Factsheet for GSMUA_Achr7P17120_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P17220_001	Banana	extracellular	8.26	14.71
GSMUA_Achr4P17210_001	Banana	mitochondrion	5.79	0.91
HORVU5Hr1G109160.2	Barley	mitochondrion	5.79	0.9
OQU90803	Sorghum	mitochondrion, plastid	5.79	0.9
GSMUA_Achr2P12490_001	Banana	mitochondrion	5.79	0.9
TraesCS5B01G462100.1	Wheat	mitochondrion	5.79	0.9
TraesCS5A01G453100.1	Wheat	mitochondrion	5.79	0.9
TraesCS5D01G463900.1	Wheat	mitochondrion	5.79	0.86
VIT_01s0026g01230.t01	Wine grape	cytosol	4.13	0.73
AT1G10385.1	Thale cress	nucleus	4.13	0.66
Bra018442.1-P	Field mustard	cytosol	4.13	0.66
CDY20634	Canola	cytosol	4.13	0.66
CDY20945	Canola	cytosol	4.13	0.66
GSMUA_Achr7P17130_001	Banana	nucleus	3.31	0.59
KRH74737	Soybean	cytosol, plastid	2.48	0.4
KRH69407	Soybean	nucleus, plastid	2.48	0.4
PGSC0003DMT400007390	Potato	cytosol	0.83	0.38
Zm00001d035209_P001	Maize	extracellular, nucleus, peroxisome	0.83	0.31
Solyc04g005850.1.1	Tomato	cytosol	1.65	0.26
Os03t0804400-01	Rice	cytosol, mitochondrion, nucleus	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_Achr7P17120_001	EnsemblPlants:GSMUA_Achr7T17120_001	EnsemblPlantsGene:GSMUA_Achr7G17120_001	GO:GO:0000145	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150	GO:GO:0009987
InterPro:Exo84	PANTHER:PTHR21426	PANTHER:PTHR21426:SF2	SEG:seg	UniParc:UPI00029495BA	UniProt:M0TI99
MapMan:35.2	:	:	:	:	:

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G17120_001]

Coordinates

chr7:-:18598688..18599294

Molecular Weight (calculated)

12918.9 Da

IEP (calculated)

3.833

GRAVY (calculated)

-0.060

Length

121 amino acids

Sequence
(BLAST)

001: MHFIVEIAVC GGYSSRNVHQ LVSAVITRAI GAFSAKGIDP QSALPEDEWF VDAAKTAISK LMLGTSESEM SEPDEHMVVN SEISDSDESL SSPSIIESVD
101: SFASANMGET DSPVYFTDPE A

Best Arabidopsis Sequence Match ( AT1G10180.1 )
(BLAST)

001: MESSEEDDEY PFIESITPQS KIDSVHQSLT EKGIRKLCCE LMDLKDAVEN MCGDMRTKYL AFLRISEEAV EMEHELVELR KHISSQGILV QDLMAGVCRE
101: MDDWNRLPGD VHDAEVEEDP LPNEVTDPKS EFLEKIDLLL AEHKVDEALE AMDAEERSSP DLKGSVEMSS YKSAFMERKA VLEDQLLRIA KQPSICVAEL
201: KHALIGLIRL GKGPSAHQLL LKFYATSLRR RIEAFLPSCL TCPNTFPATL SKLVFSNISV ATKESAAMFG DDDNPAYSNK VVQWAEREVE YLVRLVKENA
301: SPSETASALR AASICLQDCL NYCKVLEPQG LFLSKLFLVL FRPYVEEVLE LNFRRARRVI FDLNETDEGL ESPSDFVTIL SEFAIASDTM MTDCSIRFMQ
401: IVQDILEQLT HLVVLHFGES VLTRILQLYD KYIDFLIKAL PGHSDEDGLP ELQDNTVLAR AETDSEQLAL LGAAFTILDE LLPRSLVKVW KLQIENGGGE
501: GENSAALNSS AAPELKEWKR HMVQAFDKLR NYFCLQFVLS FIYSREGLTR LDALIYLTET PDDLHLPSLP FQALFSKLQQ LAIIAGDVLL GKEKLQKILL
601: ARLTETVIIW LSNEQEFWSA FEDESNPLQP SGLQQLILDM NFTVEIARFA GYPFKVVQNH ASVVINRAIN IFSERGINPQ SSLPKTEWFT EAAKSAINRL
701: LMGSEDASEP EEYECEEEEE DDHHIVLPEM DDDSDSEDTS SLSTVDSFES FASASMADLE SPSFTDSES

Arabidopsis Description

EXO84CExocyst complex component EXO84C [Source:UniProtKB/Swiss-Prot;Acc:Q9SY60]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.