CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

nucleus 2
mitochondrion 4
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d007760_P001	Maize	mitochondrion, plastid	96.05	96.79
Zm00001d019104_P001	Maize	mitochondrion	96.17	96.54
TraesCS2B01G263000.1	Wheat	mitochondrion, plastid	91.84	92.19
TraesCS2A01G244100.1	Wheat	mitochondrion, plastid	89.92	90.5
TraesCS2D01G242400.3	Wheat	mitochondrion, plastid	90.31	90.42
Os07t0200000-01	Rice	plasma membrane	90.69	90.23
HORVU2Hr1G052050.2	Barley	cytosol	77.93	89.46
OQU90803	Sorghum	mitochondrion, plastid	80.99	81.83
VIT_01s0026g01230.t01	Wine grape	cytosol	56.12	63.86
AT1G10385.1	Thale cress	nucleus	56.76	59.02
Solyc04g005850.1.1	Tomato	cytosol	56.63	58.73
PGSC0003DMT400007390	Potato	cytosol	19.52	58.62
CDY20945	Canola	cytosol	56.25	58.33
CDY20634	Canola	cytosol	56.12	58.2
Bra018442.1-P	Field mustard	cytosol	55.99	58.07
KRH69407	Soybean	nucleus, plastid	54.85	57.33
KRH74737	Soybean	cytosol, plastid	54.34	56.8
KXG36501	Sorghum	cytosol	24.23	21.23
KXG25355	Sorghum	cytosol, nucleus, plastid	20.41	16.53

Protein Annotations

MapMan:22.6.3.8	EntrezGene:8063678	UniProt:C5XCL9	ncoils:Coil	InterPro:Cullin_repeat-like_dom_sf	EnsemblPlants:EER96033
ProteinID:EER96033	ProteinID:EER96033.1	InterPro:Exo84	InterPro:Exo84_C	GO:GO:0000145	GO:GO:0001927
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006887
GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	GO:GO:0051601	PFAM:PF08700	PFAM:PF16528
PANTHER:PTHR21426	PANTHER:PTHR21426:SF14	EnsemblPlantsGene:SORBI_3002G070300	SUPFAM:SSF74788	UniParc:UPI0001A838CB	RefSeq:XP_002459512.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:7070051..7078767

Molecular Weight (calculated)

85326.2 Da

IEP (calculated)

4.996

GRAVY (calculated)

-0.197

Length

784 amino acids

Sequence
(BLAST)

001: MASAKSSRSR PAGHSGVFPV GSAAAVGSGG GGGGGGGGGD GGVQLADKLK IFKTDNFDPD AYVQSKCQTM NEKEIRHLCS YLQDLKKASA EEMRRSVYAN
101: YAAFIRTSKE ISDLEGELLS IRNLLNTQAA LIHGLSEGVQ IDSLTSGPEG SVEDGISNVE DQEPSEIQKW SADFPDMLDV LLAERRVDEA LDALDEAERV
201: AVDAKRKQTL TAAEVLALRR SISDNRQRLA DQLAEAACQS STRGIELRAA ASALKRLGDG PRAHSLLLSA HNQRLQCNMQ TIHPSSTSYG GAYTAALAQQ
301: VFSVIAQALS DSVDVFGDES CYASELVTWA TKQVLSFALL VKRHVLSSCA ASGGLRAAAE CVQISLGHCS LLEARGLSVS SVLLKQFKPS LEQALDANLR
401: RIEESTAALA AADNWILTYP TTGTRPLTRS SAANLALQPK LSSSAHRFNS MVQDFFEDVA PLLSLQLGGS TMDGITQIFN SYVNLLISAL PGSMDDEANL
501: DGLGNKIVRM AETEEQQLAL LANASLLAEE LLPRAAMKLS SINQSMDDLR KRGTDKQNRV PEQREWKRKL QRMVDRLRDS FCRQHALELI FTDEGDTHLS
601: AEMYISMDNT VEEPEWVPSP IFQELYAKLN RMASIAAEMF VGRERFATLL MMRLTETVIL WLSEDQAFWE EIEQGAKPLG PLGLQQFYLD MQFVIIFGQG
701: RFLSRHVHQV ILDVIDRAMA AFSATGMNPD SVLPGDDWFM DVSQEIVSMI SGRGRAANGD REVNSPTASV SAHSMSSFKS HGSS

Best Arabidopsis Sequence Match ( AT5G49830.1 )
(BLAST)

001: MAAKTARSKA TPTKENGVRV EEGLSLFKSD KFDADAYVQS KCSINEKDIK QLCSYLLDLK RASAEEMRRS VYANYPAFIR TSKEISDLEG ELSSIRNLLS
101: TQATLIHGLA DGVNIDDDKV SDESLANGLL NFEDNGLSDL EKWATEFPDH LDALLAERRV DEALAAFDEG EILVSQANEK HTLSSSVLSS LQFAIAERKQ
201: KLADQLAKAA CQPSTRGGEL RSAIAALKRL GDGPRAHTVL LDAHFQRYQY NMQSLRPSST SYGGAYTAAL SQLVFSAISQ ASSDSLGIFG KEPAYSSELV
301: TWATKQTEAF SLLVKRHALA SSAAAGGLRA AAECAQIALG HCSLLEARGL SLCPVLLKHF KPIVEQALEA NLKRIEENTA AMAAADDWVL TSPPAGSRHA
401: STAFQNKLTS SAHRFNLMVQ DFFEDVGPLL SMQLGSKALE GLFRVFNSYV DVLVRALPGS IEEEDPNFES SCNKIVQMAE TEANQLALLA NASLLADELL
501: PRAAMKLSLD QTGQRTDDLR RPLDRQNRNP EQREWKRRLL STVDKLKDAF CRQHALDLIF TEEGDSHLSA DMYVNIDENG EDVDFFPSLI FQELFAKLNR
601: MASLAADMFV GRERFAISLL MRLTETVILW LSGDQSFWDD IEEGPRPLGP LGLRQLYLDM KFVICFASQG RYLSRNLHRG TNEIISKALA AFTATGIDPY
701: SELPEDDWFN DICVDAMERL SGKTKGNNGD VHSPTASVSA QSVSSARSHG SY

Arabidopsis Description

EXO84BExocyst complex component 84B [Source:UniProtKB/TrEMBL;Acc:F4K7F5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.