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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • mitochondrion 4
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:plastid
mitochondrion: 27297264
msms PMID: 27297264 doi
D Dahal, KJ Newton, BP Mooney
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d007760_P001 Maize mitochondrion, plastid 96.16 96.53
EER96033 Sorghum mitochondrion, plastid 96.54 96.17
TraesCS2B01G263000.1 Wheat mitochondrion, plastid 91.42 91.42
TraesCS2A01G244100.1 Wheat mitochondrion, plastid 89.63 89.86
Os07t0200000-01 Rice plasma membrane 90.65 89.85
TraesCS2D01G242400.3 Wheat mitochondrion, plastid 90.01 89.78
HORVU2Hr1G052050.2 Barley cytosol 77.85 89.02
Zm00001d013049_P002 Maize plastid 81.43 82.06
VIT_01s0026g01230.t01 Wine grape cytosol 56.47 64.01
AT1G10385.1 Thale cress nucleus 56.72 58.75
Solyc04g005850.1.1 Tomato cytosol 56.72 58.6
CDY20945 Canola cytosol 56.21 58.07
CDY20634 Canola cytosol 56.08 57.94
PGSC0003DMT400007390 Potato cytosol 19.33 57.85
Bra018442.1-P Field mustard cytosol 55.95 57.8
KRH69407 Soybean nucleus, plastid 55.06 57.33
KRH74737 Soybean cytosol, plastid 54.55 56.8
Zm00001d035209_P001 Maize extracellular, nucleus, peroxisome 18.31 44.41
Zm00001d021828_P004 Maize nucleus 23.82 23.4
Zm00001d031867_P001 Maize cytosol, mitochondrion, nucleus 20.87 17.12
Protein Annotations
MapMan:22.6.3.8UniProt:A0A1D6HV41ncoils:CoilInterPro:Cullin_repeat-like_dom_sfInterPro:Exo84InterPro:Exo84_C
GO:GO:0000145GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006810
GO:GO:0006887GO:GO:0008150GO:GO:0009987ProteinID:ONM52158.1PFAM:PF08700PFAM:PF16528
PANTHER:PTHR21426PANTHER:PTHR21426:SF14SUPFAM:SSF74788UniParc:UPI000844259BEnsemblPlantsGene:Zm00001d019104EnsemblPlants:Zm00001d019104_P001
EnsemblPlants:Zm00001d019104_T001SEG:seg::::
Description
Exocyst complex component EXO84B
Coordinates
chr7:+:16823188..16835309
Molecular Weight (calculated)
85127.1 Da
IEP (calculated)
4.954
GRAVY (calculated)
-0.178
Length
781 amino acids
Sequence
(BLAST)
001: MASAKSSRSR PAGHSGVFPV GSAAAVGSGG GGGGGGDGGV QLADKLKIFK TDNFDPDAYV QSKCQTMNEK EIRHLCSYLQ DLKKASAEEM RRSVYANYAA
101: FIRTSKEISD LEGELLSIRN LLNTQAALIH GLSEGVQIDS LTSGPEGSAE DDISNVEDQE PSEIQKWSAD FPDMLDVLLA ERRVDEALDA LDEAERVAVD
201: AKRKQTLTAA EVLALKRSIS DNRQRLADQL AEAACQSSTR GIELRAAASA LKRLGDGPRA HSLLLSAHNQ RLQCNMQTIH PSSTSYGGAY TAALAQQVFS
301: VIAQALSDSV DVFGDESCYA SELVTWATKQ VMSFALLVKR HVLSSCAAAG GLRAAAECVQ ISLGHCSLLE ARGLSVSSVL LKQFKPSLEQ ALDANLRRIE
401: ESTAALAAAD NWILTYPPTG IRPLTRLSAA NLALQPKLSS SGHRFNSMVQ DFFEDVAPLL SLQLGGSTMD GITQIFNSYV NLLINALPGS MDDEANLDGL
501: GNKIVRMAET EEQQLALLAN ASLLAEELLP RAAMKLSSIN QSMDDLCKRG TDKQSRVPEQ REWKRKLHRM VDRLRDSFCR QHALELIFTD EGDTHLSAEM
601: YISMDNTVEE PEWVPSPIFQ ELYAKLNRMA SIAAEMFVGR ERFATLLMMR LTETVILWLS EDQAFWEEIE QGAKPLGPLG LQQFYLDMQF VIIFGQGRFL
701: SRHVHQVILD VIDRAMAAFS ATGMNPDSVL PGDDWFMEVS QEVVSIISGR GRVANGDREA NSPTASVSAH SISSFRSHGS S
Best Arabidopsis Sequence Match ( AT5G49830.1 )
(BLAST)
001: MAAKTARSKA TPTKENGVRV EEGLSLFKSD KFDADAYVQS KCSINEKDIK QLCSYLLDLK RASAEEMRRS VYANYPAFIR TSKEISDLEG ELSSIRNLLS
101: TQATLIHGLA DGVNIDDDKV SDESLANGLL NFEDNGLSDL EKWATEFPDH LDALLAERRV DEALAAFDEG EILVSQANEK HTLSSSVLSS LQFAIAERKQ
201: KLADQLAKAA CQPSTRGGEL RSAIAALKRL GDGPRAHTVL LDAHFQRYQY NMQSLRPSST SYGGAYTAAL SQLVFSAISQ ASSDSLGIFG KEPAYSSELV
301: TWATKQTEAF SLLVKRHALA SSAAAGGLRA AAECAQIALG HCSLLEARGL SLCPVLLKHF KPIVEQALEA NLKRIEENTA AMAAADDWVL TSPPAGSRHA
401: STAFQNKLTS SAHRFNLMVQ DFFEDVGPLL SMQLGSKALE GLFRVFNSYV DVLVRALPGS IEEEDPNFES SCNKIVQMAE TEANQLALLA NASLLADELL
501: PRAAMKLSLD QTGQRTDDLR RPLDRQNRNP EQREWKRRLL STVDKLKDAF CRQHALDLIF TEEGDSHLSA DMYVNIDENG EDVDFFPSLI FQELFAKLNR
601: MASLAADMFV GRERFAISLL MRLTETVILW LSGDQSFWDD IEEGPRPLGP LGLRQLYLDM KFVICFASQG RYLSRNLHRG TNEIISKALA AFTATGIDPY
701: SELPEDDWFN DICVDAMERL SGKTKGNNGD VHSPTASVSA QSVSSARSHG SY
Arabidopsis Description
EXO84BExocyst complex component 84B [Source:UniProtKB/TrEMBL;Acc:F4K7F5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.