Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
18260611
plasma membrane: 27800704 plasma membrane: 28056797 |
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID:
28056797
doi
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os01t0351300-01 | plasma membrane |
| Os01t0675000-01 | |
| Os01t0760300-01 | |
| Os05t0560100-01 | |
| Os07t0568000-01 | |
| Os11t0171500-01 | |
| Os12t0169800-00 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d051026_P001 | Maize | cytosol | 9.45 | 90.43 |
| OQU81566 | Sorghum | nucleus | 84.56 | 84.79 |
| TraesCS2D01G298000.2 | Wheat | nucleus | 81.93 | 84.14 |
| TraesCS2B01G316400.1 | Wheat | nucleus | 81.29 | 83.72 |
| TraesCS2A01G300100.3 | Wheat | nucleus | 81.29 | 83.18 |
| HORVU2Hr1G074320.5 | Barley | cytosol, plastid | 74.75 | 82.38 |
| Zm00001d025398_P005 | Maize | nucleus | 83.83 | 81.68 |
| Zm00001d003713_P006 | Maize | nucleus | 80.84 | 78.14 |
| GSMUA_Achr6P25360_001 | Banana | cytosol | 66.48 | 66.06 |
| VIT_18s0072g00720.t01 | Wine grape | cytosol, plastid | 56.31 | 63.39 |
| CDY45948 | Canola | cytosol, nucleus, peroxisome | 26.43 | 60.37 |
| KRH34989 | Soybean | endoplasmic reticulum | 57.04 | 57.77 |
| Solyc12g056520.1.1 | Tomato | cytosol | 51.23 | 57.73 |
| CDY13565 | Canola | nucleus | 55.04 | 57.44 |
| KRG91797 | Soybean | cytosol | 56.58 | 57.21 |
| AT1G76850.1 | Thale cress | nucleus | 56.04 | 56.61 |
| Bra003706.1-P | Field mustard | nucleus | 55.49 | 56.47 |
| CDX68084 | Canola | nucleus | 55.31 | 56.39 |
| CDX85974 | Canola | nucleus | 55.4 | 56.38 |
| AT1G21170.2 | Thale cress | nucleus | 56.13 | 56.23 |
| Solyc04g071350.2.1 | Tomato | nucleus | 56.04 | 55.79 |
| PGSC0003DMT400061943 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 10.54 | 53.95 |
| VIT_18s0072g00740.t01 | Wine grape | nucleus | 5.72 | 43.75 |
| PGSC0003DMT400027989 | Potato | nucleus | 7.99 | 42.51 |
| Bra008282.1-P | Field mustard | cytosol | 41.51 | 39.84 |
| CDY45950 | Canola | cytosol | 12.44 | 38.92 |
| CDY45951 | Canola | extracellular | 5.54 | 38.36 |
| CDY04603 | Canola | cytosol | 2.45 | 27.0 |
Protein Annotations
| MapMan:22.6.3.3 | EntrezGene:4335834 | EMBL:AK066958 | ProteinID:BAF14701.2 | ProteinID:BAS89198.1 | ncoils:Coil |
| InterPro:Cullin_repeat-like_dom_sf | InterPro:EXOC2/Sec5 | GO:GO:0000145 | GO:GO:0001927 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006893 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0016043 | EnsemblPlantsGene:Os04g0421900 | EnsemblPlants:Os04t0421900-01 | PFAM:PF15469 | PANTHER:PTHR13043 | UniProt:Q0JD86 |
| SUPFAM:SSF74788 | UniParc:UPI000021CA0B | RefSeq:XP_015635927.1 | SEG:seg | : | : |
Description
EXOCYST COMPLEX COMPONENT SEC5Similar to H0525E10.11 protein. (Os04t0421900-01)
Coordinates
chr4:+:20862593..20872470
Molecular Weight (calculated)
122753.0 Da
IEP (calculated)
5.859
GRAVY (calculated)
-0.511
Length
1101 amino acids
Sequence
(BLAST)
(BLAST)
0001: MASDSDVDED ELLQMALQEQ AARDLSHQRP AGAGKPVVNL VRPPANSSRG GGGGGRGGGG PAKARQPSRG GGDDDDDDSE VEMLSISSGD EDGAPSSRDR
0101: GPPPPRGGGR AGARRAASRD DGDFDDDEPR SWKRVDEAEL ARRVREMREG GAAPTVDQKA AAAATRKALT NVQTLPRGVE VLDPLGLGVI DNKSLRLITD
0201: ASVSSPVSRE KAQGLDPSMR EKVIYSSPNF DPKVFLSWVH KDTSAADLES GALTLKTDLK GRTQQKKQLV KENFDCFVSC KTTIDDIESK LRQIEEDPEG
0301: AGTAHLYSVT QKISGVANRA FEPLFERQAQ AEKIRSVQGM LQRFRTLFNL PSAIRGNIRK GEYDLAVREY QKAKSIVLPS HVGILKRVLE EVEKVMQEFR
0401: GMLYKSMEDP HLDLAELENI VRLLLELEPE TDPVWHYLNI QNSRIHGLFE KCTLDHEARM EVLQNKIREK ILSDAKWRQL QQDSNKSLEV DSATGDSFQD
0501: DQLSTNIMAD EADSLRAAYI RRLTAVLIQH VPAFWRLALS VFSGKFAKAA AGNVLSDSDM NTKQSVNKTD DKGGEAKYTN HTLDEVASMV RATVSAFDTK
0601: VQNTFRDFEE CNILRPFMGD TIKEIAKACL TLEGKDSSPT AVKMLRALHY EITKLYILRL CSWMRATTKE ISKYETWFTL TTLERNKSLY AISSMPLEFR
0701: DIIVSAMDRI DFMVLNLRSE TAKSYDISQH LHEIHESVRL AFLNSFLDFA GYLERFGGEL AQNRSNKENN HTQNGYVNGT NSETSAGMDG DLYKKLLVVL
0801: SNIGYCKAEL SDELYTKYRH IWSPVRDNDE RSADMRDLMT SFSALEEKVL EQYTFAKSNL IRNAARNYLL DYGIHWGAAP AVKGIRDAAL DLLHILVAVH
0901: AEVYSGARPL LEKAMTILVE GLIDIFLSIF HENKTKELRM LDANGFCQLM LELEYFETIL RTYLSTEAEQ ALRSLQENLL EKACESVTEA LENPGHHRRP
1001: TRGSEDAASD DRQSVSPDDL LALAQQCSSD LLQGELEKTR LNIACFMEST LQSTPAPAGS KPAAYQSYKA PATHQPVQVS SPSFRRQQTS TNSPAASRRR
1101: R
0101: GPPPPRGGGR AGARRAASRD DGDFDDDEPR SWKRVDEAEL ARRVREMREG GAAPTVDQKA AAAATRKALT NVQTLPRGVE VLDPLGLGVI DNKSLRLITD
0201: ASVSSPVSRE KAQGLDPSMR EKVIYSSPNF DPKVFLSWVH KDTSAADLES GALTLKTDLK GRTQQKKQLV KENFDCFVSC KTTIDDIESK LRQIEEDPEG
0301: AGTAHLYSVT QKISGVANRA FEPLFERQAQ AEKIRSVQGM LQRFRTLFNL PSAIRGNIRK GEYDLAVREY QKAKSIVLPS HVGILKRVLE EVEKVMQEFR
0401: GMLYKSMEDP HLDLAELENI VRLLLELEPE TDPVWHYLNI QNSRIHGLFE KCTLDHEARM EVLQNKIREK ILSDAKWRQL QQDSNKSLEV DSATGDSFQD
0501: DQLSTNIMAD EADSLRAAYI RRLTAVLIQH VPAFWRLALS VFSGKFAKAA AGNVLSDSDM NTKQSVNKTD DKGGEAKYTN HTLDEVASMV RATVSAFDTK
0601: VQNTFRDFEE CNILRPFMGD TIKEIAKACL TLEGKDSSPT AVKMLRALHY EITKLYILRL CSWMRATTKE ISKYETWFTL TTLERNKSLY AISSMPLEFR
0701: DIIVSAMDRI DFMVLNLRSE TAKSYDISQH LHEIHESVRL AFLNSFLDFA GYLERFGGEL AQNRSNKENN HTQNGYVNGT NSETSAGMDG DLYKKLLVVL
0801: SNIGYCKAEL SDELYTKYRH IWSPVRDNDE RSADMRDLMT SFSALEEKVL EQYTFAKSNL IRNAARNYLL DYGIHWGAAP AVKGIRDAAL DLLHILVAVH
0901: AEVYSGARPL LEKAMTILVE GLIDIFLSIF HENKTKELRM LDANGFCQLM LELEYFETIL RTYLSTEAEQ ALRSLQENLL EKACESVTEA LENPGHHRRP
1001: TRGSEDAASD DRQSVSPDDL LALAQQCSSD LLQGELEKTR LNIACFMEST LQSTPAPAGS KPAAYQSYKA PATHQPVQVS SPSFRRQQTS TNSPAASRRR
1101: R
0001: MSSSDDLDED ELLQMALKEQ SQRDVTYQKP PSANSRKPVT NLVQQPRRQK RAAAPPSKGG AKASRKPSMD EDDESEVELL SISSGDEDEG NDRGRGGGGD
0101: GGGGRGRGGS GKERGRARKE DDRAWDGVEP DCWKRVNEAE LARKVRDMRE SRTAPSVTQN LDRKVSGADK KVVLTSLQSF PRGMECIDPL KLGIIDNKTL
0201: RLITESSESL SKAEKVDNAL REKLVYTSDH FDPKLFISRI HQETSAADLE SGALALKSDL KGRNLQRKQL VKDNFDCFVS CKTTIDDIES KLKRIEDDPD
0301: GSGTTHLFNC MKSVTSRANR AFEPLFERQA QAEKIRSVQG MLQRFRTLFN LPSIIRSSIS KGEYDLAVRE YKKAKSIALP SHVNLLKRVL EEVEKVMQEF
0401: KGTLYRSMED PKIDFTSLEN TVRLLLELEP ESDPVWHYLN VQNHRIHGML EKCTFDHEAR MEILRNQVHE RALSDAKWRQ IQQNGVQLSD DTSSMEDNQV
0501: QVDQPLEESA RREKDALRGR YIKILTAVIV YHLPTFWKTA LSVFTGKFAK SSQVNDTSAS KAEEKAEEAR YSSHSLEEIA GMIRNTISVY EAKVQSTFHD
0601: FDESYILHPY MSDTIKEVSK ACQAFEAKES APHSAVMALR KVKVEITKIY IQRLCSWMRA STEEISKEET WIPVSILERN RSPYSISYLP LAFRSIIVSG
0701: MEQINMMILS LKGEAARSED MFAHIEEILI SVRLAFLNCF LDFAAHLEQI GADLSQRTTK RESWQNGYSN DHQEEQSINA PESVVDPHRQ LLMILSNIGY
0801: CKDELASELY NKYKYTWLQS RRNDEDISDL QDLMMSFSGL GEKVLEHYTF AKANLIRTAA TNYLLDSGIQ WGAAPPVKGI RDAAVELLHT LVAVHAEVFA
0901: GAKPLLDKIL GTLVEGLIDT FLSLLDENRS DDLSSIDANG FCQLMLELEY FETILKPYLT VDATESLKSL QGAVLEKAIE SISETVENNP GGHQRKPTRG
1001: SEDAISDDKQ SSVSPDDLLA LAQQCTSGML QLELEKTRLN SACFIETIPL DPVPPVAKAA YSRTSTDSPS RNYRESQPMG SPVQARPRRR
0101: GGGGRGRGGS GKERGRARKE DDRAWDGVEP DCWKRVNEAE LARKVRDMRE SRTAPSVTQN LDRKVSGADK KVVLTSLQSF PRGMECIDPL KLGIIDNKTL
0201: RLITESSESL SKAEKVDNAL REKLVYTSDH FDPKLFISRI HQETSAADLE SGALALKSDL KGRNLQRKQL VKDNFDCFVS CKTTIDDIES KLKRIEDDPD
0301: GSGTTHLFNC MKSVTSRANR AFEPLFERQA QAEKIRSVQG MLQRFRTLFN LPSIIRSSIS KGEYDLAVRE YKKAKSIALP SHVNLLKRVL EEVEKVMQEF
0401: KGTLYRSMED PKIDFTSLEN TVRLLLELEP ESDPVWHYLN VQNHRIHGML EKCTFDHEAR MEILRNQVHE RALSDAKWRQ IQQNGVQLSD DTSSMEDNQV
0501: QVDQPLEESA RREKDALRGR YIKILTAVIV YHLPTFWKTA LSVFTGKFAK SSQVNDTSAS KAEEKAEEAR YSSHSLEEIA GMIRNTISVY EAKVQSTFHD
0601: FDESYILHPY MSDTIKEVSK ACQAFEAKES APHSAVMALR KVKVEITKIY IQRLCSWMRA STEEISKEET WIPVSILERN RSPYSISYLP LAFRSIIVSG
0701: MEQINMMILS LKGEAARSED MFAHIEEILI SVRLAFLNCF LDFAAHLEQI GADLSQRTTK RESWQNGYSN DHQEEQSINA PESVVDPHRQ LLMILSNIGY
0801: CKDELASELY NKYKYTWLQS RRNDEDISDL QDLMMSFSGL GEKVLEHYTF AKANLIRTAA TNYLLDSGIQ WGAAPPVKGI RDAAVELLHT LVAVHAEVFA
0901: GAKPLLDKIL GTLVEGLIDT FLSLLDENRS DDLSSIDANG FCQLMLELEY FETILKPYLT VDATESLKSL QGAVLEKAIE SISETVENNP GGHQRKPTRG
1001: SEDAISDDKQ SSVSPDDLLA LAQQCTSGML QLELEKTRLN SACFIETIPL DPVPPVAKAA YSRTSTDSPS RNYRESQPMG SPVQARPRRR
Arabidopsis Description
SEC5BExocyst complex component SEC5 [Source:TAIR;Acc:AT1G21170]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.