Factsheet for Bra018442.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY20945	Canola	cytosol	98.81	98.81
AT1G10385.1	Thale cress	nucleus	93.65	93.9
VIT_01s0026g01230.t01	Wine grape	cytosol	58.07	63.72
KRH74737	Soybean	cytosol, plastid	62.57	63.07
KRH69407	Soybean	nucleus, plastid	62.3	62.8
Solyc04g005850.1.1	Tomato	cytosol	59.52	59.52
GSMUA_Achr2P12490_001	Banana	mitochondrion	59.66	57.97
GSMUA_Achr4P17210_001	Banana	mitochondrion	58.99	57.7
Bra037951.1-P	Field mustard	cytosol	52.51	57.2
EER96033	Sorghum	mitochondrion, plastid	58.07	55.99
Zm00001d019104_P001	Maize	mitochondrion	57.8	55.95
PGSC0003DMT400007390	Potato	cytosol	19.31	55.94
Zm00001d007760_P001	Maize	mitochondrion, plastid	57.41	55.78
HORVU2Hr1G052050.2	Barley	cytosol	50.4	55.78
Os07t0200000-01	Rice	plasma membrane	57.8	55.46
TraesCS2A01G244100.1	Wheat	mitochondrion, plastid	56.88	55.2
TraesCS2B01G263000.1	Wheat	mitochondrion, plastid	57.01	55.19
TraesCS2D01G242400.3	Wheat	mitochondrion, plastid	57.14	55.17
Zm00001d013049_P002	Maize	plastid	56.48	55.1
TraesCS5A01G453100.1	Wheat	mitochondrion	56.88	55.06
TraesCS5B01G462100.1	Wheat	mitochondrion	56.88	55.06
OQU90803	Sorghum	mitochondrion, plastid	56.35	54.9
Bra022506.1-P	Field mustard	nucleus	53.17	54.32
HORVU5Hr1G109160.2	Barley	mitochondrion	55.56	54.19
TraesCS5D01G463900.1	Wheat	mitochondrion	56.48	52.59
Os03t0804400-01	Rice	cytosol, mitochondrion, nucleus	43.25	51.01
HORVU2Hr1G099060.1	Barley	cytosol	5.42	48.24
Zm00001d035209_P001	Maize	extracellular, nucleus, peroxisome	15.61	36.65
GSMUA_Achr4P17220_001	Banana	extracellular	3.17	35.29
Bra018457.1-P	Field mustard	cytosol	24.74	24.04
GSMUA_Achr7P17120_001	Banana	cytosol	0.66	4.13

Protein Annotations

MapMan:22.6.3.8	EnsemblPlantsGene:Bra018442	EnsemblPlants:Bra018442.1	EnsemblPlants:Bra018442.1-P	ncoils:Coil	InterPro:Cullin_repeat-like_dom_sf
InterPro:Exo84	InterPro:Exo84_C	GO:GO:0000145	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150	GO:GO:0009987	UniProt:M4DPK1
PFAM:PF08700	PFAM:PF16528	PANTHER:PTHR21426	PANTHER:PTHR21426:SF15	SUPFAM:SSF74788	UniParc:UPI0002547F43
SEG:seg	:	:	:	:	:

Description

AT1G10385 (E=0.0) | FUNCTIONS IN: molecular_function unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Vps51/Vps67 (InterPro:IPR014812); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49830.1); Has 304 Blast hits to 243 proteins in 98 species: Archae - 0; Bacteria - 22; Metazoa - 141; Fungi - 74; Plants - 62; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).

Coordinates

chrA05:-:8243007..8246156

Molecular Weight (calculated)

83438.9 Da

IEP (calculated)

5.028

GRAVY (calculated)

-0.250

Length

756 amino acids

Sequence
(BLAST)

001: MEARTRGSMS SSIGGSEELE ANLTLSDRLK VFKGSTFDPE AYVTSKCQHM NEKETKHLTS YLVELKKASA EEMRKSVYAN YAAFIRTSKE ISALEGQLLS
101: MRNLLSAQAA LVHGLADGVH ISSLCADDAD DLTDQDLYNM DSKQLSKRET WVVEFFDRLE VLLAEKRVDE SMAALEEGRR VAMEAQEQRT LSPSTLLSLN
201: NEIKAKRQEL ADQLAEAIGQ PSTRGGELRS AVLSLKKLGD GSRAHTLLLK SYERRLQANI QSLRGSNTSY GVAFAAALSQ LVFSTIAQAA SDSLAVVGED
301: PSYSSELVTW AVKQAESFAL LLKRHTLASS AAAGSLRVTA ECIQLCASHC SSLESRGLAL SPVLLKHFRP GVEQALTGNL KRIEQSSAAL AASDDWSLAY
401: TPTGSRASSS TPTAPHLKLS ISAQRFNSMV QEFLEDAGPL DEALQLDGIA LDGVLQVFNA YVDLLINALP GSAENEENPV HRIVRIAETE SQQTALLVNA
501: LLLADELIPR SASRILPQGS TNQSTPRRGA SSDRQNRPEQ REWKKKLQRS VDRLRDSFCR QHALELIFTE EGEVRLSSEI YILMDETTEE PEWFPSPIFQ
601: ELFAKLTRIS TIVSDMFVGR ERFATILLMR LTETVILWIS DDQSFWEEME TGDKPLGPLG LQQFYLDMEF VMIFSSQGRY LSRNLHQVIK NIIARAIEAV
701: SATGLDPYTT LPEEEWFAEV AQIAIKMLTG KGNFGGHGER DVTSPSVSSA KSYTSN

Best Arabidopsis Sequence Match ( AT1G10385.1 )
(BLAST)

001: MEARERGSMS SSIGNSAELE GNLTLSDRLK VFKGSTFDPD AYVTSKCQRM NEKETRHLSS YLVELKKASA EEMRKSVYAN YAAFIRTSKE ISALEGQLLS
101: MRNLLSAQAA LVHGLADGVH ISSLCADDAD DLRDEDLYDM DNKQLSNIEN WVVEFFDRLE VLLAEKRVEE SMAALEEGRR VAVEAHEKRT LSPTTLLSLN
201: NAIKEKRQEL ADQLAEAISQ PSTRGGELRS AVLSLKKLGD GSRAHTLLLR SYERRLQANI QSLRASNTSY GVAFAAALSQ LVFSTIAQAA SDSQAVVGED
301: PAYTSELVTW AVKQAESFAL LLKRHTLASS AAAGSLRVTA ECVQLCASHC SSLESRGLAL SPVLLKHFRP GVEQALTGNL KRIEQSSAAL AASDDWSLSY
401: TPTGSRASST TPTAPHLKLS ISAQRFNSMV QEFLEDAGPL DEALQLDGIA LDGVLQVFNS YVDLLINALP GSAENEENPV HRIVKVAETE SQQTALLVNA
501: LLLADELIPR SASRILPQGT SQSTPRRGSS DRQNRPEQRE WKKKLQRSVD RLRDSFCRQH ALELIFTEEG EVRLSSEIYI LMDETTEEPE WFPSPIFQEL
601: FAKLTRIAMI VSDMFVGRER FATILLMRLT ETVILWISDD QSFWEEMETG DKPLGPLGLQ QFYLDMEFVM IFASQGRYLS RNLHQVIKNI IARAVEAVSA
701: TGLDPYSTLP EEEWFAEVAQ IAIKMLMGKG NFGGHGERDV TSPSVSSAKS YTSN

Arabidopsis Description

EXO84AExocyst complex component EXO84A [Source:UniProtKB/Swiss-Prot;Acc:F4I4B6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.