Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra018457.1-P | |
| Bra018558.1-P | plasma membrane |
| Bra018956.1-P | |
| Bra030396.1-P | |
| Bra036274.1-P | plasma membrane |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45950 | Canola | cytosol | 28.6 | 93.18 |
| CDY45948 | Canola | cytosol, nucleus, peroxisome | 35.92 | 85.48 |
| CDY13565 | Canola | nucleus | 65.3 | 71.0 |
| Bra003706.1-P | Field mustard | nucleus | 61.81 | 65.53 |
| AT1G76850.1 | Thale cress | nucleus | 60.94 | 64.13 |
| VIT_18s0072g00720.t01 | Wine grape | cytosol, plastid | 45.68 | 53.58 |
| Solyc12g056520.1.1 | Tomato | cytosol | 41.59 | 48.82 |
| Solyc04g071350.2.1 | Tomato | nucleus | 44.29 | 45.93 |
| KRH34989 | Soybean | endoplasmic reticulum | 43.5 | 45.91 |
| KRG91797 | Soybean | cytosol | 43.24 | 45.55 |
| Zm00001d036062_P001 | Maize | cytosol | 6.63 | 43.68 |
| HORVU2Hr1G074320.5 | Barley | cytosol, plastid | 38.01 | 43.64 |
| Zm00001d039959_P001 | Maize | cytosol | 6.19 | 42.01 |
| Os04t0421900-01 | Rice | plasma membrane | 39.84 | 41.51 |
| GSMUA_Achr6P25360_001 | Banana | cytosol | 39.84 | 41.25 |
| OQU81566 | Sorghum | nucleus | 38.8 | 40.53 |
| TraesCS2D01G298000.2 | Wheat | nucleus | 37.84 | 40.49 |
| TraesCS2A01G300100.3 | Wheat | nucleus | 37.75 | 40.24 |
| TraesCS2B01G316400.1 | Wheat | nucleus | 37.49 | 40.22 |
| PGSC0003DMT400027989 | Potato | nucleus | 4.88 | 27.05 |
Protein Annotations
| EnsemblPlants:Bra008282.1 | EnsemblPlants:Bra008282.1-P | EnsemblPlantsGene:Bra008282 | GO:GO:0000145 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006893 | GO:GO:0008150 | InterPro:EXOC2/Sec5 |
| PANTHER:PTHR13043 | PFAM:PF15469 | SEG:seg | UniParc:UPI00025460F4 | UniProt:M4CVN5 | MapMan:22.6.3.3 |
Description
AT1G76850 (E=3e-291) SEC5A | SEC5A (EXOCYST COMPLEX COMPONENT SEC5)
Coordinates
chrA02:+:14325129..14331965
Molecular Weight (calculated)
129090.0 Da
IEP (calculated)
6.176
GRAVY (calculated)
-0.394
Length
1147 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGINGECIED LKTNLLSKVH DEIQKMKIDM MKQFINLGET INHLAEIVRE MKAGDGRVNG GTASQPATRI MKGAADLQVP EESMELYDWI YGAPIFDVYD
0101: DEEPSYDVFD DAVPINGDED SSFLGFEYIE KNIQAMDSKI VEDSSFAPLP NKDIFKEFID VSHIEAVITR IWIQSVAHKT YGRSITAPTH PIQSHELPTS
0201: KPKMLNEEQP VPGKPPPLRD KKFTPSCVFR KGVLATSHSP PLRHNAILLI KPERVFQSRL VRQESYVESE KLPYFVSNLE DKLARRVRDM RESRTAPVVQ
0301: KLEDKVSEPG KKVVLTSLQS LPRVMECIDP LKLGIIDNKT LRLISESFGS PSKAEKVDNT LREKLIYFSD HLKLFLSRIH QDTSAADLEA GALGLKSDLK
0401: GRNLQRKQLV KDNFDCFISC KTTIDDIESK LKRIEEDPEG SGTTHVFNCM KSVTSRANLA FEPLFERQAQ AEKIRSVQGM LQRFRTLFNL PSIIRNSISK
0501: GEYDLAVREY KKAKSIALPS HVNILKRVLE EVEKVMLEFK GTLYKTMEDP KIDFTSLENT LRLLLELEPE SDPVWHYINV QNHRIHGLLE KCTYDHEARV
0601: ETLRNETRER AISDAKWQQI QQNVVPYSDA ASSTESNEVQ VDLQSVEFPS EEIDALKGRY IKIITGVLVH HIPAFWKTAL SVFSGKFAKS SQVTDTSANK
0701: SEEKVTEARF STHSLEEVAG MIRKGVNNTF CDFDESCILR PFMSNAIQEV SKACQAFEAK DSVPPQFGKV QAEITKIYIQ RLCSWMRAST ERISKEETWI
0801: PVSILERNKS PYAISYLPLA FRSVIVSGME QINLKQNSSS HSLVVVQASP ELYVVASKSS FSVGLSSVLV FTNDLQTRSS GSPFIGCCTD ISMFLGTSVS
0901: GFQDDCLSKV KLPNQKIEEM LISVRLAFLN CFLDFAAHLD QIGADLSTRE DWKNGYSDDQ QEVTSANTYG SVVDPHRRDL QDLIMSFSGL GEKVLEHYTF
1001: SKANLIRTAA TSYLLDSATQ PRLIKLYKET VLEIALESVS ESVETTPGHN RRPTRGSEDT ASDDRQGSSV SADELLVLTK QYSSELLQTE MERTSVNTAC
1101: FAESVPVEPT PPLLPKASYR GPMDSPSRNY RGKQSSGSPI HALPRRR
0101: DEEPSYDVFD DAVPINGDED SSFLGFEYIE KNIQAMDSKI VEDSSFAPLP NKDIFKEFID VSHIEAVITR IWIQSVAHKT YGRSITAPTH PIQSHELPTS
0201: KPKMLNEEQP VPGKPPPLRD KKFTPSCVFR KGVLATSHSP PLRHNAILLI KPERVFQSRL VRQESYVESE KLPYFVSNLE DKLARRVRDM RESRTAPVVQ
0301: KLEDKVSEPG KKVVLTSLQS LPRVMECIDP LKLGIIDNKT LRLISESFGS PSKAEKVDNT LREKLIYFSD HLKLFLSRIH QDTSAADLEA GALGLKSDLK
0401: GRNLQRKQLV KDNFDCFISC KTTIDDIESK LKRIEEDPEG SGTTHVFNCM KSVTSRANLA FEPLFERQAQ AEKIRSVQGM LQRFRTLFNL PSIIRNSISK
0501: GEYDLAVREY KKAKSIALPS HVNILKRVLE EVEKVMLEFK GTLYKTMEDP KIDFTSLENT LRLLLELEPE SDPVWHYINV QNHRIHGLLE KCTYDHEARV
0601: ETLRNETRER AISDAKWQQI QQNVVPYSDA ASSTESNEVQ VDLQSVEFPS EEIDALKGRY IKIITGVLVH HIPAFWKTAL SVFSGKFAKS SQVTDTSANK
0701: SEEKVTEARF STHSLEEVAG MIRKGVNNTF CDFDESCILR PFMSNAIQEV SKACQAFEAK DSVPPQFGKV QAEITKIYIQ RLCSWMRAST ERISKEETWI
0801: PVSILERNKS PYAISYLPLA FRSVIVSGME QINLKQNSSS HSLVVVQASP ELYVVASKSS FSVGLSSVLV FTNDLQTRSS GSPFIGCCTD ISMFLGTSVS
0901: GFQDDCLSKV KLPNQKIEEM LISVRLAFLN CFLDFAAHLD QIGADLSTRE DWKNGYSDDQ QEVTSANTYG SVVDPHRRDL QDLIMSFSGL GEKVLEHYTF
1001: SKANLIRTAA TSYLLDSATQ PRLIKLYKET VLEIALESVS ESVETTPGHN RRPTRGSEDT ASDDRQGSSV SADELLVLTK QYSSELLQTE MERTSVNTAC
1101: FAESVPVEPT PPLLPKASYR GPMDSPSRNY RGKQSSGSPI HALPRRR
0001: MSSDSNDLDE DELLQMALKE QAKRDLTYQK PPSSSARKPV ANLVQQPRQQ KPVAAAAAPP KKSAAAVRKP SMDEDEESEV ELLSISSGDD DLEREREIGG
0101: SSGGAGRGRG SDVREKGRAR KEDDGAWDGG EPDCWKRVNE AELARRVRDM RESRTAPVVQ KVEGKAPAPG KKVALTSLQS LPRGMECIDP LKLGIIDNKT
0201: LRLITESSGS PSKAEKVDNT LREKLVYFSD HFDPKLFLSR IHQDTTAADL EAGALGLKSD LKGRNLQRKQ LVKDNFDCFV SCKTTIDDIE SKLKRIEEDP
0301: EGSGTTHLFN CMKSVTSRAN LAFEPLFERQ AQAEKIRSVQ GMLQRFRTLF NLPSIIRSSI SKGEYDLAVR EYKKAKSIAL PSHVNILKRV LEEVEKVMLE
0401: FKGTLYKSME DPKIDFTSLE NTVRLLLELE PESDPVWHYL NVQNHRIHGL LEKCTYDHEA RVEILRNDTH EKAISDAKWQ QIQQNGVSYS DTASSNENNA
0501: VQVDLQSVEF PSEEIDILKG RYIKRLTAVL VHHIPVFWKT AISIFSGKFA KSSQVTDTSA NKAEEKVTEA RYSTHSLEEV AGMIRKTISV YEAKVNSTFC
0601: DFDESCILRP FMSDAINEVS KACQAFEAKE STPHSAVVAL RKIQAEITKI YIQRLCSWMR ASTEGISKEE TWIPVSILER NRSPYAISYL PLAFRSVIVS
0701: GMEQVNLMIL SVKSEAAKSE DMFAQIEEII ISVRLAFLNC FLDFAAHLEQ IGADLSQSTS RQDNWKNGYS DEHQEEPSAN TYGSVIDPHR RLLMVLSNIG
0801: YCKDELASEL YNKFKYTWLQ SRDKNEDSSD LQDLIMSFSG LGEKVLEHYT FAKANLIRTA ATNYLLDSGI QWGSAPQVKG IRDAAVELLH TLVAVHAEVF
0901: AGAKPLLDKI LGVLIEGLID TFLSVVEENR SSDLRSIDAN GFCQLMFELE YFETVLYSYF TSAATESLKS LQGTVLEIAI ESISEAVETP GHNRRPTRGS
1001: EDTVSDDKQS VSADDLLALT KQCSNELLQQ ELERTRVNTA CFAESAPLES TPPLPKATYS SFRGSMDSPS RNYRGSQSSG SPINARPRRR
0101: SSGGAGRGRG SDVREKGRAR KEDDGAWDGG EPDCWKRVNE AELARRVRDM RESRTAPVVQ KVEGKAPAPG KKVALTSLQS LPRGMECIDP LKLGIIDNKT
0201: LRLITESSGS PSKAEKVDNT LREKLVYFSD HFDPKLFLSR IHQDTTAADL EAGALGLKSD LKGRNLQRKQ LVKDNFDCFV SCKTTIDDIE SKLKRIEEDP
0301: EGSGTTHLFN CMKSVTSRAN LAFEPLFERQ AQAEKIRSVQ GMLQRFRTLF NLPSIIRSSI SKGEYDLAVR EYKKAKSIAL PSHVNILKRV LEEVEKVMLE
0401: FKGTLYKSME DPKIDFTSLE NTVRLLLELE PESDPVWHYL NVQNHRIHGL LEKCTYDHEA RVEILRNDTH EKAISDAKWQ QIQQNGVSYS DTASSNENNA
0501: VQVDLQSVEF PSEEIDILKG RYIKRLTAVL VHHIPVFWKT AISIFSGKFA KSSQVTDTSA NKAEEKVTEA RYSTHSLEEV AGMIRKTISV YEAKVNSTFC
0601: DFDESCILRP FMSDAINEVS KACQAFEAKE STPHSAVVAL RKIQAEITKI YIQRLCSWMR ASTEGISKEE TWIPVSILER NRSPYAISYL PLAFRSVIVS
0701: GMEQVNLMIL SVKSEAAKSE DMFAQIEEII ISVRLAFLNC FLDFAAHLEQ IGADLSQSTS RQDNWKNGYS DEHQEEPSAN TYGSVIDPHR RLLMVLSNIG
0801: YCKDELASEL YNKFKYTWLQ SRDKNEDSSD LQDLIMSFSG LGEKVLEHYT FAKANLIRTA ATNYLLDSGI QWGSAPQVKG IRDAAVELLH TLVAVHAEVF
0901: AGAKPLLDKI LGVLIEGLID TFLSVVEENR SSDLRSIDAN GFCQLMFELE YFETVLYSYF TSAATESLKS LQGTVLEIAI ESISEAVETP GHNRRPTRGS
1001: EDTVSDDKQS VSADDLLALT KQCSNELLQQ ELERTRVNTA CFAESAPLES TPPLPKATYS SFRGSMDSPS RNYRGSQSSG SPINARPRRR
Arabidopsis Description
SEC5AExocyst complex component SEC5A [Source:UniProtKB/Swiss-Prot;Acc:Q8S3U9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.