Factsheet for Os07t0200000-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
mitochondrion 3
plastid 2

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704
plasma membrane: 28056797

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G242400.3	Wheat	mitochondrion, plastid	92.01	92.59
TraesCS2A01G244100.1	Wheat	mitochondrion, plastid	91.12	92.17
EER96033	Sorghum	mitochondrion, plastid	90.23	90.69
Zm00001d019104_P001	Maize	mitochondrion	89.85	90.65
TraesCS2B01G263000.1	Wheat	mitochondrion, plastid	89.59	90.4
Zm00001d007760_P001	Maize	mitochondrion, plastid	89.09	90.23
HORVU2Hr1G052050.2	Barley	cytosol	77.67	89.6
Os03t0804400-01	Rice	cytosol, mitochondrion, nucleus	60.91	74.88
VIT_01s0026g01230.t01	Wine grape	cytosol	56.47	64.59
AT1G10385.1	Thale cress	nucleus	56.35	58.89
Solyc04g005850.1.1	Tomato	cytosol	55.96	58.33
CDY20945	Canola	cytosol	55.71	58.07
CDY20634	Canola	cytosol	55.58	57.94
Bra018442.1-P	Field mustard	cytosol	55.46	57.8
KRH74737	Soybean	cytosol, plastid	54.82	57.6
KRH69407	Soybean	nucleus, plastid	54.82	57.6
PGSC0003DMT400007390	Potato	cytosol	18.78	56.7
Os07t0568000-01	Rice	nucleus	24.24	24.71
Os08t0566700-01	Rice	cytosol	15.48	17.21

Protein Annotations

MapMan:22.6.3.8	EntrezGene:4342659	ProteinID:BAC84209.1	ProteinID:BAF21041.1	ProteinID:BAT00493.1	ProteinID:BAT00494.1
ncoils:Coil	InterPro:Cullin_repeat-like_dom_sf	ProteinID:EAZ39040.1	InterPro:Exo84	InterPro:Exo84_C	GO:GO:0000145
GO:GO:0001927	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810
GO:GO:0006887	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	GO:GO:0051601	EnsemblPlantsGene:Os07g0200000
EnsemblPlants:Os07t0200000-01	PFAM:PF08700	PFAM:PF16528	PANTHER:PTHR21426	PANTHER:PTHR21426:SF14	UniProt:Q6Z371
SUPFAM:SSF74788	UniParc:UPI00001BF5EC	RefSeq:XP_015648001.1	SEG:seg	:	:

Description

Vps51/Vps67 domain containing protein. (Os07t0200000-01);Similar to predicted protein. (Os07t0200000-02)

Coordinates

chr7:-:5418770..5426572

Molecular Weight (calculated)

85774.8 Da

IEP (calculated)

4.959

GRAVY (calculated)

-0.214

Length

788 amino acids

Sequence
(BLAST)

001: MASAKSSRSR PAGHSGVFPV SGAVGGGGGG GGGGGGGGGG GGDGGVQLAD KLKIFKTDNF DPDAYVQSKC QTMNEKEIRH LCSYLQDLKK ASAEEMRRSV
101: YANYAAFIRT SKEISDLEGE LLSIRNLLNT QAALIHGLSE GVQIDSLTSN TEGSAEDDIS NVEDQEPSEI QKWSADFPDM LDVLLAERRV DEALDALDEA
201: ERLASDAKLK QTLTATEIAA LRRAVSDNRQ KLADQLAEAA CQSSTRGIEL RAAASALKRL GDGPRAHSLL LNAHNQRLQC NMQTIHPSST SYGGAYTAAL
301: AQQVFSVVAQ ALSDSVEVFG DESCYASELV TWATKQVMSF ALLVKRHVLS SCAAAGGLRA AAECVQISLG HCSLLEARGL SVAAVLLRQF RPSLEQALYS
401: NIRRIEESTA ALAAADDWIL TYPPTGIRPL ARSSAANLAL QPKLSNSAHR FNSMVQEFFE DVAPLLSLQL GGSTMDDITK IFNSYVNLLI SALPGSMEDE
501: ANIDGLGNKI VRMAESEEQQ LALLANASLL AEELLPRAAM KLSSMNHSSM DDLRKRGSDK QNRMPEQREW KRKLQRMVDR LRDSFCRQHA LELIFTDEGE
601: THLSADMYIS MDNTVEEPEW APSLIFQELY AKLNRMASIA ADMFVGRERF ATLLMMRLTE TVILWLSEDQ AFWEEIEQGP KPLGPLGLQQ FYLDMQFVII
701: FGQGRFLSRH VHQVILDIID RAMAAFSATG MNPDSVLPGD DWFMDVSQEV VSMISGKGRA ANGDREINSP TASVSAHSMS SFRSHGSS

Best Arabidopsis Sequence Match ( AT5G49830.1 )
(BLAST)

001: MAAKTARSKA TPTKENGVRV EEGLSLFKSD KFDADAYVQS KCSINEKDIK QLCSYLLDLK RASAEEMRRS VYANYPAFIR TSKEISDLEG ELSSIRNLLS
101: TQATLIHGLA DGVNIDDDKV SDESLANGLL NFEDNGLSDL EKWATEFPDH LDALLAERRV DEALAAFDEG EILVSQANEK HTLSSSVLSS LQFAIAERKQ
201: KLADQLAKAA CQPSTRGGEL RSAIAALKRL GDGPRAHTVL LDAHFQRYQY NMQSLRPSST SYGGAYTAAL SQLVFSAISQ ASSDSLGIFG KEPAYSSELV
301: TWATKQTEAF SLLVKRHALA SSAAAGGLRA AAECAQIALG HCSLLEARGL SLCPVLLKHF KPIVEQALEA NLKRIEENTA AMAAADDWVL TSPPAGSRHA
401: STAFQNKLTS SAHRFNLMVQ DFFEDVGPLL SMQLGSKALE GLFRVFNSYV DVLVRALPGS IEEEDPNFES SCNKIVQMAE TEANQLALLA NASLLADELL
501: PRAAMKLSLD QTGQRTDDLR RPLDRQNRNP EQREWKRRLL STVDKLKDAF CRQHALDLIF TEEGDSHLSA DMYVNIDENG EDVDFFPSLI FQELFAKLNR
601: MASLAADMFV GRERFAISLL MRLTETVILW LSGDQSFWDD IEEGPRPLGP LGLRQLYLDM KFVICFASQG RYLSRNLHRG TNEIISKALA AFTATGIDPY
701: SELPEDDWFN DICVDAMERL SGKTKGNNGD VHSPTASVSA QSVSSARSHG SY

Arabidopsis Description

EXO84BExocyst complex component 84B [Source:UniProtKB/TrEMBL;Acc:F4K7F5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.