPQS KIDSVHQSLT EKGIRKLCCE LMDLKDAVEN MCGDMRTKYL AFLRISEEAV EMEHELVELR KHISSQGILV QDLMAGVCRE
101: MDDWNRLPGD VHDAEVEEDP LPNEVTDPKS EFLEKIDLLL AEHKVDEALE AMDAEERSSP DLKGSVEMSS YKSAFMERKA VLEDQLLRIA KQPSICVAEL
201: KHALIGLIRL GKGPSAHQLL LKFYATSLRR RIEAFLPSCL TCPNTFPATL SKLVFSNISV ATKESAAMFG DDDNPAYSNK VVQWAEREVE YLVRLVKENA
301: SPSETASALR AASICLQDCL NYCKVLEPQG LFLSKLFLVL FRPYVEEVLE LNFRRARRVI FDLNETDEGL ESPSDFVTIL SEFAIASDTM MTDCSIRFMQ
401: IVQDILEQLT HLVVLHFGES VLTRILQLYD KYIDFLIKAL PGHSDEDGLP ELQDNTVLAR AETDSEQLAL LGAAFTILDE LLPRSLVKVW KLQIENGGGE
501: GENSAALNSS AAPELKEWKR HMVQAFDKLR NYFCLQFVLS FIYSREGLTR LDALIYLTET PDDLHLPSLP FQALFSKLQQ LAIIAGDVLL GKEKLQKILL
601: ARLTETVIIW LSNEQEFWSA FEDESNPLQP SGLQQLILDM NFTVEIARFA GYPFKVVQNH ASVVINRAIN IFSERGINPQ SSLPKTEWFT EAAKSAINRL
701: LMGSEDASEP EEYECEEEEE DDHHIVLPEM DDDSDSEDTS SLSTVDSFES FASASMADLE SPSFTDSES

Arabidopsis Description

EXO84CExocyst complex component EXO84C [Source:UniProtKB/Swiss-Prot;Acc:Q9SY60]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.